Package loci.formats.out

Class ICSWriter

java.lang.Object
loci.formats.FormatHandler
loci.formats.FormatWriter
loci.formats.out.ICSWriter
All Implemented Interfaces:
Closeable, AutoCloseable, loci.formats.ICompressedTileWriter, loci.formats.IFormatHandler, loci.formats.IFormatWriter, loci.formats.IMetadataConfigurable, loci.formats.IPyramidHandler
public class ICSWriter extends loci.formats.FormatWriter
ICSWriter is the file format writer for ICS files. It writes ICS version 1 and 2 files.

  • Field Summary

    Fields inherited from class loci.formats.FormatWriter

    cm, compression, compressionTypes, fps, initialized, interleaved, metadataRetrieve, options, out, resolution, resolutionData, sequential, series, validBits

    Fields inherited from class loci.formats.FormatHandler

    COMPRESSION_SUFFIXES, currentId, format, LOGGER, metadataOptions, suffixes

  • Constructor Summary

    Constructors
    Constructor
    Description
    ICSWriter()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    boolean
    canDoStacks()
     
    void
    close()
     
    int[]
    getPixelTypes(String codec)
     
    void
    saveBytes(int no, byte[] buf, int x, int y, int w, int h)
     
    void
    setId(String id)
     
    void
    setOutputOrder(String outputOrder)
    Set the order in which dimensions should be written to the file.

    Methods inherited from class loci.formats.FormatWriter

    changeOutputFile, checkParams, createOutputStream, getCodecOptions, getColorModel, getCompression, getCompressionTypes, getFramesPerSecond, getMetadataRetrieve, getPixelTypes, getPlaneCount, getPlaneCount, getResolution, getResolutionCount, getResolutions, getSamplesPerPixel, getSamplesPerPixel, getSeries, getSizeX, getSizeY, getTileSizeX, getTileSizeY, hasResolutions, isFullPlane, isInterleaved, isSupportedType, saveBytes, saveBytes, savePlane, savePlane, savePlane, seekToPlaneOffset, setCodecOptions, setColorModel, setCompression, setFramesPerSecond, setInterleaved, setMetadataRetrieve, setResolution, setResolutions, setSeries, setTileSizeX, setTileSizeY, setValidBitsPerPixel, setWriteSequentially

    Methods inherited from class loci.formats.FormatHandler

    checkSuffix, checkSuffix, getFormat, getMetadataOptions, getNativeDataType, getSuffixes, getSupportedMetadataLevels, isThisType, setMetadataOptions

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    Methods inherited from interface loci.formats.ICompressedTileWriter

    getCodec, saveCompressedBytes

    Methods inherited from interface loci.formats.IFormatHandler

    getFormat, getNativeDataType, getSuffixes, isThisType

    Methods inherited from interface loci.formats.IMetadataConfigurable

    getMetadataOptions, getSupportedMetadataLevels, setMetadataOptions