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A

AbstractProgressable - Class in net.imagej.updater.util
Abstract superclass for Progressable implementations.
AbstractProgressable() - Constructor for class net.imagej.updater.util.AbstractProgressable
 
AbstractUploader - Class in net.imagej.updater
Abstract base class for ImageJ upload mechanisms.
AbstractUploader() - Constructor for class net.imagej.updater.AbstractUploader
 
actionResolution(String, FileObject, FileObject.Action...) - Method in class net.imagej.updater.Conflicts
 
actionResolution(String, Iterable<FileObject>, FileObject.Action...) - Method in class net.imagej.updater.Conflicts
 
actionSpecified() - Method in class net.imagej.updater.FileObject
 
activateUpdateSite(UpdateSite, Progress) - Method in class net.imagej.updater.FilesCollection
Activate the given update site.
add(FileObject) - Method in class net.imagej.updater.FilesCollection
 
add(FileObject, FileObject) - Method in class net.imagej.updater.FilesCollection.DependencyMap
 
addAuthor(String) - Method in class net.imagej.updater.FileObject
 
addCategory(String) - Method in class net.imagej.updater.FileObject
 
addClassAndInterfaces(Set<String>, Set<String>, String) - Method in class net.imagej.updater.util.DependencyAnalyzer
 
addConflict(String, String, boolean, List<File>) - Method in class net.imagej.updater.Checksummer
 
addDependency(FilesCollection, FileObject) - Method in class net.imagej.updater.FileObject
 
addDependency(String, File) - Method in class net.imagej.updater.FileObject
 
addDependency(String, long, boolean) - Method in class net.imagej.updater.FileObject
 
addDependency(Dependency) - Method in class net.imagej.updater.FileObject
 
addItem(Object) - Method in class net.imagej.updater.FilesUploader.VerifyTimestamp
 
addItem(Object) - Method in class net.imagej.updater.util.AbstractProgressable
 
addItem(Object) - Method in interface net.imagej.updater.util.Progress
 
addItem(Object) - Method in class net.imagej.updater.util.StderrProgress
 
addLink(String) - Method in class net.imagej.updater.FileObject
 
addOrEditUploadSite(List<String>, boolean) - Method in class net.imagej.updater.CommandLine
 
addOrEditUploadSite(String, String, String, String, boolean) - Method in class net.imagej.updater.CommandLine
 
addPlatform(String) - Method in class net.imagej.updater.FileObject
 
addPreviousVersion(String, long, String) - Method in class net.imagej.updater.FileObject
Deprecated.
addPreviousVersion(FileObject.Version) - Method in class net.imagej.updater.FileObject
 
addPreviousVersion(String, long, String, long) - Method in class net.imagej.updater.FileObject
 
addProgress(Progress) - Method in class net.imagej.updater.util.AbstractProgressable
 
addProgress(Progress) - Method in interface net.imagej.updater.util.Progressable
 
addUpdateSite(String, String, String, String, long) - Method in class net.imagej.updater.FilesCollection
 
addUpdateSite(UpdateSite) - Method in class net.imagej.updater.FilesCollection
 
addUpdateSite(String, UpdateSite) - Method in class net.imagej.updater.FilesCollection
 
addUploadSites(List<String>, List<String>) - Method in class net.imagej.updater.CommandLine
 
addWindow(Frame) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
addWindow(Frame) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
addWindow(Frame) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
analyzeByteCode(InputStream, File) - Static method in class net.imagej.updater.Diff
Inspect the byte code of a class file.
analyzeByteCode(InputStream, boolean) - Static method in class net.imagej.updater.Diff
Analyze the byte code of a class file.
analyzeDependencies(FileObject) - Method in class net.imagej.updater.FilesCollection
 
and(FilesCollection.Filter, FilesCollection.Filter) - Method in class net.imagej.updater.FilesCollection
 
applyIfApproved() - Method in class net.imagej.updater.URLChange
 
applySitesURLUpdates(FilesCollection, List<URLChange>) - Static method in class net.imagej.updater.util.AvailableSites
Apply prepared changes to update site URLs
askChoice(String[]) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
atLineStart - Variable in class net.imagej.updater.util.SkipHashedLines
 
Attribute(int) - Constructor for class net.imagej.updater.util.ByteCodeAnalyzer.Attribute
 
authors - Variable in class net.imagej.updater.FileObject
 
AvailableSites - Class in net.imagej.updater.util
Utility class for parsing the list of available update sites.

B

bothInstallAndUninstall(FileObject, FilesCollection, FilesCollection) - Method in class net.imagej.updater.Conflicts
 
ByteCodeAnalyzer - Class in net.imagej.updater.util
An analyzer to find out which .jar files a given .jar file depends on.
ByteCodeAnalyzer(byte[]) - Constructor for class net.imagej.updater.util.ByteCodeAnalyzer
 
ByteCodeAnalyzer(byte[], boolean) - Constructor for class net.imagej.updater.util.ByteCodeAnalyzer
 
ByteCodeAnalyzer(byte[], ByteCodeAnalyzer.Mode) - Constructor for class net.imagej.updater.util.ByteCodeAnalyzer
 
ByteCodeAnalyzer.Attribute - Class in net.imagej.updater.util
 
ByteCodeAnalyzer.Field - Class in net.imagej.updater.util
 
ByteCodeAnalyzer.Interface - Class in net.imagej.updater.util
 
ByteCodeAnalyzer.Method - Class in net.imagej.updater.util
 
ByteCodeAnalyzer.Mode - Enum in net.imagej.updater.util
 
bytes - Variable in class net.imagej.updater.FilesUploader.DbXmlFile
 

C

cacheFile(URL, boolean) - Method in class net.imagej.updater.Diff
Cache a file locally.
calculateTotalSize(List<Uploadable>) - Method in class net.imagej.updater.AbstractUploader
 
calculateTotalSize(List<Uploadable>) - Method in interface net.imagej.updater.Uploader
TODO
cancel() - Method in class net.imagej.updater.util.Downloader
 
cancelled - Variable in class net.imagej.updater.util.Downloader
 
canExecute(File) - Static method in class net.imagej.updater.util.UpdaterUtil
 
canWrite(File) - Static method in class net.imagej.updater.UpToDate
 
changes() - Method in class net.imagej.updater.FilesCollection
 
characters(char[], int, int) - Method in class net.imagej.updater.POMParser
 
characters(char[], int, int) - Method in class net.imagej.updater.XMLFileReader
 
check() - Static method in class net.imagej.updater.UpToDate
Check the update status of the current ImageJ installation.
check(File) - Static method in class net.imagej.updater.UpToDate
Check the update status of a given ImageJ installation.
checkConsistency() - Method in class net.imagej.updater.FilesCollection
 
CheckForUpdates - Class in net.imagej.updater
This plugin checks whether updates are available, and prompts the user to launch the updater if so.
CheckForUpdates() - Constructor for class net.imagej.updater.CheckForUpdates
 
checkHTTPSSupport(LogService) - Static method in class net.imagej.updater.util.HTTPSUtil
Calls HTTPSUtil.secureURL to check whether the HTTPS certificate can be handled by the JVM.
checksum - Variable in class net.imagej.updater.Checksummer.StringAndFile
 
checksum - Variable in class net.imagej.updater.FileObject.Version
 
Checksummer - Class in net.imagej.updater
A class to checksum and timestamp all the files shown in the Updater's UI.
Checksummer(FilesCollection, Progress) - Constructor for class net.imagej.updater.Checksummer
 
Checksummer.StringAndFile - Class in net.imagej.updater
 
chooseUploadSite(String) - Method in class net.imagej.updater.CommandLine
 
Class2JarFilesMap - Class in net.imagej.updater.util
Maps class names to the .jar files containing them.
Class2JarFilesMap(File) - Constructor for class net.imagej.updater.util.Class2JarFilesMap
 
clone(Iterable<FileObject>) - Method in class net.imagej.updater.FilesCollection
 
clone() - Method in class net.imagej.updater.UpdateSite
 
close() - Method in class net.imagej.updater.DllFile
Closes the underlying RandomAccessFile.
CommandLine - Class in net.imagej.updater
This is the command-line interface into the ImageJ Updater.
CommandLine() - Constructor for class net.imagej.updater.CommandLine
Deprecated.
CommandLine(File, int) - Constructor for class net.imagej.updater.CommandLine
 
CommandLine(File, int, Progress) - Constructor for class net.imagej.updater.CommandLine
 
CommandLine.ConsoleAuthenticator - Class in net.imagej.updater
 
CommandLine.ConsoleUserInterface - Class in net.imagej.updater
 
CommandLine.FileFilter - Class in net.imagej.updater
 
compareTo(FileObject.Version) - Method in class net.imagej.updater.FileObject.Version
 
compareTo(UpdateSite) - Method in class net.imagej.updater.UpdateSite
 
completeMetadataFrom(FileObject) - Method in class net.imagej.updater.FileObject
Fill unset metadata with metadata from another object
Conflict(FileObject, String, Conflicts.Resolution...) - Constructor for class net.imagej.updater.Conflicts.Conflict
Deprecated.
Conflict(boolean, FileObject, String, Conflicts.Resolution...) - Constructor for class net.imagej.updater.Conflicts.Conflict
Deprecated.
Conflict(boolean, boolean, FileObject, String, Conflicts.Resolution...) - Constructor for class net.imagej.updater.Conflicts.Conflict
Deprecated.
Conflict(boolean, boolean, String, String, Conflicts.Resolution...) - Constructor for class net.imagej.updater.Conflicts.Conflict
Deprecated.
Conflict(Conflicts.Conflict.Severity, FileObject, String, Conflicts.Resolution...) - Constructor for class net.imagej.updater.Conflicts.Conflict
 
Conflict(Conflicts.Conflict.Severity, String, String, Conflicts.Resolution...) - Constructor for class net.imagej.updater.Conflicts.Conflict
 
conflictingVersions(FileObject, File, String) - Method in class net.imagej.updater.Conflicts
 
Conflicts - Class in net.imagej.updater
A class describing conflicts in what is selected for updating/uploading.
Conflicts(FilesCollection) - Constructor for class net.imagej.updater.Conflicts
 
conflicts - Variable in class net.imagej.updater.Conflicts
 
conflicts - Variable in class net.imagej.updater.FilesCollection
 
Conflicts.Conflict - Class in net.imagej.updater
An upload or download conflict requiring user resolution.
Conflicts.Conflict.Severity - Enum in net.imagej.updater
 
Conflicts.Notice - Class in net.imagej.updater
Part of the conflict list, but really only a non-critical notice.
Conflicts.Resolution - Class in net.imagej.updater
 
console - Variable in class net.imagej.updater.CommandLine.ConsoleAuthenticator
 
console - Variable in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
ConsoleAuthenticator() - Constructor for class net.imagej.updater.CommandLine.ConsoleAuthenticator
 
ConsoleUserInterface() - Constructor for class net.imagej.updater.CommandLine.ConsoleUserInterface
 
containsDebugInfo() - Method in class net.imagej.updater.util.ByteCodeAnalyzer.Attribute
 
containsDebugInfo() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
containsDebugInfo() - Method in class net.imagej.updater.util.ByteCodeAnalyzer.Method
 
containsDebugInfo(String) - Static method in class net.imagej.updater.util.DependencyAnalyzer
 
convert(List<Checksummer.StringAndFile>) - Static method in class net.imagej.updater.Checksummer
 
copy(InputStream, OutputStream, boolean, boolean) - Static method in class net.imagej.updater.Diff
Copy bytes from an InputStream to an OutputStream.
count - Variable in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
count - Variable in class net.imagej.updater.util.Downloader
 
create(UpdateSite, String) - Static method in class net.imagej.updater.URLChange
Proposes a new URL for this update site.
createHandler(OutputStream) - Method in class net.imagej.updater.XMLFileWriter
 
current - Variable in class net.imagej.updater.FileObject
 
current() - Static method in class net.imagej.updater.util.Platforms
Gets the short platform name for the currently running platform, including both operating system and CPU architecture.
currentTimestamp() - Static method in class net.imagej.updater.util.UpdaterUtil
 

D

DbXmlFile() - Constructor for class net.imagej.updater.FilesUploader.DbXmlFile
 
deactivateUpdateSite(List<String>) - Method in class net.imagej.updater.CommandLine
Turn off an update site without removing it from the list.
deactivateUpdateSite(String...) - Method in class net.imagej.updater.CommandLine
deactivateUpdateSite(UpdateSite) - Method in class net.imagej.updater.FilesCollection
Deactivates the given update site.
debug(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
debug(String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
debug(String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
DEFAULT_UPDATE_SITE - Static variable in class net.imagej.updater.FilesCollection
 
DefaultUpdateService - Class in net.imagej.updater
Default service for managing ImageJ updates.
DefaultUpdateService() - Constructor for class net.imagej.updater.DefaultUpdateService
 
DefaultUploaderService - Class in net.imagej.updater
Default service for managing available ImageJ upload mechanisms.
DefaultUploaderService() - Constructor for class net.imagej.updater.DefaultUploaderService
 
delete(FileObject) - Method in class net.imagej.updater.CommandLine
 
deleteFile(String, File) - Method in class net.imagej.updater.Conflicts
 
deleteOrThrowException(File) - Static method in class net.imagej.updater.Installer
 
dependencies - Variable in class net.imagej.updater.FileObject
 
Dependency - Class in net.imagej.updater
A simple data structure for storing information about a dependency.
Dependency(String, long, boolean) - Constructor for class net.imagej.updater.Dependency
 
DependencyAnalyzer - Class in net.imagej.updater.util
This class generates a list of dependencies for a given file.
DependencyAnalyzer(File) - Constructor for class net.imagej.updater.util.DependencyAnalyzer
 
DependencyMap() - Constructor for class net.imagej.updater.FilesCollection.DependencyMap
 
dependencyNotUploaded(FileObject, String) - Method in class net.imagej.updater.Conflicts
 
dependencyRemoved(FileObject, String) - Method in class net.imagej.updater.Conflicts
 
dependencyResolution(String, FileObject, String, String) - Method in class net.imagej.updater.Conflicts
 
description - Variable in class net.imagej.updater.FileObject
 
descriptionFromPOM - Variable in class net.imagej.updater.FileObject
 
diff(List<String>) - Method in class net.imagej.updater.CommandLine
 
Diff - Class in net.imagej.updater
Show differences between remote and local versions of files.
Diff(PrintStream) - Constructor for class net.imagej.updater.Diff
Deprecated.
Diff.Mode - Enum in net.imagej.updater
 
directories - Static variable in class net.imagej.updater.Checksummer
 
DllFile - Class in net.imagej.updater
Analyses .dll files whether they are really different.
DllFile(File) - Constructor for class net.imagej.updater.DllFile
Constructs a .dll file parser.
doesPlatformMatch() - Method in class net.imagej.updater.FilesCollection
 
done() - Method in class net.imagej.updater.FilesUploader.VerifyTimestamp
 
done() - Method in class net.imagej.updater.util.AbstractProgressable
 
done() - Method in interface net.imagej.updater.util.Progress
 
done() - Method in class net.imagej.updater.util.StderrProgress
 
dotCounter - Variable in class net.imagej.updater.util.StderrProgress
 
downgrade(List<String>) - Method in class net.imagej.updater.CommandLine
 
download(FileObject) - Method in class net.imagej.updater.CommandLine
 
download(Downloadable) - Method in class net.imagej.updater.util.Downloader
 
Downloadable - Interface in net.imagej.updater.util
Represents a file to be downloaded from an update site.
Downloader - Class in net.imagej.updater.util
Direct responsibility: Download a list of files given their respective URLs to their respective destinations.
Downloader() - Constructor for class net.imagej.updater.util.Downloader
Deprecated.
Downloader(Progress) - Constructor for class net.imagej.updater.util.Downloader
 
downloadIndexAndChecksum(Progress) - Method in class net.imagej.updater.FilesCollection
 

E

end - Static variable in class net.imagej.updater.util.StderrProgress
 
endDocument() - Method in class net.imagej.updater.POMParser
 
endDocument() - Method in class net.imagej.updater.XMLFileReader
 
endElement(String, String, String) - Method in class net.imagej.updater.POMParser
 
endElement(String, String, String) - Method in class net.imagej.updater.XMLFileReader
 
endsWith(String) - Method in class net.imagej.updater.FilesCollection
 
equals(Object) - Method in class net.imagej.updater.Checksummer.StringAndFile
 
equals(File, URL) - Static method in class net.imagej.updater.DllFile
Compares two .dll files, skipping time stamp entries, checksums and the likes.
equals(URLConnection) - Method in class net.imagej.updater.DllFile
Determines whether two .dll files are functionally equal.
equals(Object) - Method in class net.imagej.updater.FileObject.Version
 
equals(FileObject.Version) - Method in class net.imagej.updater.FileObject.Version
 
equals(Object) - Method in class net.imagej.updater.UpdateSite
 
error(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
error - Variable in class net.imagej.updater.util.Downloader
 
error(String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
error(String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
error(SAXParseException) - Method in class net.imagej.updater.XMLFileErrorHandler
 
exclude(String, String) - Static method in class net.imagej.updater.util.DependencyAnalyzer
Exclude some dependencies.
executable - Variable in class net.imagej.updater.FileObject
 
exists(File) - Method in class net.imagej.updater.Checksummer
 
extensions - Static variable in class net.imagej.updater.Checksummer
 

F

fatalError(SAXParseException) - Method in class net.imagej.updater.XMLFileErrorHandler
 
Field(int) - Constructor for class net.imagej.updater.util.ByteCodeAnalyzer.Field
 
file - Variable in class net.imagej.updater.UploadableFile
 
fileExists(String) - Method in class net.imagej.updater.FilesCollection
 
FileFilter(List<String>) - Constructor for class net.imagej.updater.CommandLine.FileFilter
 
filename - Variable in class net.imagej.updater.Conflicts.Conflict
 
filename - Variable in class net.imagej.updater.Dependency
 
filename - Variable in class net.imagej.updater.FileObject
 
filename - Variable in class net.imagej.updater.FileObject.Version
 
filename - Variable in class net.imagej.updater.UploadableFile
 
fileNames - Variable in class net.imagej.updater.CommandLine.FileFilter
 
FileObject - Class in net.imagej.updater
This class represents a file handled by the updater.
FileObject(String, String, long, String, long, FileObject.Status) - Constructor for class net.imagej.updater.FileObject
 
FileObject.Action - Enum in net.imagej.updater
 
FileObject.Status - Enum in net.imagej.updater
 
FileObject.Version - Class in net.imagej.updater
 
files - Variable in class net.imagej.updater.CommandLine
 
FilesCollection - Class in net.imagej.updater
This class represents the database of available FileObjects.
FilesCollection(File) - Constructor for class net.imagej.updater.FilesCollection
This constructor takes the app root primarily for testing purposes.
FilesCollection(LogService, File) - Constructor for class net.imagej.updater.FilesCollection
This constructor takes the app root primarily for testing purposes.
FilesCollection.DependencyMap - Class in net.imagej.updater
 
FilesCollection.Filter - Interface in net.imagej.updater
 
FilesCollection.FilteredIterator - Class in net.imagej.updater
 
filesize - Variable in class net.imagej.updater.FileObject
 
filesize - Variable in class net.imagej.updater.UploadableFile
 
FilesUploader - Class in net.imagej.updater
This class is responsible for writing updates to server, upon given the updated file records.
FilesUploader(FilesCollection, String) - Constructor for class net.imagej.updater.FilesUploader
FilesUploader(UploaderService, FilesCollection, String) - Constructor for class net.imagej.updater.FilesUploader
FilesUploader(UploaderService, FilesCollection, String, Progress) - Constructor for class net.imagej.updater.FilesUploader
 
FilesUploader.DbXmlFile - Class in net.imagej.updater
 
FilesUploader.VerifyTimestamp - Class in net.imagej.updater
 
FileUploader - Class in net.imagej.updater
This FileUploader is highly specialized to upload files and XML information over to ImageJ2 Update sites.
FileUploader() - Constructor for class net.imagej.updater.FileUploader
 
fillMetadataFromJar(FileObject, File) - Static method in class net.imagej.updater.POMParser
 
filter(FilesCollection.Filter, Iterable<FileObject>) - Static method in class net.imagej.updater.FilesCollection
 
filter(String, Iterable<FileObject>) - Static method in class net.imagej.updater.FilesCollection
 
filter(FilesCollection.Filter) - Method in class net.imagej.updater.FilesCollection
 
filter(InputStream, boolean) - Static method in class net.imagej.updater.util.FilterManifest
 
filter(BufferedReader, boolean) - Static method in class net.imagej.updater.util.FilterManifest
 
FilterManifest - Class in net.imagej.updater.util
A helper class for the Checksummer.
FilterManifest(InputStream) - Constructor for class net.imagej.updater.util.FilterManifest
 
FilterManifest(InputStream, boolean) - Constructor for class net.imagej.updater.util.FilterManifest
 
FilterManifest.Skip - Enum in net.imagej.updater.util
 
findNext() - Method in class net.imagej.updater.FilesCollection.FilteredIterator
 
fixImageJUserSiteProtocol(String) - Static method in class net.imagej.updater.util.HTTPSUtil
This method returns ImageJ user site URLs in the correct protocol (HTTPS or HTTPS), depending on what's supported.
format(String) - Static method in class net.imagej.updater.UpdateSite
 
forUpdateSite(String) - Method in class net.imagej.updater.FilesCollection
 
forUpdateSite(String, boolean) - Method in class net.imagej.updater.FilesCollection
 

G

get(int) - Method in class net.imagej.updater.FilesCollection
Deprecated.
get(Object) - Method in class net.imagej.updater.FilesCollection
 
get() - Static method in class net.imagej.updater.util.UpdaterUserInterface
 
getAction() - Method in class net.imagej.updater.FileObject
 
getActions() - Method in enum net.imagej.updater.FileObject.Status
Deprecated.
getActions(FileObject) - Method in class net.imagej.updater.FilesCollection
Deprecated.
getActions(Iterable<FileObject>) - Method in class net.imagej.updater.FilesCollection
Deprecated.
getAllAttributes() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getAllFields() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getAllInterfaces() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getAllMethods() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getAppRoot() - Method in class net.imagej.updater.FilesCollection
 
getAttributes() - Method in class net.imagej.updater.util.ByteCodeAnalyzer.Attribute
 
getAttributes(int) - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getAuthors() - Method in class net.imagej.updater.FileObject
 
getAvailableSites() - Static method in class net.imagej.updater.util.AvailableSites
 
getAvailableSites(Logger) - Static method in class net.imagej.updater.util.AvailableSites
 
getBaseName() - Method in class net.imagej.updater.FileObject
 
getCachedChecksums() - Method in class net.imagej.updater.Checksummer
 
getCategories() - Method in class net.imagej.updater.FileObject
 
getChecksum() - Method in class net.imagej.updater.FileObject
 
getClassNameConstant(int) - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getClassVersion(File) - Static method in class net.imagej.updater.Diff
Get the version of a class file.
getClassVersion(InputStream) - Static method in class net.imagej.updater.Diff
Get the version of a class file.
getConflict() - Method in class net.imagej.updater.Conflicts.Conflict
 
getConflicts(boolean) - Method in class net.imagej.updater.Conflicts
 
getConflicts() - Method in class net.imagej.updater.FilesCollection
 
getCurrentLastModified() - Method in class net.imagej.updater.FilesUploader
 
getDefaultUsername() - Method in class net.imagej.updater.FilesUploader
 
getDependencies() - Method in class net.imagej.updater.FileObject
 
getDependencies(boolean) - Method in class net.imagej.updater.FilesCollection
Gets a map listing all the dependencees of files to be installed or updated.
getDependencies(Iterable<FileObject>, boolean) - Method in class net.imagej.updater.FilesCollection
Gets a map listing all the dependencees of the specified files.
getDependencies(File, String) - Method in class net.imagej.updater.util.DependencyAnalyzer
 
getDependencies(File, FileObject) - Method in class net.imagej.updater.util.DependencyAnalyzer
 
getDescription() - Method in class net.imagej.updater.Conflicts.Resolution
 
getDescription() - Method in class net.imagej.updater.FileObject
 
getDescription() - Method in class net.imagej.updater.UpdateSite
 
getDestination() - Method in interface net.imagej.updater.util.Downloadable
 
getDeveloperActions() - Method in enum net.imagej.updater.FileObject.Status
 
getDigest(String, File, long) - Method in class net.imagej.updater.Checksummer
 
getDigest(String, File) - Static method in class net.imagej.updater.util.UpdaterUtil
 
getDigest() - Static method in class net.imagej.updater.util.UpdaterUtil
 
getFileDependencies(FilesCollection, boolean) - Method in class net.imagej.updater.FileObject
 
getFileFromDigest(String, String) - Method in class net.imagej.updater.FilesCollection
 
getFilename() - Method in class net.imagej.updater.Conflicts.Conflict
 
getFilename() - Method in class net.imagej.updater.FileObject
 
getFilename(boolean) - Method in class net.imagej.updater.FileObject
 
getFilename(String, boolean) - Static method in class net.imagej.updater.FileObject
 
getFilename(long) - Method in class net.imagej.updater.FileObject
Returns the file name for the given date, as per the update site.
getFilename() - Method in class net.imagej.updater.FilesUploader.DbXmlFile
 
getFilename() - Method in interface net.imagej.updater.Uploadable
 
getFilename() - Method in class net.imagej.updater.UploadableFile
 
getFilesCollection() - Method in class net.imagej.updater.FilesUploader
 
getFilesize() - Method in class net.imagej.updater.FilesUploader.DbXmlFile
 
getFilesize() - Method in interface net.imagej.updater.Uploadable
 
getFilesize() - Method in class net.imagej.updater.UploadableFile
 
getFilesize() - Method in interface net.imagej.updater.util.Downloadable
 
getHost() - Method in class net.imagej.updater.UpdateSite
 
getInputStream() - Method in class net.imagej.updater.FilesUploader.DbXmlFile
 
getInputStream() - Method in interface net.imagej.updater.Uploadable
 
getInputStream() - Method in class net.imagej.updater.UploadableFile
 
getInputStream(InputStream, int) - Method in class net.imagej.updater.XMLFileDownloader
 
getInstalledVersions(File, Progress) - Static method in class net.imagej.updater.FilesCollection
Utility method for the Bug Submitter
getInstance() - Static method in class net.imagej.updater.CommandLine
Deprecated.
getInterfaces() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getJarDigest(File) - Static method in class net.imagej.updater.util.UpdaterUtil
 
getJarDigest(File, boolean, boolean) - Static method in class net.imagej.updater.util.UpdaterUtil
 
getJarDigest(File, boolean, boolean, boolean) - Static method in class net.imagej.updater.util.UpdaterUtil
 
getLabel(FilesCollection, Iterable<FileObject>) - Method in class net.imagej.updater.action.InstallOrUpdate
 
getLabel(FilesCollection, Iterable<FileObject>) - Method in class net.imagej.updater.action.KeepAsIs
 
getLabel(FilesCollection, Iterable<FileObject>) - Method in class net.imagej.updater.action.Remove
 
getLabel(FilesCollection, Iterable<FileObject>) - Method in class net.imagej.updater.action.Uninstall
 
getLabel(FilesCollection, Iterable<FileObject>) - Method in class net.imagej.updater.action.Upload
 
getLabel(FilesCollection, Iterable<FileObject>) - Method in interface net.imagej.updater.GroupAction
 
getLastModified(String) - Static method in class net.imagej.updater.UpToDate
 
getLastModified() - Method in class net.imagej.updater.util.Downloader
 
getLastModified(URL) - Static method in class net.imagej.updater.util.UpdaterUtil
 
getLinks() - Method in class net.imagej.updater.FileObject
 
getLocalFilename(boolean) - Method in class net.imagej.updater.FileObject
 
getLog() - Method in class net.imagej.updater.FilesUploader
 
getLogService() - Static method in class net.imagej.updater.util.UpdaterUtil
Get a log service.
getLongUpdateSiteName(String) - Method in class net.imagej.updater.CommandLine
 
getMaintainer() - Method in class net.imagej.updater.UpdateSite
 
getName() - Method in class net.imagej.updater.UpdateSite
 
getNewURL() - Method in class net.imagej.updater.URLChange
 
getNoAction() - Method in enum net.imagej.updater.FileObject.Status
 
getObsoleteDigests(String, File) - Static method in class net.imagej.updater.util.UpdaterUtil
Handle previous methods to calculate the checksums gracefully Earlier, we simply checksummed all the contents in .jar files.
getOutputStream() - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
getOutputStream() - Method in class net.imagej.updater.util.UpdaterUserInterface
 
getOutputStream() - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
getPassword(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
getPassword(String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
getPassword(String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
getPasswordAuthentication() - Method in class net.imagej.updater.CommandLine.ConsoleAuthenticator
 
getPathForClass() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getPermissions() - Method in class net.imagej.updater.FilesUploader.DbXmlFile
 
getPermissions() - Method in interface net.imagej.updater.Uploadable
 
getPermissions() - Method in class net.imagej.updater.UploadableFile
 
getPlatform() - Static method in class net.imagej.updater.util.UpdaterUtil
Deprecated.
Use Platforms.current() instead.
getPlatforms() - Method in class net.imagej.updater.FileObject
 
getPref(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
getPref(String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
getPref(String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
getPrevious() - Method in class net.imagej.updater.FileObject
 
getProtocol() - Method in class net.imagej.updater.FileUploader
 
getProtocol() - Method in interface net.imagej.updater.Uploader
TODO
getProtocol() - Static method in class net.imagej.updater.util.HTTPSUtil
 
getProtocols(Iterable<FileObject>) - Method in class net.imagej.updater.FilesCollection
 
getRank() - Method in class net.imagej.updater.UpdateSite
 
getResolutions() - Method in class net.imagej.updater.Conflicts.Conflict
 
getSeverity() - Method in class net.imagej.updater.Conflicts.Conflict
 
getSiteName() - Method in class net.imagej.updater.FilesUploader
 
getSiteNamesToUpload() - Method in class net.imagej.updater.FilesCollection
 
getSortedEntries(JarFile) - Static method in class net.imagej.updater.Diff
Make an alphabetically-sorted list of files inside a .jar file.
getSourceFile() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getStatus() - Method in class net.imagej.updater.FileObject
 
getString(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
getString(String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
getString(String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
getStringConstant(int) - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getSuperclass() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
getTimestamp() - Method in class net.imagej.updater.AbstractUploader
 
getTimestamp() - Method in class net.imagej.updater.FileObject
 
getTimestamp() - Method in class net.imagej.updater.UpdateSite
 
getTimestamp() - Method in interface net.imagej.updater.Uploader
TODO
getTimestamp(File) - Static method in class net.imagej.updater.util.UpdaterUtil
 
getUpdaterFiles(FilesCollection, CommandService, boolean) - Static method in class net.imagej.updater.Installer
 
getUpdateSite(String) - Method in class net.imagej.updater.DefaultUpdateService
 
getUpdateSite(File) - Method in class net.imagej.updater.DefaultUpdateService
 
getUpdateSite(String) - Method in class net.imagej.updater.FilesCollection
getUpdateSite(String, boolean) - Method in class net.imagej.updater.FilesCollection
 
getUpdateSite(String) - Method in interface net.imagej.updater.UpdateService
Gets the update site with the given name.
getUpdateSite(File) - Method in interface net.imagej.updater.UpdateService
Gets the update site housing the given file.
getUpdateSiteNames() - Method in class net.imagej.updater.FilesCollection
getUpdateSiteNames(boolean) - Method in class net.imagej.updater.FilesCollection
Gets the names of known update sites.
getUpdateSites(boolean) - Method in class net.imagej.updater.FilesCollection
Gets the list of known update sites.
getUploadDirectory() - Method in class net.imagej.updater.FilesUploader
 
getUploadDirectory() - Method in class net.imagej.updater.UpdateSite
 
getUploader(String) - Method in class net.imagej.updater.DefaultUploaderService
 
getUploader(String) - Method in interface net.imagej.updater.UploaderService
TODO.
getUploadHost() - Method in class net.imagej.updater.FilesUploader
 
getUploadProtocol() - Method in class net.imagej.updater.UpdateSite
 
getURL(FileObject) - Method in class net.imagej.updater.FilesCollection
 
getURL() - Method in class net.imagej.updater.UpdateSite
 
getURL() - Method in interface net.imagej.updater.util.Downloadable
 
getUsername(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
getValidActions() - Method in class net.imagej.updater.FilesCollection
 
getValidActions(Iterable<FileObject>) - Method in class net.imagej.updater.FilesCollection
 
getWarnings() - Method in class net.imagej.updater.XMLFileDownloader
 
getWarnings() - Method in class net.imagej.updater.XMLFileReader
 
GroupAction - Interface in net.imagej.updater
A common interface for all actions to be applied to a set of files.
guessPlatform(FileObject) - Method in class net.imagej.updater.Checksummer
 

H

handle(String) - Method in class net.imagej.updater.Checksummer
Handle a single component, adding conflicts if there are multiple versions.
handle(Checksummer.StringAndFile) - Method in class net.imagej.updater.Checksummer
 
handleException(Throwable) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
handleException(Throwable) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
handleException(Throwable) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
handleQueue() - Method in class net.imagej.updater.Checksummer
 
has(FilesCollection.Filter) - Method in class net.imagej.updater.FilesCollection
 
hasChanges() - Method in class net.imagej.updater.FilesCollection
 
hasDependency(String) - Method in class net.imagej.updater.FileObject
 
hasDownloadConflicts() - Method in class net.imagej.updater.Conflicts
 
hasForcableUpdates() - Method in class net.imagej.updater.FilesCollection
 
hashCode() - Method in class net.imagej.updater.Checksummer.StringAndFile
 
hashCode() - Method in class net.imagej.updater.FileObject.Version
 
hashCode() - Method in class net.imagej.updater.UpdateSite
 
hasImageJUserSiteProtocolUpdates(FilesCollection) - Static method in class net.imagej.updater.util.HTTPSUtil
 
hasMetadataChanges() - Method in class net.imagej.updater.FilesCollection
 
hasNext() - Method in class net.imagej.updater.FilesCollection.FilteredIterator
 
hasPreviousVersion(String) - Method in class net.imagej.updater.FileObject
 
hasUpdateSitesChanges() - Method in class net.imagej.updater.FilesCollection
 
hasUpdateSiteURLUpdates(FilesCollection) - Static method in class net.imagej.updater.util.AvailableSites
Checks whether for all update sites of a given FilesCollection there is an updated URL on the remote list of available update sites.
hasUpdateSiteURLUpdates(FilesCollection, Map<String, UpdateSite>) - Static method in class net.imagej.updater.util.AvailableSites
Checks whether for all update sites of a given FilesCollection there is an updated URL on the given list of available sites.
hasUploadableSites() - Method in class net.imagej.updater.FilesCollection
 
hasUploadConflicts() - Method in class net.imagej.updater.Conflicts
 
hasUploader(String) - Method in class net.imagej.updater.DefaultUploaderService
 
hasUploader() - Method in class net.imagej.updater.FilesUploader
 
hasUploader(String) - Method in interface net.imagej.updater.UploaderService
TODO.
hasUploadOrRemove() - Method in class net.imagej.updater.FilesCollection
 
haveNetworkConnection() - Static method in class net.imagej.updater.UpToDate
 
hex - Static variable in class net.imagej.updater.util.UpdaterUtil
 
hexdump(File, File) - Method in class net.imagej.updater.Diff
Make a hex-dump.
history(List<String>) - Method in class net.imagej.updater.CommandLine
 
HTTPSUtil - Class in net.imagej.updater.util
 
HTTPSUtil() - Constructor for class net.imagej.updater.util.HTTPSUtil
 

I

ignoredConflicts - Variable in class net.imagej.updater.FilesCollection
 
ignoreResolution(String, FileObject) - Method in class net.imagej.updater.Conflicts
 
imagejRoot - Variable in class net.imagej.updater.util.Class2JarFilesMap
 
in - Variable in class net.imagej.updater.util.InputStream2OutputStream
 
inferActive(File) - Static method in class net.imagej.updater.util.Platforms
 
info(String, String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
info(String, String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
info(String, String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
initializeAndAddSites(FilesCollection, Logger) - Static method in class net.imagej.updater.util.AvailableSites
As AvailableSites.initializeAndAddSites(FilesCollection) with an optional Logger for reporting errors.
initializeAndAddSites(FilesCollection, LogService) - Static method in class net.imagej.updater.util.AvailableSites
 
initializeAndAddSites(FilesCollection) - Static method in class net.imagej.updater.util.AvailableSites
Initializes the list of update sites, and adds them to the given FilesCollection.
initializeQueue() - Method in class net.imagej.updater.Checksummer
 
initialUpload(String, String, String) - Static method in class net.imagej.updater.FilesUploader
Deprecated.
initialUploader(UploaderService, String, String, String, Progress) - Static method in class net.imagej.updater.FilesUploader
 
InputStream2OutputStream - Class in net.imagej.updater.util
Copies an InputStream into an OutputStream.
InputStream2OutputStream(InputStream, OutputStream) - Constructor for class net.imagej.updater.util.InputStream2OutputStream
 
installed() - Method in class net.imagej.updater.FilesCollection
 
Installer - Class in net.imagej.updater
A class that updates local files from all available update sites.
Installer(FilesCollection, Progress) - Constructor for class net.imagej.updater.Installer
 
InstallOrUpdate - Class in net.imagej.updater.action
The update action.
InstallOrUpdate() - Constructor for class net.imagej.updater.action.InstallOrUpdate
 
installUploader(String, FilesCollection, Progress) - Method in class net.imagej.updater.DefaultUploaderService
 
installUploader(String, FilesCollection, Progress) - Method in interface net.imagej.updater.UploaderService
TODO.
Interface(int) - Constructor for class net.imagej.updater.util.ByteCodeAnalyzer.Interface
 
is(FileObject.Action) - Method in class net.imagej.updater.FilesCollection
 
is(FileObject.Status) - Method in class net.imagej.updater.FilesCollection
 
isActive() - Method in class net.imagej.updater.UpdateSite
 
isActivePlatform(FilesCollection) - Method in class net.imagej.updater.FileObject
 
isActivePlatform(String) - Method in class net.imagej.updater.FilesCollection
 
isApproved() - Method in class net.imagej.updater.URLChange
 
isBatchMode() - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
isBatchMode() - Method in class net.imagej.updater.util.UpdaterUserInterface
 
isBatchMode() - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
isCandidate(String) - Method in class net.imagej.updater.Checksummer
 
isCritical() - Method in class net.imagej.updater.Conflicts.Conflict
 
isDeveloper() - Static method in class net.imagej.updater.UpToDate
 
isError() - Method in class net.imagej.updater.Conflicts.Conflict
 
isForPlatform(String) - Method in class net.imagej.updater.FileObject
 
isGPRActivated(File) - Static method in class net.imagej.updater.util.UpdaterUtil
Determines whether the ImageJ root directory has been moved to an area dictated by macOS's Gatekeeper Path Randomization feature.
isInstallable() - Method in class net.imagej.updater.FileObject
 
isLastModified(long) - Method in class net.imagej.updater.UpdateSite
 
isLauncher(String) - Static method in class net.imagej.updater.util.Platforms
 
isLinux(String) - Static method in class net.imagej.updater.util.Platforms
 
isLocal(URL) - Static method in class net.imagej.updater.Diff
Determine whether a URL refers to a local file.
isLocallyModified() - Method in class net.imagej.updater.FileObject
 
isLocalOnly() - Method in class net.imagej.updater.FileObject
 
isMac(String) - Static method in class net.imagej.updater.util.Platforms
 
isNewerThan(long) - Method in class net.imagej.updater.FileObject
 
isNoAction() - Method in class net.imagej.updater.FilesCollection
 
isObsolete() - Method in class net.imagej.updater.FileObject
 
isOfficial() - Method in class net.imagej.updater.UpdateSite
Gets whether the site is one of those listed on the canonical list of update sites.
isProtectedLocation(File) - Static method in class net.imagej.updater.util.UpdaterUtil
Determines whether the ImageJ root directory is in an area protected by the OS.
isRecommended() - Method in class net.imagej.updater.URLChange
 
isTheUpdaterUpdateable(FilesCollection) - Static method in class net.imagej.updater.Installer
 
isTheUpdaterUpdateable(FilesCollection, CommandService) - Static method in class net.imagej.updater.Installer
 
isUninstallable() - Method in class net.imagej.updater.FileObject
 
isUpdateable() - Method in class net.imagej.updater.FileObject
 
isUpdateable(boolean) - Method in class net.imagej.updater.FileObject
 
isUpdateSite(String) - Method in class net.imagej.updater.FilesCollection
 
isUploadable(FilesCollection) - Method in class net.imagej.updater.FileObject
Deprecated.
isUploadable(FilesCollection, boolean) - Method in class net.imagej.updater.FileObject
Tells whether this file can be uploaded to its update site Note: this does not check whether the file is locally modified.
isUploadable() - Method in class net.imagej.updater.UpdateSite
 
isValid(FilesCollection, FileObject) - Method in class net.imagej.updater.action.InstallOrUpdate
 
isValid(FilesCollection, FileObject) - Method in class net.imagej.updater.action.KeepAsIs
 
isValid(FilesCollection, FileObject) - Method in class net.imagej.updater.action.Remove
Determines whether we can remove (or unshadow) files from a particular update site.
isValid(FilesCollection, FileObject) - Method in class net.imagej.updater.action.Uninstall
 
isValid(FilesCollection, FileObject) - Method in class net.imagej.updater.action.Upload
Determines whether a particular set of files can be uploaded to this update site.
isValid(FileObject.Action) - Method in enum net.imagej.updater.FileObject.Status
 
isValid(FilesCollection, FileObject) - Method in interface net.imagej.updater.GroupAction
 
isWindows(String) - Static method in class net.imagej.updater.util.Platforms
 
item - Variable in class net.imagej.updater.util.StderrProgress
 
itemCount - Variable in class net.imagej.updater.util.Downloader
 
itemDone(Object) - Method in class net.imagej.updater.FilesUploader.VerifyTimestamp
 
itemDone(Object) - Method in class net.imagej.updater.util.AbstractProgressable
 
itemDone(Object) - Method in interface net.imagej.updater.util.Progress
 
itemDone(Object) - Method in class net.imagej.updater.util.StderrProgress
 
itemTotal - Variable in class net.imagej.updater.util.Downloader
 
iterate(Enumeration<T>) - Static method in class net.imagej.updater.util.UpdaterUtil
 
iterator() - Method in class net.imagej.updater.FilesCollection
 
iterator() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 

J

javap(File, String) - Method in class net.imagej.updater.Diff
Run javap on a class file.
javap(File) - Method in class net.imagej.updater.Diff
Run javap on a class file.
join(String, Iterable<T>) - Static method in class net.imagej.updater.util.UpdaterUtil
 

K

KeepAsIs - Class in net.imagej.updater.action
The no-op action.
KeepAsIs() - Constructor for class net.imagej.updater.action.KeepAsIs
 
known() - Static method in class net.imagej.updater.util.Platforms
 

L

label - Variable in class net.imagej.updater.util.StderrProgress
 
lastModified - Variable in class net.imagej.updater.util.Downloader
 
lastShown - Variable in class net.imagej.updater.util.StderrProgress
 
launchers() - Static method in class net.imagej.updater.util.Platforms
 
lineWidth - Variable in class net.imagej.updater.util.StderrProgress
 
list(List<String>, FilesCollection.Filter) - Method in class net.imagej.updater.CommandLine
 
list(List<String>) - Method in class net.imagej.updater.CommandLine
 
listCurrent(List<String>) - Method in class net.imagej.updater.CommandLine
 
listFromSite(List<String>) - Method in class net.imagej.updater.CommandLine
 
listLocalOnly(List<String>) - Method in class net.imagej.updater.CommandLine
 
listModified(List<String>) - Method in class net.imagej.updater.CommandLine
 
listNotUptodate(List<String>) - Method in class net.imagej.updater.CommandLine
 
listShadowed(List<String>) - Method in class net.imagej.updater.CommandLine
 
listUpdateable(List<String>) - Method in class net.imagej.updater.CommandLine
 
listUpdateIssues() - Method in class net.imagej.updater.Conflicts
 
listUpdateSites(Collection<String>) - Method in class net.imagej.updater.CommandLine
 
listUploadIssues() - Method in class net.imagej.updater.Conflicts
 
listUptodate(List<String>) - Method in class net.imagej.updater.CommandLine
 
localChecksum - Variable in class net.imagej.updater.FileObject
 
localFilename - Variable in class net.imagej.updater.FileObject
 
locallyModified(FileObject, FilesCollection) - Method in class net.imagej.updater.Conflicts
 
locallyModified() - Method in class net.imagej.updater.FilesCollection
 
localOnly() - Method in class net.imagej.updater.FilesCollection
 
localTimestamp - Variable in class net.imagej.updater.FileObject
 
log(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
log - Static variable in class net.imagej.updater.CommandLine
 
log - Variable in class net.imagej.updater.FilesCollection
 
log(String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
log - Variable in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
log(String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
login(FilesUploader) - Method in class net.imagej.updater.AbstractUploader
 
login() - Method in class net.imagej.updater.FilesUploader
 
login(FilesUploader) - Method in interface net.imagej.updater.Uploader
TODO
logout() - Method in class net.imagej.updater.AbstractUploader
 
logout() - Method in class net.imagej.updater.FilesUploader
 
logout() - Method in interface net.imagej.updater.Uploader
TODO

M

main(String...) - Static method in class net.imagej.updater.CommandLine
 
main(File, int, String...) - Static method in class net.imagej.updater.CommandLine
 
main(File, int, Progress, String...) - Static method in class net.imagej.updater.CommandLine
 
main(String...) - Static method in class net.imagej.updater.DllFile
 
MAIN_URL - Static variable in class net.imagej.updater.util.UpdaterUtil
 
managedFiles() - Method in class net.imagej.updater.FilesCollection
 
markForUpdate(boolean) - Method in class net.imagej.updater.FilesCollection
 
markRemoved() - Method in class net.imagej.updater.FileObject
Deprecated.
markRemoved(FilesCollection) - Method in class net.imagej.updater.FileObject
 
markUploaded() - Method in class net.imagej.updater.FileObject
 
matches(FileObject) - Method in class net.imagej.updater.CommandLine.FileFilter
 
matches(FileObject) - Method in interface net.imagej.updater.FilesCollection.Filter
 
matches(String, String) - Static method in class net.imagej.updater.util.Platforms
 
matches(String, Collection<String>) - Static method in class net.imagej.updater.util.Platforms
 
matches(Collection<String>, String) - Static method in class net.imagej.updater.util.Platforms
 
merge(FileObject) - Method in class net.imagej.updater.FileObject
 
messageLogged(LogMessage) - Method in class net.imagej.updater.util.StderrLogService
Deprecated.
 
metadataChanged - Variable in class net.imagej.updater.FileObject
 
Method(int) - Constructor for class net.imagej.updater.util.ByteCodeAnalyzer.Method
 
minShowDelay - Variable in class net.imagej.updater.util.StderrProgress
 
moveOutOfTheWay(File) - Static method in class net.imagej.updater.Installer
 
moveUpdatedIntoPlace() - Method in class net.imagej.updater.Installer
 
moveUpdatedIntoPlace(File, File) - Method in class net.imagej.updater.Installer
 

N

needsFeedback(Iterable<Conflicts.Conflict>) - Static method in class net.imagej.updater.Conflicts
Determine whether a list of conflicts requires user feedback.
needUninstall(FileObject, FilesCollection) - Method in class net.imagej.updater.Conflicts
 
needUpload(FileObject, FilesCollection) - Method in class net.imagej.updater.Conflicts
 
net.imagej.updater - package net.imagej.updater
 
net.imagej.updater.action - package net.imagej.updater.action
 
net.imagej.updater.util - package net.imagej.updater.util
 
neverRemind() - Static method in class net.imagej.updater.UpToDate
 
next() - Method in class net.imagej.updater.FilesCollection.FilteredIterator
 
noConnection() - Static method in class net.imagej.updater.util.HTTPSUtil
 
not(FilesCollection.Filter) - Method in class net.imagej.updater.FilesCollection
 
notHidden() - Method in class net.imagej.updater.FilesCollection
 
Notice(String) - Constructor for class net.imagej.updater.Conflicts.Notice
 
now() - Static method in class net.imagej.updater.UpToDate
 

O

offsetOfFirstDiff(File, File) - Static method in class net.imagej.updater.Diff
Determine whether two files' contents differ.
oneOf(FileObject.Action...) - Method in class net.imagej.updater.FilesCollection
 
oneOf(FileObject.Status...) - Method in class net.imagej.updater.FilesCollection
 
onEvent(UIShownEvent) - Method in class net.imagej.updater.DefaultUpdateService
Checks for updates when the ImageJ UI is first shown.
openConnection(URL) - Static method in class net.imagej.updater.util.UpdaterUtil
Open a connection to a URL.
openStream(URL) - Static method in class net.imagej.updater.util.UpdaterUtil
Open a stream to a URL.
openURL(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
openURL(String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
openURL(String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
optionDialog(String, String, Object[], int) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
optionDialog(String, String, Object[], int) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
optionDialog(String, String, Object[], int) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
or(FilesCollection.Filter, FilesCollection.Filter) - Method in class net.imagej.updater.FilesCollection
 
originalUpdateSite - Variable in class net.imagej.updater.FileObject
 
out - Variable in class net.imagej.updater.util.InputStream2OutputStream
 
overriddenUpdateSites - Variable in class net.imagej.updater.FileObject
 
overrides - Variable in class net.imagej.updater.Dependency
 
overridesOtherUpdateSite() - Method in class net.imagej.updater.FileObject
 

P

patchInfoPList(File, String) - Static method in class net.imagej.updater.util.UpdaterUtil
 
pickNewest(List<Checksummer.StringAndFile>) - Static method in class net.imagej.updater.Checksummer
 
platform() - Method in class net.imagej.updater.FilesCollection
 
platformForLauncher(String) - Static method in class net.imagej.updater.util.Platforms
 
Platforms - Class in net.imagej.updater.util
 
POMParser - Class in net.imagej.updater
A helper class to read information from Maven-built .jar files.
POMParser(FileObject) - Constructor for class net.imagej.updater.POMParser
 
prefix(FileObject) - Method in class net.imagej.updater.FilesCollection
 
prefix(String) - Method in class net.imagej.updater.FilesCollection
 
prefixUpdate(String) - Method in class net.imagej.updater.FilesCollection
 
PREFS_USER - Static variable in class net.imagej.updater.util.UpdaterUtil
 
prettyPrintTimestamp(long) - Static method in class net.imagej.updater.util.UpdaterUtil
 
previous - Variable in class net.imagej.updater.FileObject
 
print(String, String) - Method in class net.imagej.updater.util.StderrProgress
 
printJarsForClass(Class2JarFilesMap, String, boolean) - Static method in class net.imagej.updater.util.Class2JarFilesMap
 
progress - Variable in class net.imagej.updater.CommandLine
 
progress - Variable in class net.imagej.updater.util.AbstractProgressable
 
Progress - Interface in net.imagej.updater.util
A progress dialog abstraction.
Progressable - Interface in net.imagej.updater.util
Base interface for serving Progress instances.
PromptUserToUpdate - Class in net.imagej.updater
This plugin prompts the user to launch the updater due to available updates.
PromptUserToUpdate() - Constructor for class net.imagej.updater.PromptUserToUpdate
 
promptYesNo(String, String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
promptYesNo(String, String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
promptYesNo(String, String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
protocolsMissingUploaders(UploaderService, Progress) - Method in class net.imagej.updater.FilesCollection
 
put(String, FileObject) - Method in class net.imagej.updater.FilesCollection
 

Q

queue(String) - Method in class net.imagej.updater.Checksummer
 
queue(String, File) - Method in class net.imagej.updater.Checksummer
 
queueDir(String[], String[]) - Method in class net.imagej.updater.Checksummer
 
queueDir(String, Set<String>) - Method in class net.imagej.updater.Checksummer
 
queueIfExists(String) - Method in class net.imagej.updater.Checksummer
 

R

read() - Method in class net.imagej.updater.FilesCollection
 
read(File) - Method in class net.imagej.updater.FilesCollection
 
read(FileInputStream) - Method in class net.imagej.updater.FilesCollection
 
read(InputStream) - Method in class net.imagej.updater.POMParser
 
read() - Method in class net.imagej.updater.util.SkipHashedLines
 
read(byte[]) - Method in class net.imagej.updater.util.SkipHashedLines
 
read(byte[], int, int) - Method in class net.imagej.updater.util.SkipHashedLines
 
read(String) - Method in class net.imagej.updater.XMLFileReader
 
read(InputStream) - Method in class net.imagej.updater.XMLFileReader
 
read(String, InputStream, long) - Method in class net.imagej.updater.XMLFileReader
 
readCachedChecksums() - Method in class net.imagej.updater.Checksummer
 
readFile(File) - Static method in class net.imagej.updater.util.UpdaterUtil
 
readStreamAsBytes(InputStream) - Static method in class net.imagej.updater.util.UpdaterUtil
 
redirected - Static variable in class net.imagej.updater.util.StderrProgress
 
refreshUpdateSites(List<String>) - Method in class net.imagej.updater.CommandLine
 
reloadCollectionAndChecksum(Progress) - Method in class net.imagej.updater.FilesCollection
 
Remove - Class in net.imagej.updater.action
The remove action.
Remove(String) - Constructor for class net.imagej.updater.action.Remove
 
remove() - Method in class net.imagej.updater.FilesCollection.FilteredIterator
 
remove(Object) - Method in class net.imagej.updater.FilesCollection
 
removeConflict(String) - Method in class net.imagej.updater.Checksummer
 
removeDependency(String) - Method in class net.imagej.updater.FileObject
 
removeFromUpdateSite(String, FilesCollection) - Method in class net.imagej.updater.FileObject
 
removeProgress(Progress) - Method in class net.imagej.updater.util.AbstractProgressable
 
removeProgress(Progress) - Method in interface net.imagej.updater.util.Progressable
 
removeUpdateSite(String) - Method in class net.imagej.updater.FilesCollection
 
removeUploadSite(List<String>) - Method in class net.imagej.updater.CommandLine
 
removeUploadSite(String...) - Method in class net.imagej.updater.CommandLine
 
removeWindow(Frame) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
removeWindow(Frame) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
removeWindow(Frame) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
renameUpdateSite(String, String) - Method in class net.imagej.updater.FilesCollection
 
replaceDependency(FileObject, String, String) - Method in class net.imagej.updater.Conflicts
 
replaceList(String, String...) - Method in class net.imagej.updater.FileObject
 
replaceUpdateSites(List<UpdateSite>) - Method in class net.imagej.updater.FilesCollection
 
reReadUpdateSite(String, Progress) - Method in class net.imagej.updater.FilesCollection
 
Resolution(String) - Constructor for class net.imagej.updater.Conflicts.Resolution
 
resolutions - Variable in class net.imagej.updater.Conflicts.Conflict
 
resolve() - Method in class net.imagej.updater.Conflicts.Resolution
 
revertUnrealChanges(List<String>) - Method in class net.imagej.updater.CommandLine
 
run() - Method in class net.imagej.updater.CheckForUpdates
 
run() - Method in class net.imagej.updater.PromptUserToUpdate
 
run() - Method in class net.imagej.updater.util.InputStream2OutputStream
 

S

savePreferences() - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
savePreferences() - Method in class net.imagej.updater.util.UpdaterUserInterface
 
savePreferences() - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
set(UpdaterUserInterface) - Static method in class net.imagej.updater.util.UpdaterUserInterface
 
setAction(FilesCollection, FileObject) - Method in class net.imagej.updater.action.InstallOrUpdate
 
setAction(FilesCollection, FileObject) - Method in class net.imagej.updater.action.KeepAsIs
 
setAction(FilesCollection, FileObject) - Method in class net.imagej.updater.action.Remove
 
setAction(FilesCollection, FileObject) - Method in class net.imagej.updater.action.Uninstall
 
setAction(FilesCollection, FileObject) - Method in class net.imagej.updater.action.Upload
 
setAction(FilesCollection, FileObject.Action) - Method in class net.imagej.updater.FileObject
 
setAction(FilesCollection, FileObject) - Method in interface net.imagej.updater.GroupAction
 
setActive(boolean) - Method in class net.imagej.updater.UpdateSite
 
setActivePlatforms(String...) - Method in class net.imagej.updater.FilesCollection
 
setApproved(boolean) - Method in class net.imagej.updater.URLChange
 
setAttribute(AttributesImpl, String, long) - Method in class net.imagej.updater.XMLFileWriter
 
setAttribute(AttributesImpl, String, String) - Method in class net.imagej.updater.XMLFileWriter
 
setCount(int, int) - Method in class net.imagej.updater.FilesUploader.VerifyTimestamp
 
setCount(int, int) - Method in class net.imagej.updater.util.AbstractProgressable
 
setCount(int, int) - Method in interface net.imagej.updater.util.Progress
 
setCount(int, int) - Method in class net.imagej.updater.util.StderrProgress
 
setDescription(String) - Method in class net.imagej.updater.UpdateSite
 
setFirstValidAction(FilesCollection, FileObject.Action...) - Method in class net.imagej.updater.FileObject
 
setHost(String) - Method in class net.imagej.updater.UpdateSite
 
setItemCount(int, int) - Method in class net.imagej.updater.FilesUploader.VerifyTimestamp
 
setItemCount(int, int) - Method in class net.imagej.updater.util.AbstractProgressable
 
setItemCount(int, int) - Method in interface net.imagej.updater.util.Progress
 
setItemCount(int, int) - Method in class net.imagej.updater.util.StderrProgress
 
setKeepURL(boolean) - Method in class net.imagej.updater.UpdateSite
 
setLastModified(long) - Method in class net.imagej.updater.UpdateSite
 
setLatestNag() - Static method in class net.imagej.updater.UpToDate
Remember that we just nagged the user about an update.
setLatestNag(long) - Static method in class net.imagej.updater.UpToDate
Remember when we last nagged the user about an update.
setLocalVersion(String, String, long) - Method in class net.imagej.updater.FileObject
 
setMaintainer(String) - Method in class net.imagej.updater.UpdateSite
 
setName(String) - Method in class net.imagej.updater.UpdateSite
 
setNoAction() - Method in class net.imagej.updater.FileObject
 
setOfficial(boolean) - Method in class net.imagej.updater.UpdateSite
Sets the flag indicating whether the site is listed on the canonical list of update sites.
setPref(String, String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
setPref(String, String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
setPref(String, String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
setStatus(FileObject.Status) - Method in class net.imagej.updater.FileObject
 
setTimestamp(long) - Method in class net.imagej.updater.UpdateSite
 
setTitle(String) - Method in class net.imagej.updater.FilesUploader.VerifyTimestamp
 
setTitle(String) - Method in class net.imagej.updater.util.AbstractProgressable
 
setTitle(String) - Method in interface net.imagej.updater.util.Progress
 
setTitle(String) - Method in class net.imagej.updater.util.StderrProgress
 
setUpdateSitesChanged(boolean) - Method in class net.imagej.updater.FilesCollection
 
setUploadDirectory(String) - Method in class net.imagej.updater.UpdateSite
 
setURL(String) - Method in class net.imagej.updater.UpdateSite
 
setUserInterface() - Static method in class net.imagej.updater.CommandLine
 
shouldKeepURL() - Method in class net.imagej.updater.UpdateSite
 
shouldRemindLater() - Static method in class net.imagej.updater.UpToDate
 
show(List<String>) - Method in class net.imagej.updater.CommandLine
 
show(String) - Method in class net.imagej.updater.CommandLine
 
show(FileObject) - Method in class net.imagej.updater.CommandLine
 
showDiff(String, URL, URL, Diff.Mode) - Method in class net.imagej.updater.Diff
Show the differences between remote and local versions of a file.
shownByDefault() - Method in class net.imagej.updater.FilesCollection
 
showPrompt(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
showStatus(String) - Method in class net.imagej.updater.CommandLine.ConsoleUserInterface
 
showStatus(String) - Method in class net.imagej.updater.util.UpdaterUserInterface
 
showStatus(String) - Method in class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
skip - Static variable in class net.imagej.updater.util.FilterManifest
 
skip(long) - Method in class net.imagej.updater.util.SkipHashedLines
 
SkipHashedLines - Class in net.imagej.updater.util
A helper class for the Checksummer.
SkipHashedLines(InputStream) - Constructor for class net.imagej.updater.util.SkipHashedLines
 
skipShow() - Method in class net.imagej.updater.util.StderrProgress
 
sort() - Method in class net.imagej.updater.FilesCollection
 
source - Variable in class net.imagej.updater.UploadableFile
 
SSH_HOST - Static variable in class net.imagej.updater.util.UpdaterUtil
 
stageForUninstall(FilesCollection) - Method in class net.imagej.updater.FileObject
 
stageForUpdate(FilesCollection, boolean) - Method in class net.imagej.updater.FileObject
 
stageForUpload(FilesCollection, String) - Method in class net.imagej.updater.FileObject
 
start() - Method in class net.imagej.updater.Installer
 
start(Downloadable) - Method in class net.imagej.updater.util.Downloader
 
start(Iterable<Downloadable>) - Method in class net.imagej.updater.util.Downloader
 
start() - Method in class net.imagej.updater.XMLFileDownloader
 
start(boolean) - Method in class net.imagej.updater.XMLFileDownloader
 
startDocument() - Method in class net.imagej.updater.POMParser
 
startDocument() - Method in class net.imagej.updater.XMLFileReader
 
startElement(String, String, String, Attributes) - Method in class net.imagej.updater.POMParser
 
startElement(String, String, String, Attributes) - Method in class net.imagej.updater.XMLFileReader
 
startsWith(String) - Method in class net.imagej.updater.FilesCollection
 
startsWith(String...) - Method in class net.imagej.updater.FilesCollection
 
StderrInterface() - Constructor for class net.imagej.updater.util.UpdaterUserInterface.StderrInterface
 
StderrLogService - Class in net.imagej.updater.util
Deprecated.
Use StderrLogService instead.
StderrLogService() - Constructor for class net.imagej.updater.util.StderrLogService
Deprecated.
 
StderrProgress - Class in net.imagej.updater.util
A default implementation of the Progress interface.
StderrProgress() - Constructor for class net.imagej.updater.util.StderrProgress
 
StderrProgress(int) - Constructor for class net.imagej.updater.util.StderrProgress
 
StringAndFile(String, File) - Constructor for class net.imagej.updater.Checksummer.StringAndFile
 
stripPrefix(String, String) - Static method in class net.imagej.updater.util.UpdaterUtil
 
stripSuffix(String, String) - Static method in class net.imagej.updater.util.UpdaterUtil
 
supportsHTTPS() - Static method in class net.imagej.updater.util.HTTPSUtil
 
supportsURLProtocol(String) - Static method in class net.imagej.updater.util.HTTPSUtil
 

T

timestamp - Variable in class net.imagej.updater.AbstractUploader
 
timestamp - Variable in class net.imagej.updater.Checksummer.StringAndFile
 
timestamp - Variable in class net.imagej.updater.Dependency
 
timestamp - Variable in class net.imagej.updater.FileObject.Version
 
timestamp(long) - Static method in class net.imagej.updater.util.UpdaterUtil
 
timestamp(Calendar) - Static method in class net.imagej.updater.util.UpdaterUtil
 
timestamp2millis(long) - Static method in class net.imagej.updater.util.UpdaterUtil
 
timestamp2millis(String) - Static method in class net.imagej.updater.util.UpdaterUtil
 
timestampChanged(FileObject) - Method in class net.imagej.updater.Conflicts
 
timestampObsolete - Variable in class net.imagej.updater.FileObject.Version
 
toByteArray(boolean) - Method in class net.imagej.updater.XMLFileWriter
 
toCamelCase(String) - Static method in class net.imagej.updater.util.UpdaterUtil
CamelCases a String.
toCompressedByteArray(boolean) - Method in class net.imagej.updater.XMLFileWriter
 
toDebug() - Method in class net.imagej.updater.FileObject
 
toHex(byte[]) - Static method in class net.imagej.updater.util.UpdaterUtil
 
toInstall() - Method in class net.imagej.updater.FileObject
 
toInstall() - Method in class net.imagej.updater.FilesCollection
 
toInstallOrUpdate() - Method in class net.imagej.updater.FilesCollection
 
toRemove() - Method in class net.imagej.updater.FilesCollection
 
toString() - Method in class net.imagej.updater.action.InstallOrUpdate
 
toString() - Method in class net.imagej.updater.action.KeepAsIs
 
toString() - Method in class net.imagej.updater.action.Remove
 
toString() - Method in class net.imagej.updater.action.Uninstall
 
toString() - Method in class net.imagej.updater.action.Upload
 
toString() - Method in class net.imagej.updater.Checksummer.StringAndFile
 
toString() - Method in enum net.imagej.updater.Conflicts.Conflict.Severity
 
toString() - Method in class net.imagej.updater.Conflicts.Conflict
 
toString() - Method in class net.imagej.updater.Dependency
 
toString() - Method in enum net.imagej.updater.Diff.Mode
 
toString() - Method in enum net.imagej.updater.FileObject.Action
 
toString() - Method in class net.imagej.updater.FileObject
 
toString() - Method in class net.imagej.updater.FileObject.Version
 
toString() - Method in class net.imagej.updater.FilesCollection
 
toString() - Method in class net.imagej.updater.FilesUploader.DbXmlFile
 
toString() - Method in class net.imagej.updater.UpdateSite
 
toString() - Method in class net.imagej.updater.UploadableFile
 
toString() - Method in class net.imagej.updater.URLChange
 
toString() - Method in class net.imagej.updater.util.ByteCodeAnalyzer.Attribute
 
toString() - Method in class net.imagej.updater.util.ByteCodeAnalyzer.Field
 
toString() - Method in class net.imagej.updater.util.ByteCodeAnalyzer.Interface
 
toString() - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
toString(ByteCodeAnalyzer.Attribute[]) - Method in class net.imagej.updater.util.ByteCodeAnalyzer
 
total - Variable in class net.imagej.updater.AbstractUploader
 
total - Variable in class net.imagej.updater.util.Downloader
 
touch(File) - Static method in class net.imagej.updater.FileObject
 
toUninstall() - Method in class net.imagej.updater.FileObject
 
toUninstall() - Method in class net.imagej.updater.FilesCollection
 
toUpdate() - Method in class net.imagej.updater.FileObject
 
toUpdate() - Method in class net.imagej.updater.FilesCollection
 
toUpload() - Method in class net.imagej.updater.FileObject
 
toUpload() - Method in class net.imagej.updater.FilesCollection
 
toUpload(boolean) - Method in class net.imagej.updater.FilesCollection
 
toUpload(String) - Method in class net.imagej.updater.FilesCollection
 
toUploadOrRemove() - Method in class net.imagej.updater.FilesCollection
 
tryLoadingCollection() - Method in class net.imagej.updater.FilesCollection
 

U

ui - Static variable in class net.imagej.updater.util.UpdaterUserInterface
 
Uninstall - Class in net.imagej.updater.action
The uninstall action.
Uninstall() - Constructor for class net.imagej.updater.action.Uninstall
 
uninstalled() - Method in class net.imagej.updater.FilesCollection
 
update(List<String>) - Method in class net.imagej.updater.CommandLine
 
update(List<String>, boolean) - Method in class net.imagej.updater.CommandLine
 
update(List<String>, boolean, boolean) - Method in class net.imagej.updater.CommandLine
 
UPDATE_DIRECTORY - Static variable in class net.imagej.updater.util.UpdaterUtil
 
updateable(boolean) - Method in class net.imagej.updater.FilesCollection
 
UpdateCanceledException - Exception in net.imagej.updater.util
An exception thrown when an operation of the Updater is canceled.
UpdateCanceledException() - Constructor for exception net.imagej.updater.util.UpdateCanceledException
 
updateDependencies(FileObject) - Method in class net.imagej.updater.FilesCollection
 
updateDigest(InputStream, MessageDigest) - Static method in class net.imagej.updater.util.UpdaterUtil
 
updateFilesize() - Method in class net.imagej.updater.UploadableFile
 
updateFromLocal(List<String>) - Method in class net.imagej.updater.Checksummer
 
updateFromLocal() - Method in class net.imagej.updater.Checksummer
 
UPDATER_JAR_NAME - Static variable in class net.imagej.updater.Installer
 
UpdaterUI - Interface in net.imagej.updater
A placeholder interface for graphical user interfaces for the updater.
UpdaterUIPlugin - Interface in net.imagej.updater
Deprecated.
Use UpdaterUI instead.
UpdaterUserInterface - Class in net.imagej.updater.util
A user interface abstraction.
UpdaterUserInterface() - Constructor for class net.imagej.updater.util.UpdaterUserInterface
 
UpdaterUserInterface.StderrInterface - Class in net.imagej.updater.util
 
UpdaterUtil - Class in net.imagej.updater.util
Utility methods for use with the net.imagej.updater package and subpackages.
UpdateService - Interface in net.imagej.updater
Interface for services that manage ImageJ updates.
updateSite - Variable in class net.imagej.updater.FileObject
 
UpdateSite - Class in net.imagej.updater
Update sites for the updater.
UpdateSite(String, String, String, String, String, String, long) - Constructor for class net.imagej.updater.UpdateSite
 
updateSite() - Method in class net.imagej.updater.URLChange
 
updateTheUpdater(FilesCollection, Progress) - Static method in class net.imagej.updater.Installer
 
updateTheUpdater(FilesCollection, Progress, CommandService) - Static method in class net.imagej.updater.Installer
 
updateUploadTimestamp(long) - Method in class net.imagej.updater.FilesUploader
 
upload(List<Uploadable>, List<String>) - Method in class net.imagej.updater.AbstractUploader
 
Upload - Class in net.imagej.updater.action
The upload action.
Upload(String) - Constructor for class net.imagej.updater.action.Upload
 
upload(List<String>) - Method in class net.imagej.updater.CommandLine
 
upload(Progress) - Method in class net.imagej.updater.FilesUploader
 
upload(List<Uploadable>, List<String>) - Method in class net.imagej.updater.FileUploader
 
upload(List<Uploadable>, List<String>) - Method in interface net.imagej.updater.Uploader
TODO
uploadable() - Method in class net.imagej.updater.FilesCollection
 
uploadable(boolean) - Method in class net.imagej.updater.FilesCollection
Gets the list of uploadable files.
Uploadable - Interface in net.imagej.updater
A container representing one file to upload.
UploadableFile - Class in net.imagej.updater
A class used for uploading local files.
UploadableFile(FilesCollection, FileObject) - Constructor for class net.imagej.updater.UploadableFile
 
UploadableFile(File, String) - Constructor for class net.imagej.updater.UploadableFile
 
UploadableFile(File, String, String) - Constructor for class net.imagej.updater.UploadableFile
 
uploadCompleteSite(List<String>) - Method in class net.imagej.updater.CommandLine
 
uploadDir - Variable in class net.imagej.updater.AbstractUploader
 
Uploader - Interface in net.imagej.updater
Interface for ImageJ upload mechanisms.
UploaderService - Interface in net.imagej.updater
Interface for service that manages available ImageJ upload mechanisms.
upToDate() - Method in class net.imagej.updater.FilesCollection
 
UpToDate - Class in net.imagej.updater
This class helps to determine the status of the current ImageJ installation.
UpToDate() - Constructor for class net.imagej.updater.UpToDate
 
UpToDate.Result - Enum in net.imagej.updater
 
URLChange - Class in net.imagej.updater
Class indicating automated changes to an update site.
usage() - Method in class net.imagej.updater.CommandLine
 
userSiteConvertToHTTP(String) - Static method in class net.imagej.updater.util.HTTPSUtil
 
useSystemProxies() - Static method in class net.imagej.updater.util.UpdaterUtil
 

V

validate(boolean) - Method in class net.imagej.updater.XMLFileWriter
 
validate(InputStream) - Method in class net.imagej.updater.XMLFileWriter
 
valueOf(String) - Static method in enum net.imagej.updater.Conflicts.Conflict.Severity
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum net.imagej.updater.Diff.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum net.imagej.updater.FileObject.Action
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum net.imagej.updater.FileObject.Status
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum net.imagej.updater.UpToDate.Result
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum net.imagej.updater.util.ByteCodeAnalyzer.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum net.imagej.updater.util.FilterManifest.Skip
Returns the enum constant of this type with the specified name.
values() - Static method in enum net.imagej.updater.Conflicts.Conflict.Severity
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum net.imagej.updater.Diff.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum net.imagej.updater.FileObject.Action
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum net.imagej.updater.FileObject.Status
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum net.imagej.updater.UpToDate.Result
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum net.imagej.updater.util.ByteCodeAnalyzer.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum net.imagej.updater.util.FilterManifest.Skip
Returns an array containing the constants of this enum type, in the order they are declared.
verify(Installer.Download) - Method in class net.imagej.updater.Installer
 
verifyTimestamp() - Method in class net.imagej.updater.FilesUploader
 
VerifyTimestamp() - Constructor for class net.imagej.updater.FilesUploader.VerifyTimestamp
 
verifyUnchanged(Uploadable, boolean) - Method in class net.imagej.updater.FilesUploader
 
Version(FileObject.Version) - Constructor for class net.imagej.updater.FileObject.Version
 

W

warning(SAXParseException) - Method in class net.imagej.updater.XMLFileErrorHandler
 
willBeUpToDate() - Method in class net.imagej.updater.FileObject
 
willNotBeInstalled() - Method in class net.imagej.updater.FileObject
 
write() - Method in class net.imagej.updater.FilesCollection
 
write(OutputStream, boolean) - Method in class net.imagej.updater.XMLFileWriter
 
writeCachedChecksums() - Method in class net.imagej.updater.Checksummer
 
writeFile(File, String) - Static method in class net.imagej.updater.util.UpdaterUtil
 
writeSimpleTag(String, String) - Method in class net.imagej.updater.XMLFileWriter
 
writeSimpleTag(String, String, AttributesImpl) - Method in class net.imagej.updater.XMLFileWriter
 
writeSimpleTags(String, Iterable<String>) - Method in class net.imagej.updater.XMLFileWriter
 
writeSingle(boolean, AttributesImpl, FileObject, long) - Method in class net.imagej.updater.XMLFileWriter
 

X

XML_COMPRESSED - Static variable in class net.imagej.updater.util.UpdaterUtil
 
XMLFileDownloader - Class in net.imagej.updater
Directly in charge of downloading and saving start-up files (i.e.: XML file and related).
XMLFileDownloader(FilesCollection) - Constructor for class net.imagej.updater.XMLFileDownloader
 
XMLFileDownloader(FilesCollection, Collection<String>) - Constructor for class net.imagej.updater.XMLFileDownloader
 
XMLFileErrorHandler - Class in net.imagej.updater
Our own error handler for XML validation.
XMLFileErrorHandler() - Constructor for class net.imagej.updater.XMLFileErrorHandler
 
XMLFileReader - Class in net.imagej.updater
The XML File Reader reads a locally-cached index of the available file versions.
XMLFileReader(FilesCollection) - Constructor for class net.imagej.updater.XMLFileReader
 
XMLFileWriter - Class in net.imagej.updater
Writes a db.xml.gz file for local and remote use of the updater.
XMLFileWriter(FilesCollection) - Constructor for class net.imagej.updater.XMLFileWriter
 

Y

yes() - Method in class net.imagej.updater.FilesCollection
 
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