Index (ImgLib2 Mesh 1.1.0 API)

A B C D E F G H I J L M N O P Q R S T U V W X Y Z
All Classes All Packages

A

add(double, double, double) - Method in interface net.imglib2.mesh.Vertices: Adds a vertex.
add(double, double, double, double, double, double, double, double) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
add(double, double, double, double, double, double, double, double) - Method in interface net.imglib2.mesh.Vertices: Adds a vertex.
add(double, double, double, double, double, double, double, double, double) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list.
add(double, double, double, double, double, double, double, double, double, double, double, double) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list.
add(int, int, int, double, double, double) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list, using int indices.
add(long, long, long) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list.
add(long, long, long, double, double, double) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
add(long, long, long, double, double, double) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list.
add(Contour) - Method in class net.imglib2.mesh.alg.zslicer.Slice
addAll(Collection<? extends Contour>) - Method in class net.imglib2.mesh.alg.zslicer.Slice
addf(float, float, float) - Method in interface net.imglib2.mesh.Vertices: Adds a vertex.
addf(float, float, float, float, float, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
addf(float, float, float, float, float, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
addf(float, float, float, float, float, float, float, float) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
addf(float, float, float, float, float, float, float, float) - Method in interface net.imglib2.mesh.Vertices: Adds a vertex.
addf(float, float, float, float, float, float, float, float, float) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list.
addf(float, float, float, float, float, float, float, float, float, float, float, float) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list.
addf(int, int, int) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list, using ints.
addf(int, int, int, float, float, float) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list, using ints.
addf(long, long, long) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list.
addf(long, long, long, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
addf(long, long, long, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
addf(long, long, long, float, float, float) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
addf(long, long, long, float, float, float) - Method in interface net.imglib2.mesh.Triangles: Adds a triangle to the mesh's triangles list.
addFaceInFront(TriangularFacet) - Method in class net.imglib2.mesh.alg.hull.Vertex
addfi(float, float, float) - Method in interface net.imglib2.mesh.Vertices: Adds a vertex, restricting the number of vertices to be an int.
addfi(float, float, float, float, float, float, float, float) - Method in interface net.imglib2.mesh.Vertices: Adds a vertex, restrictig the number of vertices to be an int.
addi(double, double, double) - Method in interface net.imglib2.mesh.Vertices: Adds a vertex, restricting the size of the vertices collection to int.
addi(double, double, double, double, double, double, double, double) - Method in interface net.imglib2.mesh.Vertices: Adds a vertex, restricting the size of the vertices collection to int.
area() - Method in class net.imglib2.mesh.alg.zslicer.Contour

B

binarySearch(int[], double[], int, int, double) - Static method in class net.imglib2.mesh.util.SortBy
boundingBox(Mesh) - Static method in class net.imglib2.mesh.Meshes: Computes and returns an oriented bounding box RealInterval
boundingBoxMesh(Mesh) - Static method in class net.imglib2.mesh.Meshes: Computes and returns an oriented bounding box Mesh
BufferMesh - Class in net.imglib2.mesh.impl.nio: Mesh implemented using Buffer objects.
BufferMesh(int, int) - Constructor for class net.imglib2.mesh.impl.nio.BufferMesh
BufferMesh(int, int, boolean) - Constructor for class net.imglib2.mesh.impl.nio.BufferMesh
BufferMesh(int, int, Function<Integer, ByteBuffer>) - Constructor for class net.imglib2.mesh.impl.nio.BufferMesh
BufferMesh(FloatBuffer, FloatBuffer, FloatBuffer, IntBuffer, FloatBuffer) - Constructor for class net.imglib2.mesh.impl.nio.BufferMesh
BufferMesh.Triangles - Class in net.imglib2.mesh.impl.nio
BufferMesh.Vertices - Class in net.imglib2.mesh.impl.nio

C

calculate(Mesh) - Static method in class net.imglib2.mesh.alg.hull.ConvexHull: Computes the convex hull of a Mesh
calculate(Mesh) - Static method in class net.imglib2.mesh.alg.InertiaTensor: Computes the inertia tensor.
calculate(Mesh, int) - Static method in class net.imglib2.mesh.alg.RemoveDuplicateVertices
calculate(RandomAccessibleInterval<T>) - Static method in class net.imglib2.mesh.alg.MarchingCubesBooleanType: Generates a Mesh surface from a RandomAccessibleInterval, containing all points with data value true
calculate(RandomAccessibleInterval<T>, double) - Static method in class net.imglib2.mesh.alg.MarchingCubesRealType: Generates a Mesh surface from a RandomAccessibleInterval, containing all points with data value isolevel
calculateEpsilon(Mesh) - Static method in class net.imglib2.mesh.alg.hull.ConvexHull: Computes the tolerance (epsilon) of the Mesh.
calculateNormals(Mesh, Mesh) - Static method in class net.imglib2.mesh.Meshes: Calculates the normals for a mesh.
center - Variable in class net.imglib2.mesh.alg.EllipsoidFitter.Ellipsoid: The ellipsoid center.
center(Mesh) - Static method in class net.imglib2.mesh.Meshes: Finds the center of a mesh using vertices.
centerX() - Method in class net.imglib2.mesh.alg.zslicer.Contour
centerY() - Method in class net.imglib2.mesh.alg.zslicer.Contour
centroid(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Returns the centroid of the mesh, that is the center of gravity of its volume.
cleanFaceInFront() - Method in class net.imglib2.mesh.alg.hull.Vertex
clear() - Method in class net.imglib2.mesh.alg.zslicer.Slice
clearFacesInFront() - Method in class net.imglib2.mesh.alg.hull.Vertex
compactness(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Returns the compactness of the mesh.
complexMerge(TriangularFacet) - Method in class net.imglib2.mesh.alg.hull.Horizon: Merges another facet to this facet.
compute(RandomAccessibleInterval<T>, double, Mesh) - Static method in class net.imglib2.mesh.alg.MarchingCubesRealType
compute(RandomAccessibleInterval<T>, Mesh) - Static method in class net.imglib2.mesh.alg.MarchingCubesBooleanType
connectedComponents(Mesh) - Static method in class net.imglib2.mesh.Meshes: Returns an iterable over the connected components of the specified mesh.
contains(Object) - Method in class net.imglib2.mesh.alg.zslicer.Slice
containsAll(Collection<?>) - Method in class net.imglib2.mesh.alg.zslicer.Slice
Contour - Class in net.imglib2.mesh.alg.zslicer
Contour(boolean) - Constructor for class net.imglib2.mesh.alg.zslicer.Contour
Contour(TDoubleArrayList, TDoubleArrayList, TDoubleArrayList, TDoubleArrayList, boolean) - Constructor for class net.imglib2.mesh.alg.zslicer.Contour
ConvexHull - Class in net.imglib2.mesh.alg.hull: This quickhull implementation is based on the paper "The Quickhull Algorithm for Convex Hulls" by Barber, Dobkin and Huhdanpaa (http://dpd.cs.princeton.edu/Papers/BarberDobkinHuhdanpaa.pdf).
ConvexHull() - Constructor for class net.imglib2.mesh.alg.hull.ConvexHull
convexHullSurfaceArea(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Computes the surface area of the convex hull of the specified mesh.
convexHullVerticesCount(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Describes the number of vertices on the surface of the convex hull of Mesh.
convexHullVolume(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Computes the volume of the convex hull of the specified mesh.
convexity(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Returns the convexity of a mesh.
convexity(Mesh, Mesh) - Static method in class net.imglib2.mesh.MeshStats: Returns the convexity of a mesh.
copy() - Method in class net.imglib2.mesh.alg.MeshCursor
copy(Mesh, Mesh) - Static method in class net.imglib2.mesh.Meshes: Copies a mesh into another mesh.
copyCursor() - Method in class net.imglib2.mesh.alg.MeshCursor
core() - Static method in class net.imglib2.mesh.util.Icosahedron
COTANGENT - net.imglib2.mesh.alg.TaubinSmoothing.TaubinWeightType: Use cotangent of the 2 triangles around an edge when adding the contribution of one edge.
COUNT_BYTES - Static variable in class net.imglib2.mesh.io.stl.STLMeshIO
cross(double, double, double, double, double, double, double[]) - Static method in class net.imglib2.mesh.util.MeshUtil: Cross product between vectors V1 and V2.
cursor() - Method in class net.imglib2.mesh.alg.MeshIterable

D

distanceToPlane(Vector3D) - Method in class net.imglib2.mesh.alg.hull.TriangularFacet: Computes the distance from a point to this facet
dotProduct(double, double, double, double, double, double) - Static method in class net.imglib2.mesh.util.MeshUtil: Dot product between vectors V1 and V2.

E

edgeID(int, int) - Static method in class net.imglib2.mesh.util.MeshUtil: Builds a unique id for an edge between the two specified vertices.
edgeStr(long) - Static method in class net.imglib2.mesh.util.MeshUtil
edgeV1(long) - Static method in class net.imglib2.mesh.util.MeshUtil: Returns the id of the first vertex of the specified edge.
edgeV2(long) - Static method in class net.imglib2.mesh.util.MeshUtil: Returns the id of the second vertex of the specified edge.
EllipsoidFitter - Class in net.imglib2.mesh.alg: Fit an ellipsoid to the convex-Hull of a 3D mesh.
EllipsoidFitter() - Constructor for class net.imglib2.mesh.alg.EllipsoidFitter
EllipsoidFitter.Ellipsoid - Class in net.imglib2.mesh.alg: The results of fitting an ellipsoid to a mesh or a collection of points.
elongation(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Describes the elogation of a Mesh.
equals(Object) - Method in class net.imglib2.mesh.alg.hull.TriangularFacet
ev1 - Variable in class net.imglib2.mesh.alg.EllipsoidFitter.Ellipsoid: The eigenvector of the smallest axis of the ellipsoid.
ev2 - Variable in class net.imglib2.mesh.alg.EllipsoidFitter.Ellipsoid: The eigenvector of the middle axis of the ellipsoid.
ev3 - Variable in class net.imglib2.mesh.alg.EllipsoidFitter.Ellipsoid: The eigenvector of the largest axis of the ellipsoid.

F

FACET_BYTES - Static variable in class net.imglib2.mesh.io.stl.STLMeshIO
FACET_START - Static variable in class net.imglib2.mesh.io.stl.STLMeshIO
firstElement() - Method in class net.imglib2.mesh.alg.MeshIterable
fit(Iterable<? extends RealLocalizable>, int) - Static method in class net.imglib2.mesh.alg.EllipsoidFitter: Fit an ellipsoid to a collection of 3D points.
fit(Mesh) - Static method in class net.imglib2.mesh.alg.EllipsoidFitter: Fit an ellipsoid to the convex-Hull of a 3D mesh.
fitOnConvexHull(Mesh) - Static method in class net.imglib2.mesh.alg.EllipsoidFitter: Fit an ellipsoid to a 3D mesh, assuming it is the convex-Hull.
fwd() - Method in class net.imglib2.mesh.alg.MeshCursor

G

get() - Method in class net.imglib2.mesh.alg.MeshCursor
getArea() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet: Get the area of this facet.
getCentroid() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet: Get the centroid of this facet.
getDistanceToFaceInFront() - Method in class net.imglib2.mesh.alg.hull.Vertex
getDoublePosition(int) - Method in class net.imglib2.mesh.alg.hull.Vertex
getDoublePosition(int) - Method in interface net.imglib2.mesh.Vertex
getFacesInFront() - Method in class net.imglib2.mesh.alg.hull.Vertex
getFloatPosition(int) - Method in class net.imglib2.mesh.alg.hull.Vertex
getFloatPosition(int) - Method in interface net.imglib2.mesh.Vertex
getLongPosition(int) - Method in class net.imglib2.mesh.alg.MeshCursor
getMaximumDistanceVertex() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet: The vertex which is in front and farthest apart of the plane
getNormal() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet: Get the normal of this facet.
getNVerticesFaces(String) - Static method in class net.imglib2.mesh.io.ply.PLYMeshIO: Returns the number of vertices and faces declared in this file.
getP0() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet
getP1() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet
getP2() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet
getPlaneOffset() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet: Computes the offset of this facet
getPointsInFront() - Method in class net.imglib2.mesh.alg.hull.Vertex
getVerticesInFront() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet: All points which are in front of this plane.

H

hashCode() - Method in class net.imglib2.mesh.alg.hull.TriangularFacet
hasNext() - Method in class net.imglib2.mesh.alg.MeshCursor
HEADER - Static variable in class net.imglib2.mesh.io.stl.STLMeshIO
HEADER_BYTES - Static variable in class net.imglib2.mesh.io.stl.STLMeshIO
Horizon - Class in net.imglib2.mesh.alg.hull: A Horizon is the result of n neighboring TriangularFacet which are merged.
Horizon(TriangularFacet) - Constructor for class net.imglib2.mesh.alg.hull.Horizon: Create a new Horizon from a TriangularFacet

I

Icosahedron - Class in net.imglib2.mesh.util: Icosahedron spheres.
index() - Method in interface net.imglib2.mesh.Triangle: Index into the mesh's list of triangles.
index() - Method in interface net.imglib2.mesh.Vertex: Index into the mesh's list of vertices.
indices() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
InertiaTensor - Class in net.imglib2.mesh.alg: Inertia tensor of a 3D mesh.
InertiaTensor() - Constructor for class net.imglib2.mesh.alg.InertiaTensor
Interior - Class in net.imglib2.mesh.alg
Interior(Mesh, double) - Constructor for class net.imglib2.mesh.alg.Interior
Interior(Mesh, RealInterval, double) - Constructor for class net.imglib2.mesh.alg.Interior
isEmpty() - Method in class net.imglib2.mesh.alg.zslicer.Slice
isInside(RealPoint) - Method in class net.imglib2.mesh.alg.Interior
isInterior() - Method in class net.imglib2.mesh.alg.zslicer.Contour
iterable(Mesh) - Static method in class net.imglib2.mesh.alg.MeshConnectedComponents
iterationOrder() - Method in class net.imglib2.mesh.alg.MeshIterable
iterator() - Method in class net.imglib2.mesh.alg.MeshIterable
iterator() - Method in class net.imglib2.mesh.alg.zslicer.Slice
iterator() - Method in interface net.imglib2.mesh.Triangles
iterator() - Method in interface net.imglib2.mesh.Vertices
iterator(Mesh) - Static method in class net.imglib2.mesh.alg.MeshConnectedComponents

J

jumpFwd(long) - Method in class net.imglib2.mesh.alg.MeshCursor

L

lastEpsilon() - Static method in class net.imglib2.mesh.alg.hull.ConvexHull: Returns the epsilon value of the last computed convex hull.
localize(double[]) - Method in class net.imglib2.mesh.alg.hull.Vertex
localize(double[]) - Method in interface net.imglib2.mesh.Vertex
localize(float[]) - Method in class net.imglib2.mesh.alg.hull.Vertex
localize(float[]) - Method in interface net.imglib2.mesh.Vertex
localizingCursor() - Method in class net.imglib2.mesh.alg.MeshIterable

M

main(String[]) - Static method in class net.imglib2.mesh.util.SortArray
main(String[]) - Static method in class net.imglib2.mesh.util.SortBy
main(String[]) - Static method in class net.imglib2.mesh.util.SortTrove
mainElongation(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Describes the elongation of the two larger principle axes of the minimum box containing a Mesh.
marchingCubes(RandomAccessibleInterval<T>) - Static method in class net.imglib2.mesh.Meshes: Creates mesh e.g.
marchingCubes(RandomAccessibleInterval<T>, double) - Static method in class net.imglib2.mesh.Meshes: Creates mesh e.g.
MarchingCubesBooleanType - Class in net.imglib2.mesh.alg: This is a marching cubes implementation.
MarchingCubesBooleanType() - Constructor for class net.imglib2.mesh.alg.MarchingCubesBooleanType
MarchingCubesRealType - Class in net.imglib2.mesh.alg: This is a marching cubes implementation.
MarchingCubesRealType() - Constructor for class net.imglib2.mesh.alg.MarchingCubesRealType
max(int) - Method in class net.imglib2.mesh.alg.MeshIterable
maxZ(Vertices, long, long, long, double) - Static method in class net.imglib2.mesh.util.MeshUtil: Return the maximal Z value of a given triangle, rounded to twice the specified scale.
medianElongation(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Describes the elongation of the two smaller principle axes of the minimum box containing a Mesh.
merge(Iterable<Mesh>) - Static method in class net.imglib2.mesh.Meshes
mesh() - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
mesh() - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
mesh() - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
mesh() - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
mesh() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
mesh() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
mesh() - Method in interface net.imglib2.mesh.Triangle: The mesh to which the triangle belongs.
mesh() - Method in interface net.imglib2.mesh.Triangles: The mesh to which the collection of triangles belongs.
mesh() - Method in interface net.imglib2.mesh.Vertex: The mesh to which the vertex belongs.
mesh() - Method in interface net.imglib2.mesh.Vertices: The mesh to which the collection of vertices belongs.
Mesh - Interface in net.imglib2.mesh: 3D mesh data structure consisting of triangles and their vertices.
MeshConnectedComponents - Class in net.imglib2.mesh.alg: Connected components algorithm for meshes.
MeshConnectedComponents() - Constructor for class net.imglib2.mesh.alg.MeshConnectedComponents
MeshCursor<T> - Class in net.imglib2.mesh.alg
MeshCursor(RandomAccess<T>, Mesh, double[]) - Constructor for class net.imglib2.mesh.alg.MeshCursor
MeshCursor(RandomAccess<T>, Mesh, double[], RealInterval) - Constructor for class net.imglib2.mesh.alg.MeshCursor
Meshes - Class in net.imglib2.mesh: Utility methods for working with Mesh objects.
MeshIterable<T> - Class in net.imglib2.mesh.alg
MeshIterable(RandomAccessible<T>, Mesh, double[]) - Constructor for class net.imglib2.mesh.alg.MeshIterable: Creates an iterable for the pixels of the specified image inside the specified mesh.
MeshIterable(RandomAccessible<T>, Mesh, double[], RealInterval) - Constructor for class net.imglib2.mesh.alg.MeshIterable: Creates an iterable for the pixels of the specified image inside the specified mesh.
MeshStats - Class in net.imglib2.mesh: Static utilities that compute various shape descriptors of a mesh.
MeshUtil - Class in net.imglib2.mesh.util
MeshUtil() - Constructor for class net.imglib2.mesh.util.MeshUtil
min(int) - Method in class net.imglib2.mesh.alg.MeshIterable
minZ(Vertices, long, long, long, double) - Static method in class net.imglib2.mesh.util.MeshUtil: Return the minimal Z value of a given triangle, rounded to twice the specified scale.
MollerTrumbore - Class in net.imglib2.mesh.alg: Möller–Trumbore intersection algorithm.
MollerTrumbore(Mesh) - Constructor for class net.imglib2.mesh.alg.MollerTrumbore
mround(double, double, int, int) - Static method in class net.imglib2.mesh.util.MeshUtil: Rounds a position to a multiple of small number, plus reminder.

N

n(Mesh) - Static method in class net.imglib2.mesh.alg.MeshConnectedComponents: Returns the number of connected components in this mesh.
NAIVE - net.imglib2.mesh.alg.TaubinSmoothing.TaubinWeightType: Use identical weight for all edges.
NaiveDoubleMesh - Class in net.imglib2.mesh.impl.naive
NaiveDoubleMesh() - Constructor for class net.imglib2.mesh.impl.naive.NaiveDoubleMesh
NaiveDoubleMesh.Triangles - Class in net.imglib2.mesh.impl.naive
NaiveDoubleMesh.Vertices - Class in net.imglib2.mesh.impl.naive
NaiveFloatMesh - Class in net.imglib2.mesh.impl.naive
NaiveFloatMesh() - Constructor for class net.imglib2.mesh.impl.naive.NaiveFloatMesh
NaiveFloatMesh.Triangles - Class in net.imglib2.mesh.impl.naive
NaiveFloatMesh.Vertices - Class in net.imglib2.mesh.impl.naive
nConnectedComponents(Mesh) - Static method in class net.imglib2.mesh.Meshes: Returns the number of connected components in the specified mesh.
net.imglib2.mesh - package net.imglib2.mesh
net.imglib2.mesh.alg - package net.imglib2.mesh.alg
net.imglib2.mesh.alg.hull - package net.imglib2.mesh.alg.hull
net.imglib2.mesh.alg.zslicer - package net.imglib2.mesh.alg.zslicer
net.imglib2.mesh.impl - package net.imglib2.mesh.impl: Base package for mesh data structure.
net.imglib2.mesh.impl.naive - package net.imglib2.mesh.impl.naive: Implementations of Mesh that are based on arrays of floats and doubles using gnu.trove.list.array.
net.imglib2.mesh.impl.nio - package net.imglib2.mesh.impl.nio: Mesh implemented using Buffer objects.
net.imglib2.mesh.io.ply - package net.imglib2.mesh.io.ply
net.imglib2.mesh.io.stl - package net.imglib2.mesh.io.stl
net.imglib2.mesh.io.xyz - package net.imglib2.mesh.io.xyz
net.imglib2.mesh.util - package net.imglib2.mesh.util: General utils to manipulate and interrogate meshes.
net.imglib2.mesh.view - package net.imglib2.mesh.view
next() - Method in class net.imglib2.mesh.alg.MeshCursor
normals() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
normals() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
numDimensions() - Method in class net.imglib2.mesh.alg.hull.Vertex
numDimensions() - Method in class net.imglib2.mesh.alg.MeshCursor
numDimensions() - Method in class net.imglib2.mesh.alg.MeshIterable
numDimensions() - Method in interface net.imglib2.mesh.Vertex
nx() - Method in interface net.imglib2.mesh.Triangle: X coordinate of triangle's normal, as a double.
nx() - Method in interface net.imglib2.mesh.Vertex: X coordinate of vertex normal, as a double.
nx(int) - Method in class net.imglib2.mesh.alg.zslicer.Contour
nx(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
nx(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
nx(long) - Method in interface net.imglib2.mesh.Triangles: X coordinate of triangle's normal, as a double.
nx(long) - Method in interface net.imglib2.mesh.Vertices: X coordinate of vertex normal, as a double.
nxf() - Method in interface net.imglib2.mesh.Triangle: X coordinate of triangle's normal, as a float.
nxf() - Method in interface net.imglib2.mesh.Vertex: X coordinate of vertex normal, as a float.
nxf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
nxf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
nxf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
nxf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
nxf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
nxf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
nxf(long) - Method in interface net.imglib2.mesh.Triangles: X coordinate of triangle's normal, as a float.
nxf(long) - Method in interface net.imglib2.mesh.Vertices: X coordinate of vertex normal, as a float.
ny() - Method in interface net.imglib2.mesh.Triangle: Y coordinate of triangle's normal, as a double.
ny() - Method in interface net.imglib2.mesh.Vertex: Y coordinate of vertex normal, as a double.
ny(int) - Method in class net.imglib2.mesh.alg.zslicer.Contour
ny(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
ny(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
ny(long) - Method in interface net.imglib2.mesh.Triangles: Y coordinate of triangle's normal, as a double.
ny(long) - Method in interface net.imglib2.mesh.Vertices: Y coordinate of vertex normal, as a double.
nyf() - Method in interface net.imglib2.mesh.Triangle: Y coordinate of triangle's normal, as a float.
nyf() - Method in interface net.imglib2.mesh.Vertex: Y coordinate of vertex normal, as a float.
nyf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
nyf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
nyf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
nyf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
nyf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
nyf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
nyf(long) - Method in interface net.imglib2.mesh.Triangles: Y coordinate of triangle's normal, as a float.
nyf(long) - Method in interface net.imglib2.mesh.Vertices: Y coordinate of vertex normal, as a float.
nz() - Method in interface net.imglib2.mesh.Triangle: Z coordinate of triangle's normal, as a double.
nz() - Method in interface net.imglib2.mesh.Vertex: Z coordinate of vertex normal, as a double.
nz(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
nz(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
nz(long) - Method in interface net.imglib2.mesh.Triangles: Z coordinate of triangle's normal, as a double.
nz(long) - Method in interface net.imglib2.mesh.Vertices: Z coordinate of vertex normal, as a double.
nzf() - Method in interface net.imglib2.mesh.Triangle: Z coordinate of triangle's normal, as a float.
nzf() - Method in interface net.imglib2.mesh.Vertex: Z coordinate of vertex normal, as a float.
nzf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
nzf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
nzf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
nzf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
nzf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
nzf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
nzf(long) - Method in interface net.imglib2.mesh.Triangles: Z coordinate of triangle's normal, as a float.
nzf(long) - Method in interface net.imglib2.mesh.Vertices: Z coordinate of vertex normal, as a float.

O

open(InputStream) - Static method in class net.imglib2.mesh.io.ply.PLYMeshIO
open(String) - Static method in class net.imglib2.mesh.io.ply.PLYMeshIO
open(String) - Static method in class net.imglib2.mesh.io.stl.STLMeshIO
open(String) - Static method in class net.imglib2.mesh.io.xyz.XYZPointsIO

P

PLYMeshIO - Class in net.imglib2.mesh.io.ply: Routines for reading and writing PLY files.

Q

quicksort(double[]) - Static method in class net.imglib2.mesh.util.SortArray
quicksort(double[], int[]) - Static method in class net.imglib2.mesh.util.SortArray
quicksort(double[], int[], int, int) - Static method in class net.imglib2.mesh.util.SortArray
quicksort(TDoubleArrayList) - Static method in class net.imglib2.mesh.util.SortTrove
quicksort(TDoubleArrayList, int[]) - Static method in class net.imglib2.mesh.util.SortTrove
quicksort(TDoubleArrayList, int[], int, int) - Static method in class net.imglib2.mesh.util.SortTrove
quicksort(TLongArrayList, Comparator<Long>) - Static method in class net.imglib2.mesh.util.SortTrove

R

r1 - Variable in class net.imglib2.mesh.alg.EllipsoidFitter.Ellipsoid: The radius of the smallest axis of the ellipsoid.
r2 - Variable in class net.imglib2.mesh.alg.EllipsoidFitter.Ellipsoid: The radius of the middle axis of the ellipsoid.
r3 - Variable in class net.imglib2.mesh.alg.EllipsoidFitter.Ellipsoid: The radius of the largest axis of the ellipsoid.
RamerDouglasPeucker - Class in net.imglib2.mesh.alg.zslicer
RamerDouglasPeucker() - Constructor for class net.imglib2.mesh.alg.zslicer.RamerDouglasPeucker
rayIntersectsTriangle(long, double, double, double, double, double, double, double[]) - Method in class net.imglib2.mesh.alg.MollerTrumbore: Returns true if the specified ray intersects with the specified triangle in the mesh, and if yes, store the position of intersection in an array.
read(File, Mesh) - Static method in class net.imglib2.mesh.io.ply.PLYMeshIO
read(InputStream, Mesh) - Static method in class net.imglib2.mesh.io.ply.PLYMeshIO
read(Mesh, byte[]) - Static method in class net.imglib2.mesh.io.stl.STLMeshIO
read(Mesh, File) - Static method in class net.imglib2.mesh.io.stl.STLMeshIO
refine(Mesh) - Static method in class net.imglib2.mesh.util.Icosahedron: Creates a new, finer icosahedron, based on the one specified, by subdividing each triangle into 4 smaller triangle, with vertices still on the icosahedron.
remove(Object) - Method in class net.imglib2.mesh.alg.zslicer.Slice
removeAll(Collection<?>) - Method in class net.imglib2.mesh.alg.zslicer.Slice
removeDuplicateVertices(Mesh, int) - Static method in class net.imglib2.mesh.Meshes: Creates a new mesh from a given mesh without any duplicate vertices.
RemoveDuplicateVertices - Class in net.imglib2.mesh.alg
RemoveDuplicateVertices() - Constructor for class net.imglib2.mesh.alg.RemoveDuplicateVertices
reorder(double[], int[]) - Static method in class net.imglib2.mesh.util.SortArray
reorder(TDoubleArrayList, int[]) - Static method in class net.imglib2.mesh.util.SortTrove
reset() - Method in class net.imglib2.mesh.alg.MeshCursor
retainAll(Collection<?>) - Method in class net.imglib2.mesh.alg.zslicer.Slice

S

save(Mesh, String) - Static method in class net.imglib2.mesh.io.ply.PLYMeshIO
save(Mesh, String) - Static method in class net.imglib2.mesh.io.stl.STLMeshIO
scale(Mesh, double[]) - Static method in class net.imglib2.mesh.Meshes: Scales the vertices position by the amount specified by the array.
set(long, double, double, double) - Method in interface net.imglib2.mesh.Vertices: Overwrites the position of a vertex, sets normal and texture coordinates to 0
set(long, double, double, double, double, double, double, double, double) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
set(long, double, double, double, double, double, double, double, double) - Method in interface net.imglib2.mesh.Vertices: Overwrites a vertex's position, normal and texture coordinates.
setDistanceToFaceInFront(double) - Method in class net.imglib2.mesh.alg.hull.Vertex
setf(long, float, float, float) - Method in interface net.imglib2.mesh.Vertices: Overwrites the position of a vertex, sets normal and texture coordinates to 0
setf(long, float, float, float, float, float, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
setf(long, float, float, float, float, float, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
setf(long, float, float, float, float, float, float, float, float) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
setf(long, float, float, float, float, float, float, float, float) - Method in interface net.imglib2.mesh.Vertices: Overwrites a vertex's position, normal and texture coordinates.
setNormal(long, double, double, double) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
setNormal(long, double, double, double) - Method in interface net.imglib2.mesh.Vertices: Overwrites a vertex's normal.
setNormalf(long, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
setNormalf(long, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
setNormalf(long, float, float, float) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
setNormalf(long, float, float, float) - Method in interface net.imglib2.mesh.Vertices: Overwrites a vertex's normal.
setPosition(long, double, double, double) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
setPosition(long, double, double, double) - Method in interface net.imglib2.mesh.Vertices: Overwrites a vertex's position.
setPositionf(long, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
setPositionf(long, float, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
setPositionf(long, float, float, float) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
setPositionf(long, float, float, float) - Method in interface net.imglib2.mesh.Vertices: Overwrites a vertex's position.
setTexture(long, double, double) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
setTexture(long, double, double) - Method in interface net.imglib2.mesh.Vertices: Overwrites a vertex's texture coordinates.
setTexturef(long, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
setTexturef(long, float, float) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
setTexturef(long, float, float) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
setTexturef(long, float, float) - Method in interface net.imglib2.mesh.Vertices: Overwrites a vertex's texture coordinates.
setVertexInFront(Vertex, double) - Method in class net.imglib2.mesh.alg.hull.TriangularFacet: Adds a vertex to the points in front of this facet.
simpleMerge(TriangularFacet) - Method in class net.imglib2.mesh.alg.hull.Horizon: Merges another facet to this facet.
simplify(float, double) - Method in class net.imglib2.mesh.alg.SimplifyMesh: Begins the simplification process.
simplify(Contour, double) - Static method in class net.imglib2.mesh.alg.zslicer.RamerDouglasPeucker: Given a contour, build a similar contour with fewer points.
simplify(Slice, double) - Static method in class net.imglib2.mesh.alg.zslicer.RamerDouglasPeucker: Applies the Ramer-Douglas-Peucker algorithm to the contours of a slice.
simplify(Mesh, float, float) - Static method in class net.imglib2.mesh.Meshes: Simplifies a given mesh.
SimplifyMesh - Class in net.imglib2.mesh.alg
SimplifyMesh(Mesh) - Constructor for class net.imglib2.mesh.alg.SimplifyMesh
size() - Method in class net.imglib2.mesh.alg.MeshIterable
size() - Method in class net.imglib2.mesh.alg.zslicer.Contour
size() - Method in class net.imglib2.mesh.alg.zslicer.Slice
size() - Method in interface net.imglib2.mesh.Triangles: Number of triangles in the collection as an int value.
size() - Method in interface net.imglib2.mesh.Vertices: Number of vertices in the collection as an int value.
sizel() - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
sizel() - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
sizel() - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
sizel() - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
sizel() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
sizel() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
sizel() - Method in interface net.imglib2.mesh.Triangles: Number of triangles in the collection as a long value.
sizel() - Method in interface net.imglib2.mesh.Vertices: Number of vertices in the collection as a long value.
slice(Mesh, double, double) - Static method in class net.imglib2.mesh.alg.zslicer.ZSlicer: Slice a mesh by a Z-plane.
Slice - Class in net.imglib2.mesh.alg.zslicer: Class that represents the intersection of a closed 3D mesh (manifold and two-manifold) with a plane.
slices(Mesh, double[], double) - Static method in class net.imglib2.mesh.alg.zslicer.ZSlicer
smooth(Mesh) - Static method in class net.imglib2.mesh.alg.TaubinSmoothing: Smooth the specified mesh using the Taubin smoothing algorithm, with default parameters.
smooth(Mesh, int, double) - Static method in class net.imglib2.mesh.alg.TaubinSmoothing: Smooth the specified mesh using the Taubin smoothing algorithm, using cotangent weights.
smooth(Mesh, int, double, double, TaubinSmoothing.TaubinWeightType) - Static method in class net.imglib2.mesh.alg.TaubinSmoothing: Smooth the specified mesh using the Taubin smoothing algorithm.
solidity(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Returns the solidity of a mesh.
solidity(Mesh, Mesh) - Static method in class net.imglib2.mesh.MeshStats: Returns the solidity of a mesh.
SortArray - Class in net.imglib2.mesh.util: Utilities to sort an array and return the sorting index to sort other lists with.
SortArray() - Constructor for class net.imglib2.mesh.util.SortArray
sortBy(int[], double[], int, int) - Static method in class net.imglib2.mesh.util.SortBy
SortBy - Class in net.imglib2.mesh.util: Utilities to sort an index array pointing to values in another array.
SortBy() - Constructor for class net.imglib2.mesh.util.SortBy
SortTrove - Class in net.imglib2.mesh.util: Utilities to sort a Trove list and return the sorting index to sort other lists with.
SortTrove() - Constructor for class net.imglib2.mesh.util.SortTrove
spareness(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Describes the spareness of a Mesh.
sphere(RealLocalizable, double) - Static method in class net.imglib2.mesh.util.Icosahedron
sphere(RealLocalizable, double, int) - Static method in class net.imglib2.mesh.util.Icosahedron
sphericity(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Returns the sphericity of a mesh.
STLMeshIO - Class in net.imglib2.mesh.io.stl: Routines for reading and writing STL files.
surfaceArea(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Returns the surface area of a mesh.

T

TaubinSmoothing - Class in net.imglib2.mesh.alg: Taubin's mesh smoothing algorithm.
TaubinSmoothing() - Constructor for class net.imglib2.mesh.alg.TaubinSmoothing
TaubinSmoothing.TaubinWeightType - Enum in net.imglib2.mesh.alg: The weight to use when accumlating contribution for neighborhood edges in Taubin smoothing.
texCoords() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
toArray() - Method in class net.imglib2.mesh.alg.zslicer.Slice
toArray(T[]) - Method in class net.imglib2.mesh.alg.zslicer.Slice
toString() - Method in class net.imglib2.mesh.alg.EllipsoidFitter.Ellipsoid
toString() - Method in class net.imglib2.mesh.alg.zslicer.Contour
translate(Mesh, double[]) - Static method in class net.imglib2.mesh.Meshes: Translates the vertices position by the amount specified by the array.
translate(Mesh, RealLocalizable) - Static method in class net.imglib2.mesh.view.TranslateMesh
TranslateMesh - Class in net.imglib2.mesh.view: Read-only view of a mesh where vertices are translated by a fixed amount.
translateScale(Mesh, double[], double[]) - Static method in class net.imglib2.mesh.Meshes: Translates the vertices position by the amount specified by the array, then scales the coordinates.
Triangle - Interface in net.imglib2.mesh: One triangle of a Triangles collection.
triangles() - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh
triangles() - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh
triangles() - Method in class net.imglib2.mesh.impl.nio.BufferMesh
triangles() - Method in interface net.imglib2.mesh.Mesh: The mesh's collection of triangles.
triangles() - Method in class net.imglib2.mesh.view.TranslateMesh
Triangles - Interface in net.imglib2.mesh: Collection of triangles for a Mesh.
Triangles() - Constructor for class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
Triangles() - Constructor for class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
Triangles(IntBuffer, FloatBuffer) - Constructor for class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
triangleStr(Mesh, long) - Static method in class net.imglib2.mesh.util.MeshUtil: Produces a string representation of a triangle.
TriangularFacet - Class in net.imglib2.mesh.alg.hull: This is the triangle implementation of Facet Interface.
TriangularFacet() - Constructor for class net.imglib2.mesh.alg.hull.TriangularFacet: Creates a new empty facet.
TriangularFacet(Vertex, Vertex, Vertex) - Constructor for class net.imglib2.mesh.alg.hull.TriangularFacet: Creates a new facet of three vertices.

U

u() - Method in interface net.imglib2.mesh.Vertex: U value of vertex texture coordinate, as a double.
u(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
u(long) - Method in interface net.imglib2.mesh.Vertices: U value of vertex texture coordinate, as a double.
uf() - Method in interface net.imglib2.mesh.Vertex: U value of vertex texture coordinate, as a float.
uf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
uf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
uf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
uf(long) - Method in interface net.imglib2.mesh.Vertices: U value of vertex texture coordinate, as a float.

V

v() - Method in interface net.imglib2.mesh.Vertex: V value of vertex texture coordinate, as a double.
v(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
v(long) - Method in interface net.imglib2.mesh.Vertices: V value of vertex texture coordinate, as a double.
v0x() - Method in interface net.imglib2.mesh.Triangle: X coordinate of triangle's first vertex, as a double.
v0xf() - Method in interface net.imglib2.mesh.Triangle: X coordinate of triangle's first vertex, as a float.
v0y() - Method in interface net.imglib2.mesh.Triangle: Y coordinate of triangle's first vertex, as a double.
v0yf() - Method in interface net.imglib2.mesh.Triangle: Y coordinate of triangle's first vertex, as a float.
v0z() - Method in interface net.imglib2.mesh.Triangle: Z coordinate of triangle's first vertex, as a double.
v0zf() - Method in interface net.imglib2.mesh.Triangle: Z coordinate of triangle's first vertex, as a float.
v1x() - Method in interface net.imglib2.mesh.Triangle: X coordinate of triangle's second vertex, as a double.
v1xf() - Method in interface net.imglib2.mesh.Triangle: X coordinate of triangle's second vertex, as a float.
v1y() - Method in interface net.imglib2.mesh.Triangle: Y coordinate of triangle's second vertex, as a double.
v1yf() - Method in interface net.imglib2.mesh.Triangle: Y coordinate of triangle's second vertex, as a float.
v1z() - Method in interface net.imglib2.mesh.Triangle: Z coordinate of triangle's second vertex, as a double.
v1zf() - Method in interface net.imglib2.mesh.Triangle: Z coordinate of triangle's second vertex, as a float.
v2x() - Method in interface net.imglib2.mesh.Triangle: X coordinate of triangle's third vertex, as a double.
v2xf() - Method in interface net.imglib2.mesh.Triangle: X coordinate of triangle's third vertex, as a float.
v2y() - Method in interface net.imglib2.mesh.Triangle: Y coordinate of triangle's third vertex, as a double.
v2yf() - Method in interface net.imglib2.mesh.Triangle: Y coordinate of triangle's third vertex, as a float.
v2z() - Method in interface net.imglib2.mesh.Triangle: Z coordinate of triangle's third vertex, as a double.
v2zf() - Method in interface net.imglib2.mesh.Triangle: Z coordinate of triangle's third vertex, as a float.
valueOf(String) - Static method in enum net.imglib2.mesh.alg.TaubinSmoothing.TaubinWeightType: Returns the enum constant of this type with the specified name.
values() - Static method in enum net.imglib2.mesh.alg.TaubinSmoothing.TaubinWeightType: Returns an array containing the constants of this enum type, in the order they are declared.
Vertex - Class in net.imglib2.mesh.alg.hull: Represents vertices of the hull, as well as the points from which it is formed.
Vertex - Interface in net.imglib2.mesh: One vertex of a Vertices collection.
Vertex(double, double, double) - Constructor for class net.imglib2.mesh.alg.hull.Vertex
vertex0() - Method in interface net.imglib2.mesh.Triangle: Index of first vertex in the triangle.
vertex0(int) - Method in interface net.imglib2.mesh.Triangles: Index of first vertex in a triangle, as an int.
vertex0(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
vertex0(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
vertex0(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
vertex0(long) - Method in interface net.imglib2.mesh.Triangles: Index of first vertex in a triangle.
vertex1() - Method in interface net.imglib2.mesh.Triangle: Index of second vertex in the triangle.
vertex1(int) - Method in interface net.imglib2.mesh.Triangles: Index of second vertex in a triangle, as an int.
vertex1(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
vertex1(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
vertex1(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
vertex1(long) - Method in interface net.imglib2.mesh.Triangles: Index of second vertex in a triangle.
vertex2() - Method in interface net.imglib2.mesh.Triangle: Index of third vertex in the triangle.
vertex2(int) - Method in interface net.imglib2.mesh.Triangles: Index of third vertex in a triangle, as an int.
vertex2(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Triangles
vertex2(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Triangles
vertex2(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Triangles
vertex2(long) - Method in interface net.imglib2.mesh.Triangles: Index of third vertex in a triangle.
vertices() - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh
vertices() - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh
vertices() - Method in class net.imglib2.mesh.impl.nio.BufferMesh
vertices() - Method in interface net.imglib2.mesh.Mesh: The mesh's collection of vertices.
vertices() - Method in class net.imglib2.mesh.view.TranslateMesh
Vertices - Interface in net.imglib2.mesh: Collection of vertices for a Mesh.
Vertices() - Constructor for class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
Vertices() - Constructor for class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
Vertices(FloatBuffer, FloatBuffer, FloatBuffer) - Constructor for class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
verticesCount(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Describes the number of vertices on the surface of a Mesh.
verts() - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
vf() - Method in interface net.imglib2.mesh.Vertex: V value of vertex texture coordinate, as a float.
vf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
vf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
vf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
vf(long) - Method in interface net.imglib2.mesh.Vertices: V value of vertex texture coordinate, as a float.
volume(Mesh) - Static method in class net.imglib2.mesh.MeshStats: Computes the volume of the specified mesh.
Voxelization - Class in net.imglib2.mesh.alg: This is a voxelizer that produces a binary image with values filled in along the surface of the mesh.
voxelize(Mesh, int, int, int) - Static method in class net.imglib2.mesh.alg.Voxelization: Voxelizes mesh
voxelize(Mesh, Dimensions) - Static method in class net.imglib2.mesh.alg.Voxelization: Voxelizes mesh
voxelize(Mesh, RandomAccessibleInterval<B>) - Static method in class net.imglib2.mesh.alg.Voxelization: Voxelizes mesh

W

write(Mesh) - Static method in class net.imglib2.mesh.io.stl.STLMeshIO: Writes the facets into a byte[] that can then be saved into a file
writeAscii(Mesh) - Static method in class net.imglib2.mesh.io.ply.PLYMeshIO
writeBinary(Mesh) - Static method in class net.imglib2.mesh.io.ply.PLYMeshIO

X

x() - Method in interface net.imglib2.mesh.Vertex: X position of vertex, as a double.
x(int) - Method in class net.imglib2.mesh.alg.zslicer.Contour
x(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
x(long) - Method in interface net.imglib2.mesh.Vertices: X position of a vertex, as a double.
xf() - Method in interface net.imglib2.mesh.Vertex: X position of vertex, as a float.
xf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
xf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
xf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
xf(long) - Method in interface net.imglib2.mesh.Vertices: X position of a vertex, as a float.
xRayCast(double, TDoubleArrayList, double) - Method in class net.imglib2.mesh.alg.zslicer.Slice: Computes the position of the intersection of this slice (as a contour collection) with the ray parallel to the X axis and of ordinate y.
xRayCast(double, TDoubleArrayList, TDoubleArrayList, double) - Method in class net.imglib2.mesh.alg.zslicer.Slice: Computes the position of the intersection of this slice (as a contour collection) with the ray parallel to the X axis and of ordinate y, and measure the projected normal value at these intersections.
XYZPointsIO - Class in net.imglib2.mesh.io.xyz: Routines for reading XYZ files.

Y

y() - Method in interface net.imglib2.mesh.Vertex: Y position of vertex, as a double.
y(int) - Method in class net.imglib2.mesh.alg.zslicer.Contour
y(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
y(long) - Method in interface net.imglib2.mesh.Vertices: Y position of a vertex, as a double.
yf() - Method in interface net.imglib2.mesh.Vertex: Y position of vertex, as a float.
yf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
yf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
yf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
yf(long) - Method in interface net.imglib2.mesh.Vertices: Y position of a vertex, as a float.

Z

z() - Method in interface net.imglib2.mesh.Vertex: Z position of vertex, as a double.
z(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
z(long) - Method in interface net.imglib2.mesh.Vertices: Z position of a vertex, as a double.
zf() - Method in interface net.imglib2.mesh.Vertex: Z position of vertex, as a float.
zf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveDoubleMesh.Vertices
zf(long) - Method in class net.imglib2.mesh.impl.naive.NaiveFloatMesh.Vertices
zf(long) - Method in class net.imglib2.mesh.impl.nio.BufferMesh.Vertices
zf(long) - Method in interface net.imglib2.mesh.Vertices: Z position of a vertex, as a float.
ZSlicer - Class in net.imglib2.mesh.alg.zslicer: Slice a mesh by a Z plane.
ZSlicer() - Constructor for class net.imglib2.mesh.alg.zslicer.ZSlicer

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