Package net.preibisch.mvrecon.process.fusion.transformed

Class AbstractTransformedImgRandomAccess<T extends net.imglib2.type.numeric.RealType<T>>

java.lang.Object

net.imglib2.AbstractEuclideanSpace

net.imglib2.AbstractLocalizableInt

net.preibisch.mvrecon.process.fusion.transformed.AbstractTransformedIntervalRandomAccess

net.preibisch.mvrecon.process.fusion.transformed.AbstractTransformedImgRandomAccess<T>

All Implemented Interfaces:

net.imglib2.EuclideanSpace, net.imglib2.Localizable, net.imglib2.Positionable, net.imglib2.RandomAccess<net.imglib2.type.numeric.real.FloatType>, net.imglib2.RealLocalizable, net.imglib2.Sampler<net.imglib2.type.numeric.real.FloatType>, net.imglib2.Typed<net.imglib2.type.numeric.real.FloatType>

Direct Known Subclasses:

InterpolatingNonRigidRandomAccess, NonRigidRandomAccess, TransformedInputRandomAccess

public abstract class AbstractTransformedImgRandomAccess<T extends net.imglib2.type.numeric.RealType<T>>
extends AbstractTransformedIntervalRandomAccess

Field Summary

Fields

Modifier and Type	Field	Description
protected final boolean	hasMinValue
protected final net.imglib2.RandomAccessibleInterval<T>	img
protected final net.imglib2.RealRandomAccess<net.imglib2.type.numeric.real.FloatType>	ir
protected final float	minValue

Fields inherited from class net.preibisch.mvrecon.process.fusion.transformed.AbstractTransformedIntervalRandomAccess

imgMaxX, imgMaxY, imgMaxZ, imgMinX, imgMinY, imgMinZ, interpolatorFactory, interval, offsetX, offsetY, offsetZ, outside, v

Fields inherited from class net.imglib2.AbstractLocalizableInt

position

Fields inherited from class net.imglib2.AbstractEuclideanSpace

n

Constructor Summary

Constructors

Constructor	Description
AbstractTransformedImgRandomAccess(net.imglib2.RandomAccessibleInterval<T> img, net.imglib2.interpolation.InterpolatorFactory<net.imglib2.type.numeric.real.FloatType,net.imglib2.RandomAccessible<net.imglib2.type.numeric.real.FloatType>> interpolatorFactory, boolean hasMinValue, float minValue, net.imglib2.type.numeric.real.FloatType outside, long[] offset)

Method Summary

Modifier and Type	Method	Description
protected static final net.imglib2.type.numeric.real.FloatType	getInsideValue(net.imglib2.type.numeric.real.FloatType v, net.imglib2.RealRandomAccess<net.imglib2.type.numeric.real.FloatType> ir, boolean hasMinValue, float minValue)

Methods inherited from class net.preibisch.mvrecon.process.fusion.transformed.AbstractTransformedIntervalRandomAccess

bck, fwd, intersectsLinearInterpolation, move, move, move, move, move, setPosition, setPosition, setPosition, setPosition, setPosition

Methods inherited from class net.imglib2.AbstractLocalizableInt

getDoublePosition, getFloatPosition, getIntPosition, getLongPosition, localize, localize, localize, localize

Methods inherited from class net.imglib2.AbstractEuclideanSpace

numDimensions

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.imglib2.EuclideanSpace

numDimensions

Methods inherited from interface net.imglib2.Localizable

getDoublePosition, getFloatPosition, getIntPosition, getLongPosition, localize, localize, localize, localize, positionAsLongArray, positionAsPoint

Methods inherited from interface net.imglib2.RandomAccess

copy, copyRandomAccess, setPositionAndGet, setPositionAndGet, setPositionAndGet

Methods inherited from interface net.imglib2.RealLocalizable

localize, localize, positionAsDoubleArray, positionAsRealPoint

Methods inherited from interface net.imglib2.Sampler

get, getType

Field Details

hasMinValue

protected final boolean hasMinValue

minValue

protected final float minValue

img

protected final net.imglib2.RandomAccessibleInterval<T extends net.imglib2.type.numeric.RealType<T>> img

ir

protected final net.imglib2.RealRandomAccess<net.imglib2.type.numeric.real.FloatType> ir

Constructor Details

AbstractTransformedImgRandomAccess

public AbstractTransformedImgRandomAccess(net.imglib2.RandomAccessibleInterval<T> img,
 net.imglib2.interpolation.InterpolatorFactory<net.imglib2.type.numeric.real.FloatType,net.imglib2.RandomAccessible<net.imglib2.type.numeric.real.FloatType>> interpolatorFactory,
 boolean hasMinValue,
 float minValue,
 net.imglib2.type.numeric.real.FloatType outside,
 long[] offset)

Method Details

getInsideValue

protected static final net.imglib2.type.numeric.real.FloatType getInsideValue(net.imglib2.type.numeric.real.FloatType v,
 net.imglib2.RealRandomAccess<net.imglib2.type.numeric.real.FloatType> ir,
 boolean hasMinValue,
 float minValue)