Package net.preibisch.mvrecon.process.fusion.blk

Class SplitImgLoaderThinPlateSplineFusion.LandmarkRecord

java.lang.Object

net.preibisch.mvrecon.process.fusion.blk.SplitImgLoaderThinPlateSplineFusion.LandmarkRecord

All Implemented Interfaces:

Serializable

Enclosing class:

SplitImgLoaderThinPlateSplineFusion

public static final class SplitImgLoaderThinPlateSplineFusion.LandmarkRecord
extends Object
implements Serializable

One TPS landmark, classified by category. Emitted to an optional visitor passed to SplitImgLoaderThinPlateSplineFusion.getCoefficients(net.preibisch.mvrecon.fiji.spimdata.imgloaders.splitting.SplitViewerImgLoader, java.util.Map<java.lang.Integer, java.util.List<java.lang.Integer>>, java.util.Map<mpicbg.spim.data.sequence.ViewId, mpicbg.spim.data.registration.ViewRegistration>, mpicbg.spim.data.sequence.ViewId, double, double), primarily for diagnostic / overlay tooling (export to CSV, draw on top of the fused image, etc.). Source coords are in underlying-view pixel space (matching how Landmarks.getSourcePoints() stores them). Target coords are in render/global space (anisotropy already applied). For TYPE_NAIL records, underlyingViewId is the recipient underlying view (whose TPS the landmark feeds) and donorViewId is the underlying view whose split sub-view's surface produced the corner; the two coincide for "self" donations and differ for cross-view tie nails. For TYPE_CORR_COM/ TYPE_MIDPOINT the donor field equals the underlying view.

See Also:

• Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
final mpicbg.spim.data.sequence.ViewId	donorViewId
final double[]	source
final double[]	target
final String	type
static final String	TYPE_CORR_COM
static final String	TYPE_MIDPOINT
static final String	TYPE_NAIL
final mpicbg.spim.data.sequence.ViewId	underlyingViewId

Constructor Summary

Constructors

Constructor	Description
LandmarkRecord(mpicbg.spim.data.sequence.ViewId underlyingViewId, String type, double[] source, double[] target)
LandmarkRecord(mpicbg.spim.data.sequence.ViewId underlyingViewId, mpicbg.spim.data.sequence.ViewId donorViewId, String type, double[] source, double[] target)

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

TYPE_CORR_COM

public static final String TYPE_CORR_COM

See Also:

• Constant Field Values

TYPE_MIDPOINT

public static final String TYPE_MIDPOINT

See Also:

• Constant Field Values

TYPE_NAIL

public static final String TYPE_NAIL

See Also:

• Constant Field Values

underlyingViewId

public final mpicbg.spim.data.sequence.ViewId underlyingViewId

donorViewId

public final mpicbg.spim.data.sequence.ViewId donorViewId

type

public final String type

source

public final double[] source

target

public final double[] target

Constructor Details

LandmarkRecord

public LandmarkRecord(mpicbg.spim.data.sequence.ViewId underlyingViewId,
 String type,
 double[] source,
 double[] target)

LandmarkRecord

public LandmarkRecord(mpicbg.spim.data.sequence.ViewId underlyingViewId,
 mpicbg.spim.data.sequence.ViewId donorViewId,
 String type,
 double[] source,
 double[] target)