net.imglib2.realtransform

Class AffineRandomAccessible<T,R extends AffineGet>

java.lang.Object

net.imglib2.realtransform.RealTransformRealRandomAccessible<T,R>

net.imglib2.realtransform.RealTransformRandomAccessible<T,R>

net.imglib2.realtransform.AffineRandomAccessible<T,R>

All Implemented Interfaces:

net.imglib2.EuclideanSpace, net.imglib2.RandomAccessible<T>, net.imglib2.RealRandomAccessible<T>, net.imglib2.Typed<T>

public class AffineRandomAccessible<T,R extends AffineGet>
extends RealTransformRandomAccessible<T,R>

A RandomAccessible whose samples are generated by rasterizing a RealRandomAccessible transformed by an affine transformation. Changing the affine transformation will affect the AffineRandomAccessible but not any existing RandomAccess on it because each RandomAccess internally works with a copy of the transform. Make sure that you request a new RandomAccess after modifying the transformation.

Author:

Stephan Saalfeld, Tobias Pietzsch

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
class	AffineRandomAccessible.AffineRandomAccess RealRandomAccess that generates its samples from a source RealRandomAccessible at coordinates transformed by a RealTransform.

Nested classes/interfaces inherited from class net.imglib2.realtransform.RealTransformRandomAccessible

RealTransformRandomAccessible.RealTransformRandomAccess

Nested classes/interfaces inherited from class net.imglib2.realtransform.RealTransformRealRandomAccessible

RealTransformRealRandomAccessible.RealTransformRealRandomAccess

Field Summary

Fields inherited from class net.imglib2.realtransform.RealTransformRealRandomAccessible

source, transformToSource

Constructor Summary

Constructors

Constructor and Description
AffineRandomAccessible(net.imglib2.RealRandomAccessible<T> source, R transformToSource)

Method Summary

Modifier and Type	Method and Description
AffineRandomAccessible.AffineRandomAccess	randomAccess()
AffineRandomAccessible.AffineRandomAccess	randomAccess(net.imglib2.Interval interval) To be overridden for RealTransform that can estimate the boundaries of a transferred RealInterval.

Methods inherited from class net.imglib2.realtransform.RealTransformRandomAccessible

getType

Methods inherited from class net.imglib2.realtransform.RealTransformRealRandomAccessible

getSource, getTransformToSource, numDimensions, realRandomAccess, realRandomAccess

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.imglib2.RandomAccessible

getAt, getAt, getAt, view

Methods inherited from interface net.imglib2.EuclideanSpace

numDimensions

Methods inherited from interface net.imglib2.RealRandomAccessible

getAt, getAt, getAt, realView

Constructor Detail

AffineRandomAccessible

public AffineRandomAccessible(net.imglib2.RealRandomAccessible<T> source,
                              R transformToSource)

Method Detail

randomAccess

public AffineRandomAccessible.AffineRandomAccess randomAccess()

Specified by:

randomAccess in interface net.imglib2.RandomAccessible<T>

Overrides:

randomAccess in class RealTransformRandomAccessible<T,R extends AffineGet>

randomAccess

public AffineRandomAccessible.AffineRandomAccess randomAccess(net.imglib2.Interval interval)

To be overridden for RealTransform that can estimate the boundaries of a transferred RealInterval.

Specified by:

randomAccess in interface net.imglib2.RandomAccessible<T>

Overrides:

randomAccess in class RealTransformRandomAccessible<T,R extends AffineGet>