inra.ijpb.binary.distmap

Class DistanceTransform3D4WeightsShort

java.lang.Object

inra.ijpb.algo.AlgoStub

inra.ijpb.binary.distmap.DistanceTransform3D4WeightsShort

All Implemented Interfaces:

Algo, DistanceTransform3D

Deprecated.

replaced by ChamferDistanceTransform3DShort (since 1.5.0)

@Deprecated
public class DistanceTransform3D4WeightsShort
extends AlgoStub
implements DistanceTransform3D

Computes Chamfer distances in a 3x3x3 neighborhood and storing result in 16-bits image. In practice, computations are done with integers, but result is stored in a 3D short image, thus requiring less memory than floating point.

Author:

David Legland

Constructor Summary

Constructors

Constructor and Description
DistanceTransform3D4WeightsShort(ChamferWeights3D weights) Deprecated. Default constructor that specifies the chamfer weights.
DistanceTransform3D4WeightsShort(ChamferWeights3D weights, boolean normalize) Deprecated. Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3D4WeightsShort(short[] weights) Deprecated. Default constructor that specifies the chamfer weights.
DistanceTransform3D4WeightsShort(short[] weights, boolean normalize) Deprecated. Constructor specifying the chamfer weights and the optional normalization.

Method Summary

Modifier and Type	Method and Description
ij.ImageStack	distanceMap(ij.ImageStack image) Deprecated. Computes the distance map from a 3D binary image.

Methods inherited from class inra.ijpb.algo.AlgoStub

addAlgoListener, fireProgressChanged, fireProgressChanged, fireStatusChanged, fireStatusChanged, removeAlgoListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface inra.ijpb.algo.Algo

addAlgoListener, removeAlgoListener

Constructor Detail

DistanceTransform3D4WeightsShort

public DistanceTransform3D4WeightsShort(ChamferWeights3D weights)

Deprecated.

Default constructor that specifies the chamfer weights.

Parameters:

weights - an array of two weights for orthogonal and diagonal directions

DistanceTransform3D4WeightsShort

public DistanceTransform3D4WeightsShort(short[] weights)

Deprecated.

Default constructor that specifies the chamfer weights.

Parameters:

weights - an array of two weights for orthogonal and diagonal directions

DistanceTransform3D4WeightsShort

public DistanceTransform3D4WeightsShort(ChamferWeights3D weights,
                                        boolean normalize)

Deprecated.

Constructor specifying the chamfer weights and the optional normalization.

Parameters:

weights - an array of two weights for orthogonal and diagonal directions

normalize - flag indicating whether the final distance map should be normalized by the first weight

DistanceTransform3D4WeightsShort

public DistanceTransform3D4WeightsShort(short[] weights,
                                        boolean normalize)

Deprecated.

Constructor specifying the chamfer weights and the optional normalization.

Parameters:

weights - an array of two weights for orthogonal and diagonal directions

normalize - flag indicating whether the final distance map should be normalized by the first weight

Method Detail

distanceMap

public ij.ImageStack distanceMap(ij.ImageStack image)

Deprecated.

Computes the distance map from a 3D binary image. Distance is computed for each foreground (white) pixel, as the chamfer distance to the nearest background (black) pixel.

Specified by:

distanceMap in interface DistanceTransform3D

Parameters:

image - a 3D binary image with white pixels (255) as foreground

Returns:

a new 3D image containing:

• 0 for each background pixel
• the distance to the nearest background pixel otherwise