net.imglib2.labeling

Class NativeImgLabeling<T extends Comparable<T>,I extends IntegerType<I>>

java.lang.Object

net.imglib2.AbstractEuclideanSpace

net.imglib2.AbstractInterval

net.imglib2.labeling.AbstractLabeling<T>

net.imglib2.labeling.AbstractNativeLabeling<T>

net.imglib2.labeling.NativeImgLabeling<T,I>

Type Parameters:

T - the type of labels assigned to pixels

All Implemented Interfaces:

Iterable<LabelingType<T>>, Dimensions, EuclideanSpace, Interval, IterableInterval<LabelingType<T>>, IterableRealInterval<LabelingType<T>>, Labeling<T>, NativeLabeling<T>, RandomAccessible<LabelingType<T>>, RandomAccessibleInterval<LabelingType<T>>, RealInterval, SubIntervalIterable<LabelingType<T>>

Deprecated.

@Deprecated
public class NativeImgLabeling<T extends Comparable<T>,I extends IntegerType<I>>
extends AbstractNativeLabeling<T>
implements SubIntervalIterable<LabelingType<T>>

A labeling backed by a native image that takes a labeling type backed by an int array.

Author:

Lee Kamentsky, Christian Dietz, Martin Horn

Field Summary

Fields

Modifier and Type	Field and Description
protected long[]	generation Deprecated.
protected Img<I>	img Deprecated.

Fields inherited from class net.imglib2.labeling.AbstractNativeLabeling

mapping

Fields inherited from class net.imglib2.labeling.AbstractLabeling

size, strategy

Fields inherited from class net.imglib2.AbstractInterval

max, min

Fields inherited from class net.imglib2.AbstractEuclideanSpace

n

Constructor Summary

Constructors

Constructor and Description
NativeImgLabeling(Img<I> img) Deprecated.
NativeImgLabeling(LabelingROIStrategyFactory<T> strategyFactory, Img<I> img) Deprecated. Create a labeling backed by a native image with custom strategy and image factory

Method Summary

Modifier and Type	Method and Description
Labeling<T>	copy() Deprecated. Copy method
Cursor<LabelingType<T>>	cursor() Deprecated.
Cursor<LabelingType<T>>	cursor(Interval interval) Deprecated.
<LL extends Comparable<LL>> LabelingFactory<LL>	factory() Deprecated. Factory
LabelingType<T>	firstElement() Deprecated.
Img<I>	getStorageImg() Deprecated.
Object	iterationOrder() Deprecated.
Iterator<LabelingType<T>>	iterator() Deprecated.
Cursor<LabelingType<T>>	localizingCursor() Deprecated.
Cursor<LabelingType<T>>	localizingCursor(Interval interval) Deprecated.
RandomAccess<LabelingType<T>>	randomAccess() Deprecated.
RandomAccess<LabelingType<T>>	randomAccess(Interval interval) Deprecated.
Object	subIntervalIterationOrder(Interval interval) Deprecated.
boolean	supportsOptimizedCursor(Interval interval) Deprecated.

Methods inherited from class net.imglib2.labeling.AbstractNativeLabeling

getMapping

Methods inherited from class net.imglib2.labeling.AbstractLabeling

getArea, getExtents, getIterableRegionOfInterest, getLabels, getRasterStart, getRegionOfInterest, setLabelingCursorStrategy, size

Methods inherited from class net.imglib2.AbstractInterval

dimension, dimensions, max, max, max, min, min, min, realMax, realMax, realMax, realMin, realMin, realMin

Methods inherited from class net.imglib2.AbstractEuclideanSpace

numDimensions

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.imglib2.labeling.Labeling

getArea, getExtents, getIterableRegionOfInterest, getLabels, getRasterStart, getRegionOfInterest

Methods inherited from interface net.imglib2.IterableRealInterval

size

Methods inherited from interface java.lang.Iterable

forEach, spliterator

Methods inherited from interface net.imglib2.Interval

max, max, max, min, min, min

Methods inherited from interface net.imglib2.RealInterval

realMax, realMax, realMax, realMin, realMin, realMin

Methods inherited from interface net.imglib2.Dimensions

dimension, dimensions

Methods inherited from interface net.imglib2.EuclideanSpace

numDimensions

Field Detail

generation

protected final long[] generation

Deprecated.

img

protected final Img<I extends IntegerType<I>> img

Deprecated.

Constructor Detail

NativeImgLabeling

public NativeImgLabeling(Img<I> img)

Deprecated.

NativeImgLabeling

public NativeImgLabeling(LabelingROIStrategyFactory<T> strategyFactory,
                         Img<I> img)

Deprecated.

Create a labeling backed by a native image with custom strategy and image factory

Parameters:

strategyFactory - - the strategy factory that drives iteration and statistics

img -

Method Detail

randomAccess

public RandomAccess<LabelingType<T>> randomAccess()

Deprecated.

Specified by:

randomAccess in interface RandomAccessible<LabelingType<T extends Comparable<T>>>

cursor

public Cursor<LabelingType<T>> cursor()

Deprecated.

Specified by:

cursor in interface IterableInterval<LabelingType<T extends Comparable<T>>>

Specified by:

cursor in interface IterableRealInterval<LabelingType<T extends Comparable<T>>>

localizingCursor

public Cursor<LabelingType<T>> localizingCursor()

Deprecated.

Specified by:

localizingCursor in interface IterableInterval<LabelingType<T extends Comparable<T>>>

Specified by:

localizingCursor in interface IterableRealInterval<LabelingType<T extends Comparable<T>>>

getStorageImg

public Img<I> getStorageImg()

Deprecated.

copy

public Labeling<T> copy()

Deprecated.

Description copied from interface: Labeling

Copy method

Specified by:

copy in interface Labeling<T extends Comparable<T>>

Returns:

copy of the labeling

firstElement

public LabelingType<T> firstElement()

Deprecated.

Specified by:

firstElement in interface IterableRealInterval<LabelingType<T extends Comparable<T>>>

iterator

public Iterator<LabelingType<T>> iterator()

Deprecated.

Specified by:

iterator in interface Iterable<LabelingType<T extends Comparable<T>>>

randomAccess

public RandomAccess<LabelingType<T>> randomAccess(Interval interval)

Deprecated.

Specified by:

randomAccess in interface RandomAccessible<LabelingType<T extends Comparable<T>>>

iterationOrder

public Object iterationOrder()

Deprecated.

Specified by:

iterationOrder in interface IterableRealInterval<LabelingType<T extends Comparable<T>>>

factory

public <LL extends Comparable<LL>> LabelingFactory<LL> factory()

Deprecated.

Description copied from interface: Labeling

Factory

Specified by:

factory in interface Labeling<T extends Comparable<T>>

Returns:

create new labeling

supportsOptimizedCursor

public boolean supportsOptimizedCursor(Interval interval)

Deprecated.

Specified by:

supportsOptimizedCursor in interface SubIntervalIterable<LabelingType<T extends Comparable<T>>>

subIntervalIterationOrder

public Object subIntervalIterationOrder(Interval interval)

Deprecated.

Specified by:

subIntervalIterationOrder in interface SubIntervalIterable<LabelingType<T extends Comparable<T>>>

cursor

public Cursor<LabelingType<T>> cursor(Interval interval)

Deprecated.

Specified by:

cursor in interface SubIntervalIterable<LabelingType<T extends Comparable<T>>>

localizingCursor

public Cursor<LabelingType<T>> localizingCursor(Interval interval)

Deprecated.

Specified by:

localizingCursor in interface SubIntervalIterable<LabelingType<T extends Comparable<T>>>