Hierarchy For All Packages

Package Hierarchies:

• loci.formats,
• loci.formats.cache,
• loci.formats.codec,
• loci.formats.dicom,
• loci.formats.gui,
• loci.formats.in,
• loci.formats.out,
• loci.formats.services,
• loci.formats.tiff,
• loci.formats.tools

Class Hierarchy

• java.lang.Object
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
        • loci.formats.tiff.IFDList
  • java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
    • java.util.HashMap<K,V> (implements java.lang.Cloneable, java.util.Map<K,V>, java.io.Serializable)
      • loci.formats.tiff.IFD
  • loci.common.services.AbstractService (implements loci.common.services.Service)
    • loci.formats.services.EXIFServiceImpl (implements loci.formats.services.EXIFService)
    • loci.formats.services.JAIIIOServiceImpl (implements loci.formats.services.JAIIIOService)
    • loci.formats.services.JHDFServiceImpl (implements loci.formats.services.JHDFService)
    • loci.formats.services.JPEGXRServiceImpl (implements loci.formats.services.JPEGXRService)
  • loci.formats.tools.AmiraParameters
  • loci.formats.tools.AsciiImage
  • loci.formats.gui.AWTImageTools
  • loci.formats.AxisGuesser
  • loci.formats.codec.BaseCodec (implements loci.formats.codec.Codec)
    • loci.formats.codec.Base64Codec
    • loci.formats.codec.HuffmanCodec
    • loci.formats.codec.JPEG2000Codec
    • loci.formats.codec.JPEGCodec
    • loci.formats.codec.JPEGXRCodec
    • loci.formats.codec.LosslessJPEGCodec
    • loci.formats.codec.LZOCodec
    • loci.formats.codec.LZWCodec
    • loci.formats.codec.MJPBCodec
    • loci.formats.codec.MSRLECodec
    • loci.formats.codec.MSVideoCodec
    • loci.formats.codec.NikonCodec
    • loci.formats.codec.PackbitsCodec
    • loci.formats.codec.PassthroughCodec
    • loci.formats.codec.QTRLECodec
    • loci.formats.codec.RPZACodec
    • loci.formats.codec.TargaRLECodec
    • loci.formats.codec.ZlibCodec
    • loci.formats.codec.ZstdCodec
  • loci.formats.tools.BioFormatsExtensionPrinter
  • loci.formats.codec.BitBuffer
  • loci.formats.codec.BitWriter
  • loci.formats.gui.BufferedImageSource (implements loci.formats.cache.ICacheSource)
  • loci.formats.codec.ByteVector
  • loci.formats.cache.Cache (implements loci.formats.cache.CacheReporter)
  • loci.formats.tools.CacheConsole
  • loci.formats.cache.CacheEvent
  • loci.formats.cache.CacheSource (implements loci.formats.cache.ICacheSource)
    • loci.formats.cache.ByteArraySource
  • loci.formats.cache.CacheStrategy (implements loci.formats.cache.CacheReporter, java.util.Comparator<T>, loci.formats.cache.ICacheStrategy)
    • loci.formats.cache.CrosshairStrategy
    • loci.formats.cache.RectangleStrategy
  • loci.formats.in.CellH5Reader.CellH5Constants
  • loci.formats.in.CellH5Reader.CellH5Coordinate
  • loci.formats.codec.CodecOptions
    • loci.formats.codec.HuffmanCodecOptions
    • loci.formats.codec.JPEG2000CodecOptions
    • loci.formats.codec.MJPBCodecOptions
    • loci.formats.codec.NikonCodecOptions
  • java.awt.image.ColorModel (implements java.awt.Transparency)
    • loci.formats.gui.Index16ColorModel
    • loci.formats.gui.SignedColorModel
    • loci.formats.gui.UnsignedIntColorModel
  • java.awt.color.ColorSpace (implements java.io.Serializable)
    • loci.formats.gui.TwoChannelColorSpace
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • loci.formats.gui.CacheIndicator (implements loci.formats.cache.CacheListener)
        • javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • javax.swing.tree.DefaultTreeCellRenderer (implements javax.swing.tree.TreeCellRenderer)
            • loci.formats.gui.XMLCellRenderer
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • loci.formats.gui.CacheComponent (implements java.awt.event.ActionListener, loci.formats.cache.CacheListener, javax.swing.event.ChangeListener)
          • loci.formats.gui.PreviewPane (implements java.beans.PropertyChangeListener, java.lang.Runnable)
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Frame (implements java.awt.MenuContainer)
          • javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • loci.formats.gui.DataConverter (implements java.awt.event.ActionListener, javax.swing.event.ChangeListener, java.lang.Runnable)
            • loci.formats.tools.EditTiffG (implements java.awt.event.ActionListener)
            • loci.formats.gui.ImageViewer (implements java.awt.event.ActionListener, javax.swing.event.ChangeListener, java.awt.event.KeyListener, java.awt.event.MouseMotionListener, java.lang.Runnable, java.awt.event.WindowListener)
            • loci.formats.gui.XMLWindow
  • loci.formats.CoreMetadata (implements java.lang.Cloneable)
    • loci.formats.SwappableMetadata
  • java.awt.image.DataBuffer
    • loci.formats.gui.SignedByteBuffer
    • loci.formats.gui.SignedShortBuffer
    • loci.formats.gui.UnsignedIntBuffer
  • loci.formats.dicom.DicomFileInfo (implements java.lang.Comparable<T>)
  • loci.formats.dicom.DicomJSONProvider (implements loci.formats.dicom.ITagProvider)
  • loci.formats.dicom.DicomTag (implements java.lang.Comparable<T>)
  • loci.formats.dicom.DicomTile
  • loci.formats.tools.FakeImage
  • javax.swing.filechooser.FileFilter
    • loci.formats.gui.ComboFileFilter (implements java.lang.Comparable<T>, java.io.FileFilter)
    • loci.formats.gui.ExtensionFileFilter (implements java.lang.Comparable<T>, java.io.FileFilter)
    • loci.formats.gui.FormatFileFilter (implements java.lang.Comparable<T>, java.io.FileFilter)
    • loci.formats.gui.NoExtensionFileFilter (implements java.lang.Comparable<T>, java.io.FileFilter)
  • loci.formats.FilePattern
  • loci.formats.FilePatternBlock
  • loci.formats.FormatHandler (implements loci.formats.IFormatHandler)
    • loci.formats.FormatReader (implements loci.formats.IFormatReader)
      • loci.formats.in.APNGReader
      • loci.formats.in.AVIReader
      • loci.formats.in.BDVReader
      • loci.formats.in.BIFormatReader
        • loci.formats.in.ImageIOReader
          • loci.formats.in.JPEGReader.DefaultJPEGReader
        • loci.formats.in.MNGReader
        • loci.formats.in.TiffJAIReader
      • loci.formats.in.BMPReader
      • loci.formats.in.CellH5Reader
      • loci.formats.DelegateReader
        • loci.formats.in.JPEGReader
        • loci.formats.in.TiffDelegateReader
      • loci.formats.in.EPSReader
      • loci.formats.in.FakeReader
      • loci.formats.in.FitsReader
      • loci.formats.in.FlowSightReader
      • loci.formats.in.GIFReader
      • loci.formats.in.ICSReader
      • loci.formats.in.IM3Reader
      • loci.formats.in.JPEG2000Reader
      • loci.formats.in.KLBReader
      • loci.formats.in.MicromanagerReader
      • loci.formats.in.NRRDReader
      • loci.formats.in.OBFReader
      • loci.formats.in.OMEXMLReader
      • loci.formats.in.PCXReader
      • loci.formats.in.PGMReader
      • loci.formats.in.PictReader
      • loci.formats.in.QTReader
      • loci.formats.in.SlideBook7Reader
      • loci.formats.SubResolutionFormatReader
        • loci.formats.in.DicomReader
        • loci.formats.in.MinimalTiffReader
          • loci.formats.in.BaseTiffReader
            • loci.formats.in.TiffReader
        • loci.formats.in.OMETiffReader
      • loci.formats.in.TextReader
      • loci.formats.in.TileJPEGReader
      • loci.formats.WrappedReader
        • loci.formats.in.FilePatternReader
      • loci.formats.in.ZipReader
    • loci.formats.FormatWriter (implements loci.formats.IFormatWriter)
      • loci.formats.out.APNGWriter
      • loci.formats.out.AVIWriter
      • loci.formats.out.CellH5Writer
      • loci.formats.out.DicomWriter (implements loci.formats.out.IExtraMetadataWriter)
      • loci.formats.out.EPSWriter
      • loci.formats.out.ICSWriter
      • loci.formats.out.ImageIOWriter
        • loci.formats.out.JPEGWriter
      • loci.formats.out.JavaWriter
      • loci.formats.out.JPEG2000Writer
      • loci.formats.out.OMEXMLWriter
      • loci.formats.out.QTWriter
      • loci.formats.out.TiffWriter
        • loci.formats.out.OMETiffWriter
          • loci.formats.out.PyramidOMETiffWriter
      • loci.formats.out.V3DrawWriter
  • loci.formats.gui.GUITools
  • loci.formats.in.IM3Reader.IM3Record
    • loci.formats.in.IM3Reader.BooleanIM3Record
    • loci.formats.in.IM3Reader.ContainerRecord
    • loci.formats.in.IM3Reader.FloatIM3Record
    • loci.formats.in.IM3Reader.IntIM3Record
    • loci.formats.in.IM3Reader.StringIM3Record
  • loci.formats.in.IM3Reader.Spectrum
  • loci.formats.ImageTools
  • loci.formats.in.JPEG2000MetadataParser
  • loci.formats.codec.JPEGTileDecoder (implements java.lang.AutoCloseable)
  • loci.formats.services.JPEGTurboServiceImpl (implements loci.formats.services.JPEGTurboService)
  • loci.formats.tools.MakeTestOmeTiff
  • loci.formats.Memoizer.KryoDeser (implements loci.formats.Memoizer.Deser)
  • java.lang.Number (implements java.io.Serializable)
    • loci.formats.tiff.TiffRational (implements java.lang.Comparable<T>)
  • loci.formats.NumberFilter (implements java.io.FileFilter)
  • loci.formats.tiff.OnDemandLongArray
  • loci.formats.ReaderWrapper (implements loci.formats.IFormatReader)
    • loci.formats.gui.BufferedImageReader
    • loci.formats.ChannelFiller
    • loci.formats.ChannelMerger
    • loci.formats.ChannelSeparator
    • loci.formats.DimensionSwapper
    • loci.formats.FileStitcher
    • loci.formats.Memoizer
    • loci.formats.MinMaxCalculator
  • loci.formats.ResourceNamer
  • java.lang.Thread (implements java.lang.Runnable)
    • loci.formats.cache.CacheUpdater
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • loci.formats.FormatException
        • loci.formats.cache.CacheException
      • java.lang.RuntimeException
        • java.lang.IllegalArgumentException
          • loci.formats.IllegalBlockException
  • loci.formats.tiff.TiffConstants
  • loci.formats.tiff.TiffIFDEntry (implements java.lang.Comparable<T>)
  • loci.formats.tiff.TiffParser (implements java.io.Closeable)
  • loci.formats.tiff.TiffSaver (implements java.io.Closeable)
  • loci.formats.tools.UpgradeCheck
  • loci.formats.UpgradeChecker
  • loci.formats.WriterWrapper (implements loci.formats.IFormatWriter)
    • loci.formats.gui.BufferedImageWriter

Interface Hierarchy

• loci.formats.cache.CacheListener
• loci.formats.cache.CacheReporter
  • loci.formats.cache.ICacheStrategy
• loci.formats.cache.ICacheSource
• loci.formats.out.IExtraMetadataWriter
• loci.formats.dicom.ITagProvider
• loci.formats.Memoizer.Deser
• loci.common.services.Service
  • loci.formats.services.EXIFService
  • loci.formats.services.JAIIIOService
  • loci.formats.services.JHDFService
  • loci.formats.services.JPEGTurboService
  • loci.formats.services.JPEGXRService

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
    • loci.formats.codec.CompressionType (implements loci.common.enumeration.CodedEnum)
    • loci.formats.dicom.DicomAttribute
    • loci.formats.dicom.DicomVR
    • loci.formats.tiff.IFDType (implements loci.common.enumeration.CodedEnum)
    • loci.formats.codec.JPEG2000BoxType (implements loci.common.enumeration.CodedEnum)
    • loci.formats.codec.JPEG2000SegmentMarker (implements loci.common.enumeration.CodedEnum)
    • loci.formats.tiff.PhotoInterp (implements loci.common.enumeration.CodedEnum)
    • loci.formats.dicom.ResolutionStrategy
    • loci.formats.tiff.TiffCompression (implements loci.common.enumeration.CodedEnum)