Package net.preibisch.mvrecon.fiji.plugin.interestpointdetection

Class DifferenceOfGaussianGUI

java.lang.Object

net.preibisch.mvrecon.fiji.plugin.interestpointdetection.InterestPointDetectionGUI

net.preibisch.mvrecon.fiji.plugin.interestpointdetection.DifferenceOfGUI

net.preibisch.mvrecon.fiji.plugin.interestpointdetection.DifferenceOfGaussianGUI

All Implemented Interfaces:

GenericDialogAppender

public class DifferenceOfGaussianGUI
extends DifferenceOfGUI
implements GenericDialogAppender

Field Summary

Fields

Modifier and Type	Field	Description
static String[]	computationOnChoice
static int	defaultComputationChoiceIndex
static boolean	defaultFindMax
static boolean	defaultFindMin
static double	defaultSigma
static double	defaultThreshold
static double	defaultUseGPUMem

Fields inherited from class net.preibisch.mvrecon.fiji.plugin.interestpointdetection.DifferenceOfGUI

brightnessChoice, defaultAdditionalSigmaX, defaultAdditionalSigmaY, defaultAdditionalSigmaZ, defaultBrightness, defaultDownsampleXYIndex, defaultDownsampleZIndex, defaultFuseFrom, defaultFuseTo, defaultGroupChoice, defaultImageSigmaX, defaultImageSigmaY, defaultImageSigmaZ, defaultLocalization, defaultMaxDetections, defaultMaxDetectionsTypeIndex, defaultMaxIntensity, defaultMinIntensity, defaultSameMinMax, defaultUseMinMaxForAll, defaultViewChoice, downsampleChoiceXY, downsampleChoiceZ, downsampleXYIndex, downsampleZ, ds, fuseFrom, fuseTo, imageSigmaX, imageSigmaY, imageSigmaZ, limitDetections, localization, localizationChoice, maxDetections, maxDetectionsTypeIndex, maxIntensity, minIntensity, useAverageMapBack

Constructor Summary

Constructors

Constructor	Description
DifferenceOfGaussianGUI(SpimData2 spimData, List<mpicbg.spim.data.sequence.ViewId> viewIdsToProcess)

Method Summary

Modifier and Type	Method	Description
protected void	addAddtionalParameters(ij.gui.GenericDialog gd)
void	addQuery(ij.gui.GenericDialog gd)
HashMap<mpicbg.spim.data.sequence.ViewId,List<InterestPoint>>	findInterestPoints(mpicbg.spim.data.sequence.TimePoint t)
String	getDescription()
String	getParameters()
DifferenceOfGaussianGUI	newInstance(SpimData2 spimData, List<mpicbg.spim.data.sequence.ViewId> viewIdsToProcess)
boolean	parseDialog(ij.gui.GenericDialog gd)
protected boolean	queryAdditionalParameters(ij.gui.GenericDialog gd)
protected boolean	setAdvancedValues()
protected boolean	setDefaultValues(int brightness)
protected boolean	setInteractiveValues()

Methods inherited from class net.preibisch.mvrecon.fiji.plugin.interestpointdetection.DifferenceOfGUI

getGroupedImagePlusForInteractive, getGroups, getGroupSelection, getImagePlusForInteractive, getViewSelection, nameForGroup, preprocess, queryParameters

Methods inherited from class net.preibisch.mvrecon.fiji.plugin.interestpointdetection.InterestPointDetectionGUI

getViewIdsToProcess

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

defaultUseGPUMem

public static double defaultUseGPUMem

defaultSigma

public static double defaultSigma

defaultThreshold

public static double defaultThreshold

defaultFindMin

public static boolean defaultFindMin

defaultFindMax

public static boolean defaultFindMax

computationOnChoice

public static String[] computationOnChoice

defaultComputationChoiceIndex

public static int defaultComputationChoiceIndex

Constructor Details

DifferenceOfGaussianGUI

public DifferenceOfGaussianGUI(SpimData2 spimData,
 List<mpicbg.spim.data.sequence.ViewId> viewIdsToProcess)

Method Details

getDescription

public String getDescription()

Specified by:

getDescription in class InterestPointDetectionGUI

newInstance

public DifferenceOfGaussianGUI newInstance(SpimData2 spimData,
 List<mpicbg.spim.data.sequence.ViewId> viewIdsToProcess)

Specified by:

newInstance in class InterestPointDetectionGUI

findInterestPoints

public HashMap<mpicbg.spim.data.sequence.ViewId,List<InterestPoint>> findInterestPoints(mpicbg.spim.data.sequence.TimePoint t)

Specified by:

findInterestPoints in class InterestPointDetectionGUI

setDefaultValues

protected boolean setDefaultValues(int brightness)

Specified by:

setDefaultValues in class DifferenceOfGUI

setAdvancedValues

protected boolean setAdvancedValues()

Specified by:

setAdvancedValues in class DifferenceOfGUI

setInteractiveValues

protected boolean setInteractiveValues()

Specified by:

setInteractiveValues in class DifferenceOfGUI

getParameters

public String getParameters()

Specified by:

getParameters in class InterestPointDetectionGUI

addAddtionalParameters

protected void addAddtionalParameters(ij.gui.GenericDialog gd)

Specified by:

addAddtionalParameters in class DifferenceOfGUI

queryAdditionalParameters

protected boolean queryAdditionalParameters(ij.gui.GenericDialog gd)

Specified by:

queryAdditionalParameters in class DifferenceOfGUI

addQuery

public void addQuery(ij.gui.GenericDialog gd)

Specified by:

addQuery in interface GenericDialogAppender

parseDialog

public boolean parseDialog(ij.gui.GenericDialog gd)

Specified by:

parseDialog in interface GenericDialogAppender