net.imagej.legacy.convert.roi.polyline

Class IrregularPolylineRoiWrapper

java.lang.Object

net.imagej.legacy.convert.roi.polyline.IrregularPolylineRoiWrapper

All Implemented Interfaces:

Predicate<net.imglib2.RealLocalizable>, IJRealRoiWrapper<ij.gui.PolygonRoi>, IJRoiWrapper<ij.gui.PolygonRoi,net.imglib2.RealLocalizable>, net.imglib2.EuclideanSpace, net.imglib2.RealInterval, net.imglib2.roi.MaskPredicate<net.imglib2.RealLocalizable>, net.imglib2.roi.RealMask, net.imglib2.roi.RealMaskRealInterval

public class IrregularPolylineRoiWrapper
extends Object
implements IJRealRoiWrapper<ij.gui.PolygonRoi>

Wraps a PolygonRoi of type Roi.POLYLINE or Roi.FREELINE with a non zero width as a RealMaskRealInterval. This can also be used to wrap Roi.POLYLINE which have been spline fitted.

This is only intended to wrap existing ImageJ 1.x Rois, not to create ImgLib2 Rois backed by ImageJ 1.x Rois.

Author:

Alison Walter

Constructor Summary

Constructors

Constructor and Description
IrregularPolylineRoiWrapper(ij.gui.PolygonRoi roi) Creates a RealMaskRealInterval which wraps the given Roi.

Method Summary

Modifier and Type	Method and Description
net.imglib2.roi.BoundaryType	boundaryType()
ij.gui.PolygonRoi	getRoi() Returns the backing ImageJ 1.x Roi.
double	realMax(int d)
double	realMin(int d)
boolean	test(net.imglib2.RealLocalizable t) This includes some additional points near the vertices of the polyline.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.imagej.legacy.convert.roi.IJRoiWrapper

numDimensions

Methods inherited from interface net.imglib2.roi.RealMaskRealInterval

and, isEmpty, minus, or, realMax, realMax, realMin, realMin, transform, xor

Methods inherited from interface net.imglib2.roi.RealMask

negate, or, transform, xor

Methods inherited from interface net.imglib2.roi.MaskPredicate

equals, isAll, knownConstant, maskType

Methods inherited from interface java.util.function.Predicate

isEqual

Methods inherited from interface net.imglib2.RealInterval

maxAsDoubleArray, maxAsRealPoint, minAsDoubleArray, minAsRealPoint

Constructor Detail

IrregularPolylineRoiWrapper

public IrregularPolylineRoiWrapper(ij.gui.PolygonRoi roi)

Creates a RealMaskRealInterval which wraps the given Roi.

Parameters:

roi - the Roi to be wrapped

Method Detail

test

public boolean test(net.imglib2.RealLocalizable t)

This includes some additional points near the vertices of the polyline.

Specified by:

test in interface Predicate<net.imglib2.RealLocalizable>

boundaryType

public net.imglib2.roi.BoundaryType boundaryType()

Specified by:

boundaryType in interface net.imglib2.roi.MaskPredicate<net.imglib2.RealLocalizable>

getRoi

public ij.gui.PolygonRoi getRoi()

Description copied from interface: IJRoiWrapper

Returns the backing ImageJ 1.x Roi.

Specified by:

getRoi in interface IJRoiWrapper<ij.gui.PolygonRoi,net.imglib2.RealLocalizable>

Returns:

ImageJ 1.x Roi

realMin

public double realMin(int d)

Specified by:

realMin in interface net.imglib2.RealInterval

realMax

public double realMax(int d)

Specified by:

realMax in interface net.imglib2.RealInterval