Package net.preibisch.mvrecon.fiji.spimdata.imgloaders.flatfield

Class LazyLoadingFlatFieldCorrectionMap<IL extends mpicbg.spim.data.sequence.ImgLoader>

java.lang.Object

net.preibisch.mvrecon.fiji.spimdata.imgloaders.flatfield.LazyLoadingFlatFieldCorrectionMap<IL>

All Implemented Interfaces:

mpicbg.spim.data.generic.sequence.BasicImgLoader, mpicbg.spim.data.sequence.ImgLoader, FlatfieldCorrectionWrappedImgLoader<IL>

Direct Known Subclasses:

DefaultFlatfieldCorrectionWrappedImgLoader, MultiResolutionFlatfieldCorrectionWrappedImgLoader

public abstract class LazyLoadingFlatFieldCorrectionMap<IL extends mpicbg.spim.data.sequence.ImgLoader>
extends Object
implements FlatfieldCorrectionWrappedImgLoader<IL>

Field Summary

Fields

Modifier and Type	Field	Description
protected final Map<mpicbg.spim.data.sequence.ViewId,net.imglib2.util.Pair<File,File>>	fileMap
protected final Map<File,net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType>>	raiMap

Constructor Summary

Constructors

Constructor	Description
LazyLoadingFlatFieldCorrectionMap()

Method Summary

Modifier and Type	Method	Description
protected net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType>	getBrightImg(mpicbg.spim.data.sequence.ViewId vId)
protected net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType>	getDarkImg(mpicbg.spim.data.sequence.ViewId vId)
Map<mpicbg.spim.data.sequence.ViewId,net.imglib2.util.Pair<File,File>>	getFileMap()
protected void	loadFileIfNecessary(File file)
static void	main(String[] args)
void	setBrightImage(mpicbg.spim.data.sequence.ViewId vId, File imgFile)
void	setDarkImage(mpicbg.spim.data.sequence.ViewId vId, File imgFile)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.preibisch.mvrecon.fiji.spimdata.imgloaders.flatfield.FlatfieldCorrectionWrappedImgLoader

getWrappedImgLoder, isActive, isCached, setActive, setCached

Methods inherited from interface mpicbg.spim.data.sequence.ImgLoader

getSetupImgLoader

Field Details

raiMap

protected final Map<File,net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType>> raiMap

fileMap

protected final Map<mpicbg.spim.data.sequence.ViewId,net.imglib2.util.Pair<File,File>> fileMap

Constructor Details

LazyLoadingFlatFieldCorrectionMap

public LazyLoadingFlatFieldCorrectionMap()

Method Details

setBrightImage

public void setBrightImage(mpicbg.spim.data.sequence.ViewId vId,
 File imgFile)

Specified by:

setBrightImage in interface FlatfieldCorrectionWrappedImgLoader<IL extends mpicbg.spim.data.sequence.ImgLoader>

setDarkImage

public void setDarkImage(mpicbg.spim.data.sequence.ViewId vId,
 File imgFile)

Specified by:

setDarkImage in interface FlatfieldCorrectionWrappedImgLoader<IL extends mpicbg.spim.data.sequence.ImgLoader>

getBrightImg

protected net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType> getBrightImg(mpicbg.spim.data.sequence.ViewId vId)

getDarkImg

protected net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType> getDarkImg(mpicbg.spim.data.sequence.ViewId vId)

loadFileIfNecessary

protected void loadFileIfNecessary(File file)

main

public static void main(String[] args)

getFileMap

public Map<mpicbg.spim.data.sequence.ViewId,net.imglib2.util.Pair<File,File>> getFileMap()