Package net.preibisch.mvrecon.process.interestpointregistration.global.pointmatchcreating

Interface PointMatchCreator

All Known Implementing Classes:

ImageCorrelationPointMatchCreator, InterestPointMatchCreator, MetaDataWeakLinkCreator, WeakLinkPointMatchCreator

public interface PointMatchCreator

Method Summary

Modifier and Type	Method	Description
<M extends mpicbg.models.Model<M>> void	assignPointMatches(HashMap<mpicbg.spim.data.sequence.ViewId,mpicbg.models.Tile<M>> tileMap, ArrayList<Group<mpicbg.spim.data.sequence.ViewId>> groups, Collection<mpicbg.spim.data.sequence.ViewId> fixedViews)	assign pointmatches for all views that this object knows and that are present in tileMap.keySet(), which comes from getAllViews() plus what is in the group definition of the globalopt called last
<M extends mpicbg.models.Model<M>> void	assignWeights(HashMap<mpicbg.spim.data.sequence.ViewId,mpicbg.models.Tile<M>> tileMap, ArrayList<Group<mpicbg.spim.data.sequence.ViewId>> groups, Collection<mpicbg.spim.data.sequence.ViewId> fixedViews)	By default all weights are 1, if wanted one can adjust them here, otherwise simply return.
HashSet<mpicbg.spim.data.sequence.ViewId>	getAllViews()

Method Details

getAllViews

HashSet<mpicbg.spim.data.sequence.ViewId> getAllViews()

Returns:

- all views that this class knows and that are part of the global opt, called first

assignWeights

<M extends mpicbg.models.Model<M>> void assignWeights(HashMap<mpicbg.spim.data.sequence.ViewId,mpicbg.models.Tile<M>> tileMap,
 ArrayList<Group<mpicbg.spim.data.sequence.ViewId>> groups,
 Collection<mpicbg.spim.data.sequence.ViewId> fixedViews)

By default all weights are 1, if wanted one can adjust them here, otherwise simply return. The idea is to modify the weights in the PointMatchGeneric objects, that are later on just added called second

Type Parameters:

M - model type

Parameters:

tileMap - - the map from viewId to Tile

groups - - which groups exist

fixedViews - - which views are fixed (one might need it?)

assignPointMatches

<M extends mpicbg.models.Model<M>> void assignPointMatches(HashMap<mpicbg.spim.data.sequence.ViewId,mpicbg.models.Tile<M>> tileMap,
 ArrayList<Group<mpicbg.spim.data.sequence.ViewId>> groups,
 Collection<mpicbg.spim.data.sequence.ViewId> fixedViews)

assign pointmatches for all views that this object knows and that are present in tileMap.keySet(), which comes from getAllViews() plus what is in the group definition of the globalopt called last

Type Parameters:

M - model type

Parameters:

tileMap - - the map from viewId to Tile

groups - - which groups exist (one might need it?)

fixedViews - - which views are fixed (one might need it?)