CurveRenderer (LOCI Javadocs 0-SNAPSHOT API)

java.lang.Object
- loci.slim.fit.CurveRenderer

All Implemented Interfaces:

Runnable, ICurveRenderer

Direct Known Subclasses:

BurnInRenderer
```
public abstract class CurveRenderer
extends Object
implements ICurveRenderer
```
Base class for curve renderer implementations.

Author:

Eric Kjellman

Field Summary

Fields
Modifier and Type	Field and Description
`protected boolean`	`alive`
`protected int`	`currentIterations`
`protected int`	`currentX`
`protected int`	`currentY`
`protected int`	`currProgress`
`protected CurveCollection`	`curveData`
`protected int`	`maxIterations`
`protected int`	`maxProgress`
`protected double`	`maxRCSE`
`protected int`	`numCols`
`protected int`	`numExponentials`
`protected int`	`numRows`
`protected int`	`subsampleLevel`
`protected int`	`totalIterations`

Constructor Summary

Constructors
Constructor and Description

CurveRenderer(CurveCollection cc)

Constructors
Constructor and Description
`CurveRenderer(CurveCollection cc)`

Method Summary

All Methods Instance Methods Abstract Methods Concrete Methods
Modifier and Type	Method and Description
`int`	`getCurrentIterations()`
`int`	`getCurrentProgress()`
`int`	`getCurrentX()`
`int`	`getCurrentY()`
`CurveCollection`	`getCurveCollection()`
`boolean[][]`	`getFixed()`
`abstract double[][]`	`getImage()`
`abstract int`	`getImageX()`
`abstract int`	`getImageY()`
`abstract boolean[][]`	`getMask()`
`int`	`getMaxIterations()`
`int`	`getMaxProgress()`
`double`	`getMaxRCSE()`
`int`	`getSubsampleLevel()`
`int`	`getTotalIterations()`
`abstract double`	`getTotalRCSE()`
`abstract double`	`getWorstRCSE()`
`abstract void`	`run()`
`void`	`setComponentCount(int numExp)`
`void`	`setFixed(boolean[][] fixed)`
`abstract void`	`setMask(boolean[][] mask)`
`void`	`setMaxIterations(int mi)`
`void`	`setMaxRCSE(double mr)`
`void`	`stop()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - alive
```
protected boolean alive
```
  - maxIterations
```
protected int maxIterations
```
  - maxRCSE
```
protected double maxRCSE
```
  - totalIterations
```
protected int totalIterations
```
  - currentIterations
```
protected int currentIterations
```
  - currentX
```
protected int currentX
```
  - currentY
```
protected int currentY
```
  - subsampleLevel
```
protected int subsampleLevel
```
  - currProgress
```
protected int currProgress
```
  - maxProgress
```
protected int maxProgress
```
  - curveData
```
protected CurveCollection curveData
```
  - numRows
```
protected int numRows
```
  - numCols
```
protected int numCols
```
  - numExponentials
```
protected int numExponentials
```
- Constructor Detail
  - CurveRenderer
```
public CurveRenderer(CurveCollection cc)
```
- Method Detail
  - getCurveCollection
```
public CurveCollection getCurveCollection()
```
    Specified by:
    
    getCurveCollection in interface ICurveRenderer
  - run
```
public abstract void run()
```
    Specified by:
    
    run in interface Runnable
    
    Specified by:
    
    run in interface ICurveRenderer
  - stop
```
public void stop()
```
    Specified by:
    
    stop in interface ICurveRenderer
  - getCurrentIterations
```
public int getCurrentIterations()
```
    Specified by:
    
    getCurrentIterations in interface ICurveRenderer
  - getTotalIterations
```
public int getTotalIterations()
```
    Specified by:
    
    getTotalIterations in interface ICurveRenderer
  - getCurrentX
```
public int getCurrentX()
```
    Specified by:
    
    getCurrentX in interface ICurveRenderer
  - getCurrentY
```
public int getCurrentY()
```
    Specified by:
    
    getCurrentY in interface ICurveRenderer
  - getSubsampleLevel
```
public int getSubsampleLevel()
```
    Specified by:
    
    getSubsampleLevel in interface ICurveRenderer
  - getCurrentProgress
```
public int getCurrentProgress()
```
    Specified by:
    
    getCurrentProgress in interface ICurveRenderer
  - getMaxProgress
```
public int getMaxProgress()
```
    Specified by:
    
    getMaxProgress in interface ICurveRenderer
  - setMaxIterations
```
public void setMaxIterations(int mi)
```
    Specified by:
    
    setMaxIterations in interface ICurveRenderer
  - setMaxRCSE
```
public void setMaxRCSE(double mr)
```
    Specified by:
    
    setMaxRCSE in interface ICurveRenderer
  - getMaxIterations
```
public int getMaxIterations()
```
    Specified by:
    
    getMaxIterations in interface ICurveRenderer
  - getMaxRCSE
```
public double getMaxRCSE()
```
    Specified by:
    
    getMaxRCSE in interface ICurveRenderer
  - getImage
```
public abstract double[][] getImage()
```
    Specified by:
    
    getImage in interface ICurveRenderer
  - setComponentCount
```
public void setComponentCount(int numExp)
```
    Specified by:
    
    setComponentCount in interface ICurveRenderer
  - setFixed
```
public void setFixed(boolean[][] fixed)
```
    Specified by:
    
    setFixed in interface ICurveRenderer
  - getFixed
```
public boolean[][] getFixed()
```
    Specified by:
    
    getFixed in interface ICurveRenderer
  - setMask
```
public abstract void setMask(boolean[][] mask)
```
    Specified by:
    
    setMask in interface ICurveRenderer
  - getMask
```
public abstract boolean[][] getMask()
```
    Specified by:
    
    getMask in interface ICurveRenderer
  - getImageX
```
public abstract int getImageX()
```
    Specified by:
    
    getImageX in interface ICurveRenderer
  - getImageY
```
public abstract int getImageY()
```
    Specified by:
    
    getImageY in interface ICurveRenderer
  - getTotalRCSE
```
public abstract double getTotalRCSE()
```
    Specified by:
    
    getTotalRCSE in interface ICurveRenderer
  - getWorstRCSE
```
public abstract double getWorstRCSE()
```
    Specified by:
    
    getWorstRCSE in interface ICurveRenderer

Class CurveRenderer

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

alive

maxIterations

maxRCSE

totalIterations

currentIterations

currentX

currentY

subsampleLevel

currProgress

maxProgress

curveData

numRows

numCols

numExponentials

Constructor Detail

CurveRenderer

Method Detail

getCurveCollection

run

stop

getCurrentIterations

getTotalIterations

getCurrentX

getCurrentY

getSubsampleLevel

getCurrentProgress

getMaxProgress

setMaxIterations

setMaxRCSE

getMaxIterations

getMaxRCSE

getImage

setComponentCount

setFixed

getFixed

setMask

getMask

getImageX

getImageY

getTotalRCSE

getWorstRCSE