| Package | Description |
|---|---|
| net.imagej | |
| net.imagej.convert | |
| net.imagej.display | |
| net.imagej.event | |
| net.imagej.lut | |
| net.imagej.roi | |
| net.imagej.table | |
| net.imagej.ui.viewer.image |
| Modifier and Type | Class and Description |
|---|---|
class |
DefaultDataset
Default implementation of
Dataset. |
| Modifier and Type | Method and Description |
|---|---|
Dataset |
Dataset.copy() |
Dataset |
DefaultDataset.copy() |
Dataset |
DatasetFactory.create(Dimensions dimensions) |
Dataset |
DatasetFactory.create(Dimensions dim,
RealType<?> type)
Deprecated.
|
<T extends RealType<T>> |
DefaultDatasetService.create(ImgFactory<T> factory,
long[] dims,
String name,
AxisType[] axes) |
<T extends RealType<T>> |
DatasetService.create(ImgFactory<T> factory,
long[] dims,
String name,
AxisType[] axes)
Creates a new dataset using the provided
ImgFactory. |
<T extends RealType<T>> |
DefaultDatasetService.create(ImgFactory<T> factory,
T type,
long[] dims,
String name,
AxisType[] axes)
Deprecated.
|
<T extends RealType<T>> |
DatasetService.create(ImgFactory<T> factory,
T type,
long[] dims,
String name,
AxisType[] axes)
Deprecated.
|
<T extends Type<T>> |
DefaultDatasetService.create(ImgPlus<T> imgPlus) |
<T extends Type<T>> |
DatasetService.create(ImgPlus<T> imgPlus)
Creates a new dataset using the provided
ImgPlus. |
Dataset |
DatasetFactory.create(int[] dimensions) |
Dataset |
DatasetFactory.create(int[] dim,
RealType<?> type)
Deprecated.
|
Dataset |
DatasetFactory.create(long... dimensions) |
Dataset |
DatasetFactory.create(long[] dim,
RealType<?> type)
Deprecated.
|
Dataset |
DefaultDatasetService.create(long[] dims,
String name,
AxisType[] axes,
int bitsPerPixel,
boolean signed,
boolean floating) |
Dataset |
DatasetService.create(long[] dims,
String name,
AxisType[] axes,
int bitsPerPixel,
boolean signed,
boolean floating)
Creates a new dataset.
|
Dataset |
DefaultDatasetService.create(long[] dims,
String name,
AxisType[] axes,
int bitsPerPixel,
boolean signed,
boolean floating,
boolean virtual) |
Dataset |
DatasetService.create(long[] dims,
String name,
AxisType[] axes,
int bitsPerPixel,
boolean signed,
boolean floating,
boolean virtual)
Creates a new dataset.
|
<T extends Type<T>> |
DefaultDatasetService.create(RandomAccessibleInterval<T> rai) |
<T extends Type<T>> |
DatasetService.create(RandomAccessibleInterval<T> rai)
Creates a new dataset using the provided
RandomAccessibleInterval. |
Dataset |
DatasetFactory.create(Supplier<RealType<?>> typeSupplier,
Dimensions dim)
Deprecated.
|
Dataset |
DatasetFactory.create(Supplier<RealType<?>> typeSupplier,
int[] dim)
Deprecated.
|
Dataset |
DatasetFactory.create(Supplier<RealType<?>> typeSupplier,
long... dim)
Deprecated.
|
<T extends RealType<T> & NativeType<T>> |
DefaultDatasetService.create(T type,
long[] dims,
String name,
AxisType[] axes) |
<T extends RealType<T> & NativeType<T>> |
DatasetService.create(T type,
long[] dims,
String name,
AxisType[] axes)
Creates a new dataset.
|
<T extends RealType<T> & NativeType<T>> |
DefaultDatasetService.create(T type,
long[] dims,
String name,
AxisType[] axes,
boolean virtual) |
<T extends RealType<T> & NativeType<T>> |
DatasetService.create(T type,
long[] dims,
String name,
AxisType[] axes,
boolean virtual)
Creates a new dataset.
|
Dataset |
Dataset.duplicate()
Creates a copy of the dataset.
|
Dataset |
DefaultDataset.duplicate() |
Dataset |
Dataset.duplicateBlank()
Creates a copy of the dataset, but without copying any pixel values.
|
Dataset |
DefaultDataset.duplicateBlank() |
Dataset |
DrawingTool.getDataset()
Return the Dataset associated with this DrawingTool.
|
Dataset |
ImageGrabber.grab(DatasetView view,
String outputName)
Creates a merged color
Dataset from a DatasetView. |
Dataset |
DefaultDatasetService.open(String source)
Deprecated.
Use io.scif.services.DatasetIOService#open instead.
|
Dataset |
DatasetService.open(String source)
Deprecated.
Use io.scif.services.DatasetIOService#open instead.
|
Dataset |
DefaultDatasetService.open(String source,
Object config)
Deprecated.
Use io.scif.services.DatasetIOService#open instead.
|
Dataset |
DatasetService.open(String source,
Object config)
Deprecated.
Use io.scif.services.DatasetIOService#open instead.
|
| Modifier and Type | Method and Description |
|---|---|
List<Dataset> |
DefaultDatasetService.getDatasets() |
List<Dataset> |
DatasetService.getDatasets()
Gets a list of all
Datasets. |
List<Dataset> |
DefaultDatasetService.getDatasets(ImageDisplay display) |
List<Dataset> |
DatasetService.getDatasets(ImageDisplay display)
Gets a list of
Datasets linked to the given ImageDisplay. |
| Modifier and Type | Method and Description |
|---|---|
void |
Dataset.copyDataFrom(Dataset other)
Changes a Dataset's internal data and metadata to match that from a given
Dataset.
|
void |
DefaultDataset.copyDataFrom(Dataset other) |
void |
Dataset.copyInto(Dataset target)
Copies the dataset's pixels into the given target dataset.
|
void |
DefaultDataset.copyInto(Dataset target) |
void |
DefaultDatasetService.revert(Dataset dataset)
Deprecated.
Use io.scif.services.DatasetIOService#revert instead.
|
void |
DatasetService.revert(Dataset dataset)
Deprecated.
Use io.scif.services.DatasetIOService#revert instead.
|
Object |
DefaultDatasetService.save(Dataset dataset,
String destination)
Deprecated.
Use io.scif.services.DatasetIOService#save instead.
|
Object |
DatasetService.save(Dataset dataset,
String destination)
Deprecated.
Use io.scif.services.DatasetIOService#save instead.
|
Object |
DefaultDatasetService.save(Dataset dataset,
String destination,
Object config)
Deprecated.
Use io.scif.services.DatasetIOService#save instead.
|
Object |
DatasetService.save(Dataset dataset,
String destination,
Object config)
Deprecated.
Use io.scif.services.DatasetIOService#save instead.
|
| Constructor and Description |
|---|
DatasetFactory(RealType<?> type,
Dataset dataset,
net.imagej.DatasetImgFactory.ImgCreator creator,
Function<Img<?>,Dataset> wrapper) |
DatasetImgFactory(T type,
Dataset dataset,
net.imagej.DatasetImgFactory.ImgCreator creator) |
DrawingTool(Dataset ds,
RenderingService service)
Creates a DrawingTool to modify a specified Dataset.
|
| Constructor and Description |
|---|
DatasetFactory(RealType<?> type,
Dataset dataset,
net.imagej.DatasetImgFactory.ImgCreator creator,
Function<Img<?>,Dataset> wrapper) |
| Modifier and Type | Method and Description |
|---|---|
protected Dataset |
ImageConverters.ImgToDatasetConverter.convert(Img src) |
protected Dataset |
ImageConverters.ImgPlusToDatasetConverter.convert(ImgPlus src) |
protected Dataset |
ImageConverters.RAIToDatasetConverter.convert(RandomAccessibleInterval src) |
| Modifier and Type | Method and Description |
|---|---|
Dataset |
ScreenCaptureService.captureScreen() |
Dataset |
DummyScreenCaptureService.captureScreen()
No-op implementation.
|
Dataset |
ScreenCaptureService.captureScreenRegion(int x,
int y,
int width,
int height) |
Dataset |
DummyScreenCaptureService.captureScreenRegion(int x,
int y,
int width,
int height)
No-op implementation.
|
default Dataset |
ImageDisplayService.getActiveDataset()
Gets the active
Dataset, if any, of the currently active
ImageDisplay. |
default Dataset |
ImageDisplayService.getActiveDataset(ImageDisplay display)
Gets the active
Dataset, if any, of the given ImageDisplay. |
Dataset |
DefaultDatasetView.getData() |
Dataset |
DatasetView.getData() |
| Modifier and Type | Method and Description |
|---|---|
default DatasetView |
ImageDisplayService.createDatasetView(Dataset dataset)
Creates a new
DatasetView wrapping the given dataset. |
void |
OverlayService.drawOverlay(Overlay o,
Dataset ds,
Position position,
ChannelCollection channelData)
Draws the outline of a given overlay in a dataset using the set of channel
information provided.
|
void |
DefaultOverlayService.drawOverlay(Overlay o,
Dataset ds,
Position position,
ChannelCollection channels) |
void |
OverlayService.fillOverlay(Overlay o,
Dataset ds,
Position position,
ChannelCollection channelData)
Draws and fills the outline of a given overlay in a dataset using the set
of channel information provided.
|
void |
DefaultOverlayService.fillOverlay(Overlay o,
Dataset ds,
Position position,
ChannelCollection channels) |
| Modifier and Type | Method and Description |
|---|---|
Dataset |
DatasetUpdatedEvent.getObject() |
Dataset |
DatasetRestructuredEvent.getObject() |
Dataset |
DatasetCreatedEvent.getObject() |
Dataset |
DatasetDeletedEvent.getObject() |
| Constructor and Description |
|---|
DatasetCreatedEvent(Dataset dataset) |
DatasetDeletedEvent(Dataset dataset) |
DatasetRestructuredEvent(Dataset dataset) |
DatasetRGBChangedEvent(Dataset dataset) |
DatasetTypeChangedEvent(Dataset dataset) |
DatasetUpdatedEvent(Dataset dataset,
boolean metadataOnly) |
| Modifier and Type | Method and Description |
|---|---|
Dataset |
DefaultLUTService.createDataset(String title,
ColorTable colorTable) |
Dataset |
LUTService.createDataset(String title,
ColorTable colorTable)
Creates a new dataset showing the given
ColorTable as a ramp. |
| Modifier and Type | Method and Description |
|---|---|
default void |
ROIService.clear(Dataset img)
Clears all
MaskPredicates associated with the given Dataset |
default ROITree |
ROIService.getROIs(Dataset img)
|
default ImgLabeling<?,?> |
ROIService.toImgLabeling(Dataset dataset)
Get the ROIs of a
Dataset as ImgLabeling |
| Modifier and Type | Method and Description |
|---|---|
default void |
TableService.add(Table<?,?> table,
Dataset img)
|
default void |
TableService.clear(Dataset img)
|
List<Table<?,?>> |
TableService.getTables(Dataset img)
|
List<Table<?,?>> |
DefaultTableService.getTables(Dataset img) |
| Modifier and Type | Method and Description |
|---|---|
Dataset |
ImageDisplayViewer.capture() |
protected Dataset |
AbstractImageDisplayViewer.getDataset(DataView view) |
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