inra.ijpb.color

Class BinaryOverlay

java.lang.Object

inra.ijpb.algo.AlgoStub

inra.ijpb.color.BinaryOverlay

All Implemented Interfaces:

Algo

public class BinaryOverlay
extends AlgoStub

Computes overlay of a binary image mask onto a grayscale or color image, using the specified color. Both images must have the same size.

Author:

dlegland

Constructor Summary

Constructors

Constructor and Description
BinaryOverlay() Empty constructor.

Method Summary

Modifier and Type	Method and Description
ij.ImagePlus	process(ij.ImagePlus imagePlus, ij.ImagePlus maskPlus, Color color) Applies an overlay of a binary image mask onto a grayscale or color image, using the specified color.
ij.process.ImageProcessor	process(ij.process.ImageProcessor refImage, ij.process.ImageProcessor mask, Color color) Applies an overlay of a binary image mask onto a grayscale or color image, using the specified color.
ij.ImageStack	process(ij.ImageStack refImage, ij.ImageStack mask, Color color) Applies an overlay of a binary image mask onto a grayscale or color image, using the specified color.

Methods inherited from class inra.ijpb.algo.AlgoStub

addAlgoListener, fireProgressChanged, fireProgressChanged, fireStatusChanged, fireStatusChanged, removeAlgoListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BinaryOverlay

public BinaryOverlay()

Empty constructor.

Method Detail

process

public ij.ImagePlus process(ij.ImagePlus imagePlus,
                            ij.ImagePlus maskPlus,
                            Color color)

Applies an overlay of a binary image mask onto a grayscale or color image, using the specified color. Both images must have the same size.

Parameters:

imagePlus - the original 2D or 3D image used as background

maskPlus - the binary 2D or 3D mask image

color - the color used to display overlay

Returns:

a new ImagePlus instance containing a 2D or 3D color image

process

public ij.process.ImageProcessor process(ij.process.ImageProcessor refImage,
                                         ij.process.ImageProcessor mask,
                                         Color color)

Applies an overlay of a binary image mask onto a grayscale or color image, using the specified color. Both images must have the same size.

Parameters:

refImage - the original image used as background

mask - the binary mask image

color - the color used to display overlay

Returns:

a new ImagePlus instance containing a 2D color image

process

public ij.ImageStack process(ij.ImageStack refImage,
                             ij.ImageStack mask,
                             Color color)

Applies an overlay of a binary image mask onto a grayscale or color image, using the specified color. Both images must have the same size.

Parameters:

refImage - the original 2D or 3D image used as background

mask - the binary 2D or 3D mask image

color - the color used to display overlay

Returns:

a new ImageStack containing a 3D color image