org.janelia.saalfeldlab.n5.universe.metadata

Class N5CosemMetadata.CosemTransform

java.lang.Object

org.janelia.saalfeldlab.n5.universe.metadata.N5CosemMetadata.CosemTransform

Enclosing class:

N5CosemMetadata

public static class N5CosemMetadata.CosemTransform
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
String[]	axes
static String	KEY
String	ordering
double[]	scale
double[]	translate
String[]	units

Constructor Summary

Constructors

Constructor and Description
CosemTransform(String[] axes, double[] scale, double[] translate, String[] units)
CosemTransform(String[] axes, double[] scale, double[] translate, String[] units, String ordering)

Method Summary

Modifier and Type	Method and Description
Axis[]	buildAxes()
double[]	fOrderedScale()
double[]	fOrderedTranslation()
net.imglib2.realtransform.AffineGet	getAffine()
net.imglib2.realtransform.AffineTransform3D	toAffineTransform3d()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

KEY

public static final transient String KEY

See Also:

Constant Field Values

axes

public final String[] axes

scale

public final double[] scale

translate

public final double[] translate

units

public final String[] units

ordering

public final String ordering

Constructor Detail

CosemTransform

public CosemTransform(String[] axes,
                      double[] scale,
                      double[] translate,
                      String[] units,
                      String ordering)

CosemTransform

public CosemTransform(String[] axes,
                      double[] scale,
                      double[] translate,
                      String[] units)

Method Detail

getAffine

public net.imglib2.realtransform.AffineGet getAffine()

toAffineTransform3d

public net.imglib2.realtransform.AffineTransform3D toAffineTransform3d()

fOrderedScale

public double[] fOrderedScale()

Returns:

scale with fortran ordering (x, y, z)

fOrderedTranslation

public double[] fOrderedTranslation()

Returns:

translation with fortran ordering (x, y, z)

buildAxes

public Axis[] buildAxes()