inra.ijpb.plugins

Class GeodesicDiameterPlugin

java.lang.Object

inra.ijpb.plugins.GeodesicDiameterPlugin

All Implemented Interfaces:

ij.plugin.PlugIn

public class GeodesicDiameterPlugin
extends Object
implements ij.plugin.PlugIn

Plugin for computing geodesic distances of labeled particles using chamfer weights.

Author:

dlegland

Constructor Summary

Constructors

Constructor and Description
GeodesicDiameterPlugin()

Method Summary

Modifier and Type	Method and Description
void	createPathRois(ij.ImagePlus target, Map<Integer,GeodesicDiameter.Result> geodDiams) Adds the specified paths to the list of ROI of the image plus.
void	drawPaths(ij.ImagePlus target, Map<Integer,GeodesicDiameter.Result> geodDiams) Displays the geodesic paths onto the given image.
void	run(String arg0)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GeodesicDiameterPlugin

public GeodesicDiameterPlugin()

Method Detail

run

public void run(String arg0)

Specified by:

run in interface ij.plugin.PlugIn

drawPaths

public void drawPaths(ij.ImagePlus target,
                      Map<Integer,GeodesicDiameter.Result> geodDiams)

Displays the geodesic paths onto the given image.

Parameters:

target - target image

geodDiams - the diameters to draw

createPathRois

public void createPathRois(ij.ImagePlus target,
                           Map<Integer,GeodesicDiameter.Result> geodDiams)

Adds the specified paths to the list of ROI of the image plus.

Parameters:

target - The ImagePlus that will be associated with ROIS

geodDiams - the list of paths