Uses of Interface net.imglib2.algorithm.neighborhood.Shape (ImgLib2 Javadocs 0-SNAPSHOT API)

Packages that use Shape
Package	Description
net.imglib2.algorithm.fill
net.imglib2.algorithm.labeling
net.imglib2.algorithm.localextrema
net.imglib2.algorithm.morphology
net.imglib2.algorithm.neighborhood

Uses of Shape in net.imglib2.algorithm.fill

Methods in net.imglib2.algorithm.fill with parameters of type Shape
Modifier and Type	Method and Description
`static <T,U> void`	FloodFill.`fill(RandomAccessible<T> source, RandomAccessible<U> target, Localizable seed, Shape shape, BiPredicate<T,U> filter, Consumer<U> writer)` Iterative n-dimensional flood fill for arbitrary neighborhoods: Starting at seed location, write fillLabel into target at current location and continue for each pixel in neighborhood defined by shape if neighborhood pixel is in the same connected component and fillLabel has not been written into that location yet.
`static <T,U extends Type<U>> void`	FloodFill.`fill(RandomAccessible<T> source, RandomAccessible<U> target, Localizable seed, T seedLabel, U fillLabel, Shape shape, Filter<Pair<T,U>,Pair<T,U>> filter)` Deprecated.
`static <T,U> void`	FloodFill.`fill(RandomAccessible<T> source, RandomAccessible<U> target, Localizable seed, T seedLabel, U fillLabel, Shape shape, Filter<Pair<T,U>,Pair<T,U>> filter, Writer<U> writer)` Deprecated.
`static <T extends Type<T>,U extends Type<U>> void`	FloodFill.`fill(RandomAccessible<T> source, RandomAccessible<U> target, Localizable seed, U fillLabel, Shape shape)` Iterative n-dimensional flood fill for arbitrary neighborhoods: Starting at seed location, write fillLabel into target at current location and continue for each pixel in neighborhood defined by shape if neighborhood pixel is in the same connected component and fillLabel has not been written into that location yet.
`static <T,U extends Type<U>> void`	FloodFill.`fill(RandomAccessible<T> source, RandomAccessible<U> target, Localizable seed, U fillLabel, Shape shape, BiPredicate<T,U> filter)` Iterative n-dimensional flood fill for arbitrary neighborhoods: Starting at seed location, write fillLabel into target at current location and continue for each pixel in neighborhood defined by shape if neighborhood pixel is in the same connected component and fillLabel has not been written into that location yet.
`static <T extends Type<T>,U extends Type<U>> void`	FloodFill.`fill(RandomAccessible<T> source, RandomAccessible<U> target, Localizable seed, U fillLabel, Shape shape, Filter<Pair<T,U>,Pair<T,U>> filter)` Deprecated.

Uses of Shape in net.imglib2.algorithm.labeling

Methods in net.imglib2.algorithm.labeling with parameters of type Shape
Modifier and Type	Method and Description
`static <B extends BooleanType<B>,L extends IntegerType<L>> void`	ConnectedComponentAnalysis.`connectedComponents(RandomAccessibleInterval<B> mask, RandomAccessibleInterval<L> labeling, Shape shape)` Implementation of connected component analysis that uses `IntArrayRankedUnionFind` to find sets of pixels that are connected with respect to a neighborhood (`shape`) over a binary mask.
`static <B extends BooleanType<B>,L extends IntegerType<L>> void`	ConnectedComponentAnalysis.`connectedComponents(RandomAccessibleInterval<B> mask, RandomAccessibleInterval<L> labeling, Shape shape, LongFunction<UnionFind> unionFindFactory, ToLongBiFunction<Localizable,L> idForPixel, LongUnaryOperator idForSet)` Implementation of connected component analysis that uses `UnionFind` to find sets of pixels that are connected with respect to a neighborhood (`shape`) over a binary mask.

Uses of Shape in net.imglib2.algorithm.localextrema

Methods in net.imglib2.algorithm.localextrema with parameters of type Shape
Modifier and Type	Method and Description
`static <P,T> List<P>`	LocalExtrema.`findLocalExtrema(RandomAccessible<T> source, Interval interval, LocalExtrema.LocalNeighborhoodCheck<P,T> localNeighborhoodCheck, Shape shape)` Find pixels that are extrema in their local neighborhood.
`static <P,T> List<P>`	LocalExtrema.`findLocalExtrema(RandomAccessible<T> source, Interval interval, LocalExtrema.LocalNeighborhoodCheck<P,T> localNeighborhoodCheck, Shape shape, ExecutorService service, int numTasks)` Find pixels that are extrema in their local neighborhood.
`static <P,T> List<P>`	LocalExtrema.`findLocalExtrema(RandomAccessible<T> source, Interval interval, LocalExtrema.LocalNeighborhoodCheck<P,T> localNeighborhoodCheck, Shape shape, ExecutorService service, int numTasks, int splitDim)` Find pixels that are extrema in their local neighborhood.
`static <P,T> List<P>`	LocalExtrema.`findLocalExtrema(RandomAccessibleInterval<T> source, LocalExtrema.LocalNeighborhoodCheck<P,T> localNeighborhoodCheck, Shape shape)` Find pixels that are extrema in their local neighborhood.
`static <P,T> List<P>`	LocalExtrema.`findLocalExtrema(RandomAccessibleInterval<T> source, LocalExtrema.LocalNeighborhoodCheck<P,T> localNeighborhoodCheck, Shape shape, ExecutorService service, int numTasks)` Find pixels that are extrema in their local neighborhood.
`static <P,T> List<P>`	LocalExtrema.`findLocalExtrema(RandomAccessibleInterval<T> source, LocalExtrema.LocalNeighborhoodCheck<P,T> localNeighborhoodCheck, Shape shape, ExecutorService service, int numTasks, int splitDim)` Find pixels that are extrema in their local neighborhood.
`static long[]`	LocalExtrema.`getRequiredBorderSize(Shape shape, int nDim)` Get the required border size based on the bounding box of the neighborhood specified by `shape`.

Uses of Shape in net.imglib2.algorithm.morphology

Methods in net.imglib2.algorithm.morphology that return Shape
Modifier and Type	Method and Description
`static Shape`	StructuringElements.`periodicLine(long span, int[] increments)` Creates a new periodic line structuring element, that will iterate over `2 × span + 1` pixels as follow:

Methods in net.imglib2.algorithm.morphology that return types with arguments of type Shape
Modifier and Type	Method and Description
`static List<Shape>`	StructuringElements.`diamond(int radius, int dimensionality)` Generates a centered flat diamond structuring element for morphological operations.
`static List<Shape>`	StructuringElements.`diamond(int radius, int dimensionality, boolean decompose)` Generates a centered flat diamond structuring element for morphological operations.
`static List<Shape>`	StructuringElements.`disk(long radius, int dimensionality)` Generates a centered disk flat structuring element for morphological operations.
`static List<Shape>`	StructuringElements.`disk(long radius, int dimensionality, int decomposition)` Generates a centered disk flat structuring element for morphological operations.
`static List<Shape>`	StructuringElements.`rectangle(int[] halfSpans)` Generates a symmetric, centered, rectangular flat structuring element for morphological operations.
`static List<Shape>`	StructuringElements.`rectangle(int[] halfSpans, boolean decompose)` Generates a symmetric, centered, rectangular flat structuring element for morphological operations.
`static List<Shape>`	StructuringElements.`square(int radius, int dimensionality)` Generates a centered square flat structuring element for morphological operations.
`static List<Shape>`	StructuringElements.`square(int radius, int dimensionality, boolean decompose)` Generates a centered square flat structuring element for morphological operations.

Methods in net.imglib2.algorithm.morphology with parameters of type Shape
Modifier and Type	Method and Description
`static <T extends RealType<T>> Img<T>`	BlackTopHat.`blackTopHat(Img<T> source, Shape strel, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation, on a `RealType` `Img` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T> & Sub<T>> Img<T>`	BlackTopHat.`blackTopHat(Img<T> source, Shape strel, T minVal, T maxVal, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation, using a `Shape` as a flat structuring element.
`static <T extends RealType<T>> void`	BlackTopHat.`blackTopHat(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation on a `RealType` source `RandomAccessible`, using a `Shape` as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends Type<T> & Comparable<T> & Sub<T>> void`	BlackTopHat.`blackTopHat(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, T minVal, T maxVal, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation on a source `RandomAccessible`, using a `Shape` as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends RealType<T>> void`	BlackTopHat.`blackTopHatInPlace(RandomAccessible<T> source, Interval interval, Shape strel, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation, on a `RealType` `Img` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T> & Sub<T>> void`	BlackTopHat.`blackTopHatInPlace(RandomAccessible<T> source, Interval interval, Shape strel, T minVal, T maxVal, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation, using a `Shape` as a flat structuring element.
`static <T extends RealType<T>> Img<T>`	Closing.`close(Img<T> source, Shape strel, int numThreads)` Performs the morphological closing operation on a `RealType` `Img`, using a `Shape` as a structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Closing.`close(Img<T> source, Shape strel, T minVal, T maxVal, int numThreads)` Performs the morphological closing operation on an `Img` of `Comparable` , using a `Shape` as a structuring element.
`static <T extends RealType<T>> void`	Closing.`close(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, int numThreads)` Performs the morphological closing operation on a `RealType` source `RandomAccessible`, using a `Shape` as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends Type<T> & Comparable<T>> void`	Closing.`close(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, T minVal, T maxVal, int numThreads)` Performs the morphological closing operation on a source `RandomAccessible`, using a `Shape` as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends RealType<T>> void`	Closing.`closeInPlace(RandomAccessibleInterval<T> source, Interval interval, Shape strel, int numThreads)` Performs the closing morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> void`	Closing.`closeInPlace(RandomAccessibleInterval<T> source, Interval interval, Shape strel, T minVal, T maxVal, int numThreads)` Performs the closing morphological operation, on a `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T> long[][]`	MorphologyUtils.`computeTargetImageDimensionsAndOffset(Interval source, Shape strel)` Static util to compute the final image dimensions and required offset when performing a full dilation with the specified strel.
`static <T extends RealType<T>> Img<T>`	Dilation.`dilate(Img<T> source, Shape strel, int numThreads)` Performs the dilation morphological operation, on a `RealType` `Img` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Dilation.`dilate(Img<T> source, Shape strel, T minVal, int numThreads)` Performs the dilation morphological operation, on an `Img` using a `Shape` as a flat structuring element.
`static <T extends RealType<T>> void`	Dilation.`dilate(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, int numThreads)` Performs the dilation morphological operation, on a `RealType` `RandomAccessible` as a source and writing results in an `IterableInterval`.
`static <T extends Type<T> & Comparable<T>> void`	Dilation.`dilate(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, T minVal, int numThreads)` Performs the dilation morphological operation, using a `RandomAccessible` as a source and writing results in an `IterableInterval`.
`static <T extends RealType<T>> Img<T>`	Dilation.`dilateFull(Img<T> source, Shape strel, int numThreads)` Performs the dilation morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Dilation.`dilateFull(Img<T> source, Shape strel, T minVal, int numThreads)` Performs the dilation morphological operation, on an `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> void`	Dilation.`dilateInPlace(RandomAccessibleInterval<T> source, Interval interval, Shape strel, int numThreads)` Performs the dilation morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> void`	Dilation.`dilateInPlace(RandomAccessibleInterval<T> source, Interval interval, Shape strel, T minVal, int numThreads)` Performs the dilation morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends RealType<T>> Img<T>`	Erosion.`erode(Img<T> source, Shape strel, int numThreads)` Performs the erosion morphological operation, on a `RealType` `Img` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Erosion.`erode(Img<T> source, Shape strel, T maxVal, int numThreads)` Performs the erosion morphological operation, on an `Img` using a `Shape` as a flat structuring element.
`static <T extends RealType<T>> void`	Erosion.`erode(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, int numThreads)` Performs the erosion morphological operation, on a `RealType` `RandomAccessible` as a source and writing results in an `IterableInterval`.
`static <T extends Type<T> & Comparable<T>> void`	Erosion.`erode(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, T maxVal, int numThreads)` Performs the erosion morphological operation, using a `RandomAccessible` as a source and writing results in an `IterableInterval`.
`static <T extends RealType<T>> Img<T>`	Erosion.`erodeFull(Img<T> source, Shape strel, int numThreads)` Performs the erosion morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Erosion.`erodeFull(Img<T> source, Shape strel, T maxVal, int numThreads)` Performs the erosion morphological operation, on an `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> void`	Erosion.`erodeInPlace(RandomAccessible<T> source, Interval interval, Shape strel, int numThreads)` Performs the erosion morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> void`	Erosion.`erodeInPlace(RandomAccessibleInterval<T> source, Interval interval, Shape strel, T maxVal, int numThreads)` Performs the erosion morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static Neighborhood<BitType>`	MorphologyUtils.`getNeighborhood(Shape shape, EuclideanSpace space)`
`static <T extends RealType<T>> Img<T>`	Opening.`open(Img<T> source, Shape strel, int numThreads)` Performs the morphological opening operation on a `RealType` `Img`, using a `Shape` as a structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Opening.`open(Img<T> source, Shape strel, T minVal, T maxVal, int numThreads)` Performs the morphological opening operation on an `Img` of `Comparable` , using a `Shape` as a structuring element.
`static <T extends RealType<T>> void`	Opening.`open(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, int numThreads)` Performs the morphological opening operation on a `RealType` source `RandomAccessible`, using a `Shape` as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends Type<T> & Comparable<T>> void`	Opening.`open(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, T minVal, T maxVal, int numThreads)` Performs the morphological opening operation on a source `RandomAccessible`, using a `Shape` as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends RealType<T>> void`	Opening.`openInPlace(RandomAccessibleInterval<T> source, Interval interval, Shape strel, int numThreads)` Performs the opening morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> void`	Opening.`openInPlace(RandomAccessibleInterval<T> source, Interval interval, Shape strel, T minVal, T maxVal, int numThreads)` Performs the opening morphological operation, on a `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static String`	MorphologyUtils.`printNeighborhood(Shape shape, int dimensionality)` Returns a string representation of the specified flat structuring element (given as a `Shape`), cast over the dimensionality specified by an `EuclideanSpace`.
`static <T extends RealType<T>> Img<T>`	TopHat.`topHat(Img<T> source, Shape strel, int numThreads)` Performs the top-hat (white top-hat) morphological operation, on a `RealType` `Img` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T> & Sub<T>> Img<T>`	TopHat.`topHat(Img<T> source, Shape strel, T minVal, T maxVal, int numThreads)` Performs the top-hat (white top-hat) morphological operation, using a `Shape` as a flat structuring element.
`static <T extends RealType<T>> void`	TopHat.`topHat(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, int numThreads)` Performs the top-hat (white top-hat) morphological operation on a `RealType` source `RandomAccessible`, using a `Shape` as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends Type<T> & Comparable<T> & Sub<T>> void`	TopHat.`topHat(RandomAccessible<T> source, IterableInterval<T> target, Shape strel, T minVal, T maxVal, int numThreads)` Performs the top-hat (white top-hat) morphological operation on a source `RandomAccessible`, using a `Shape` as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends RealType<T>> void`	TopHat.`topHatInPlace(RandomAccessible<T> source, Interval interval, Shape strel, int numThreads)` Performs the top-hat (white top-hat) morphological operation, on a `RealType` `Img` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T> & Sub<T>> void`	TopHat.`topHatInPlace(RandomAccessible<T> source, Interval interval, Shape strel, T minVal, T maxVal, int numThreads)` Performs the top-hat (white top-hat) morphological operation, using a `Shape` as a flat structuring element.

Method parameters in net.imglib2.algorithm.morphology with type arguments of type Shape
Modifier and Type	Method and Description
`static <T extends RealType<T>> Img<T>`	BlackTopHat.`blackTopHat(Img<T> source, List<? extends Shape> strels, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T> & Sub<T>> Img<T>`	BlackTopHat.`blackTopHat(Img<T> source, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation, using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> void`	BlackTopHat.`blackTopHat(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation on a `RealType` source `RandomAccessible`, using a list of `Shape`s as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends Type<T> & Comparable<T> & Sub<T>> void`	BlackTopHat.`blackTopHat(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation on a source `RandomAccessible`, using a list of `Shape`s as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends RealType<T>> void`	BlackTopHat.`blackTopHatInPlace(RandomAccessible<T> source, Interval interval, List<? extends Shape> strels, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T> & Sub<T>> void`	BlackTopHat.`blackTopHatInPlace(RandomAccessible<T> source, Interval interval, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the black top-hat (or bottom-hat) morphological operation, using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> Img<T>`	Closing.`close(Img<T> source, List<? extends Shape> strels, int numThreads)` Performs the morphological closing operation on a `RealType` `Img`, using a list of `Shape`s as a structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Closing.`close(Img<T> source, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the morphological closing operation on an `Img` of `Comparable` , using a list of `Shape`s as a structuring element.
`static <T extends RealType<T>> void`	Closing.`close(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, int numThreads)` Performs the morphological closing operation on a `RealType` source `RandomAccessible`, using a list of `Shape`s as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends Type<T> & Comparable<T>> void`	Closing.`close(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the morphological closing operation on a source `RandomAccessible`, using a list of `Shape`s as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends RealType<T>> void`	Closing.`closeInPlace(RandomAccessibleInterval<T> source, Interval interval, List<? extends Shape> strels, int numThreads)` Performs the closing morphological operation, on a source `RandomAccessibleInterval` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> void`	Closing.`closeInPlace(RandomAccessibleInterval<T> source, Interval interval, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the closing morphological operation, on a `RandomAccessibleInterval` using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> Img<T>`	Dilation.`dilate(Img<T> source, List<? extends Shape> strels, int numThreads)` Performs the dilation morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Dilation.`dilate(Img<T> source, List<? extends Shape> strels, T minVal, int numThreads)` Performs the dilation morphological operation, on an `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> void`	Dilation.`dilate(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, int numThreads)` Performs the dilation morphological operation, on a `RealType` `RandomAccessible` as a source and writing results in an `IterableInterval`.
`static <T extends Type<T> & Comparable<T>> void`	Dilation.`dilate(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, T minVal, int numThreads)` Performs the dilation morphological operation, using a `RandomAccessible` as a source and writing results in an `IterableInterval`.
`static <T extends RealType<T>> Img<T>`	Dilation.`dilateFull(Img<T> source, List<? extends Shape> strels, int numThreads)` Performs the dilation morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Dilation.`dilateFull(Img<T> source, List<? extends Shape> strels, T minVal, int numThreads)` Performs the dilation morphological operation, on an `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> void`	Dilation.`dilateInPlace(RandomAccessibleInterval<T> source, Interval interval, List<? extends Shape> strels, int numThreads)` Performs the dilation morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> void`	Dilation.`dilateInPlace(RandomAccessibleInterval<T> source, Interval interval, List<? extends Shape> strels, T minVal, int numThreads)` Performs the dilation morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends RealType<T>> Img<T>`	Erosion.`erode(Img<T> source, List<? extends Shape> strels, int numThreads)` Performs the erosion morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Erosion.`erode(Img<T> source, List<? extends Shape> strels, T maxVal, int numThreads)` Performs the erosion morphological operation, on an `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> void`	Erosion.`erode(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, int numThreads)` Performs the erosion morphological operation, on a `RealType` `RandomAccessible` as a source and writing results in an `IterableInterval`.
`static <T extends Type<T> & Comparable<T>> void`	Erosion.`erode(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, T maxVal, int numThreads)` Performs the erosion morphological operation, using a `RandomAccessible` as a source and writing results in an `IterableInterval`.
`static <T extends RealType<T>> Img<T>`	Erosion.`erodeFull(Img<T> source, List<? extends Shape> strels, int numThreads)` Performs the erosion morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Erosion.`erodeFull(Img<T> source, List<? extends Shape> strels, T maxVal, int numThreads)` Performs the erosion morphological operation, on an `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> void`	Erosion.`erodeInPlace(RandomAccessible<T> source, Interval interval, List<? extends Shape> strels, int numThreads)` Performs the erosion morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> void`	Erosion.`erodeInPlace(RandomAccessibleInterval<T> source, Interval interval, List<? extends Shape> strels, T maxVal, int numThreads)` Performs the erosion morphological operation, on a `RealType` `RandomAccessibleInterval` using a `Shape` as a flat structuring element.
`static <T extends RealType<T>> Img<T>`	Opening.`open(Img<T> source, List<? extends Shape> strels, int numThreads)` Performs the morphological opening operation on a `RealType` `Img`, using a list of `Shape`s as a structuring element.
`static <T extends Type<T> & Comparable<T>> Img<T>`	Opening.`open(Img<T> source, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the morphological opening operation on an `Img` of `Comparable` , using a list of `Shape`s as a structuring element.
`static <T extends RealType<T>> void`	Opening.`open(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, int numThreads)` Performs the morphological opening operation on a `RealType` source `RandomAccessible`, using a list of `Shape`s as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends Type<T> & Comparable<T>> void`	Opening.`open(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the morphological opening operation on a source `RandomAccessible`, using a list of `Shape`s as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends RealType<T>> void`	Opening.`openInPlace(RandomAccessibleInterval<T> source, Interval interval, List<? extends Shape> strels, int numThreads)` Performs the opening morphological operation, on a source `RandomAccessibleInterval` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T>> void`	Opening.`openInPlace(RandomAccessibleInterval<T> source, Interval interval, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the opening morphological operation, on a `RandomAccessibleInterval` using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> Img<T>`	TopHat.`topHat(Img<T> source, List<? extends Shape> strels, int numThreads)` Performs the top-hat (white top-hat) morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T> & Sub<T>> Img<T>`	TopHat.`topHat(Img<T> source, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the top-hat (white top-hat) morphological operation, using a list of `Shape`s as a flat structuring element.
`static <T extends RealType<T>> void`	TopHat.`topHat(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, int numThreads)` Performs the top-hat (white top-hat) morphological operation on a `RealType` source `RandomAccessible`, using a list of `Shape`s as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends Type<T> & Comparable<T> & Sub<T>> void`	TopHat.`topHat(RandomAccessible<T> source, IterableInterval<T> target, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the top-hat (white top-hat) morphological operation on a source `RandomAccessible`, using a list of `Shape`s as a structuring element, and writes the result on a specified target which must be an `IterableInterval`.
`static <T extends RealType<T>> void`	TopHat.`topHatInPlace(RandomAccessible<T> source, Interval interval, List<? extends Shape> strels, int numThreads)` Performs the top-hat (white top-hat) morphological operation, on a `RealType` `Img` using a list of `Shape`s as a flat structuring element.
`static <T extends Type<T> & Comparable<T> & Sub<T>> void`	TopHat.`topHatInPlace(RandomAccessible<T> source, Interval interval, List<? extends Shape> strels, T minVal, T maxVal, int numThreads)` Performs the top-hat (white top-hat) morphological operation, using a list of `Shape`s as a flat structuring element.

Uses of Shape in net.imglib2.algorithm.neighborhood

Classes in net.imglib2.algorithm.neighborhood that implement Shape
Modifier and Type	Class and Description
`class`	`CenteredRectangleShape` A factory for Accessibles on rectangular neighborhoods.
`class`	`DiamondShape` TODO
`class`	`DiamondTipsShape` TODO
`class`	`GeneralRectangleShape` A factory for Accessibles on rectangular neighboorhoods.
`class`	`HorizontalLineShape` A `Shape` representing finite, centered, symmetric lines, that are parallel to the image axes.
`class`	`HyperSphereShape` A factory for Accessibles on hyper-sphere neighboorhoods.
`class`	`PairOfPointsShape` A `Shape` representing a pair of points.
`class`	`PeriodicLineShape` A factory for Accessibles on `PeriodicLineNeighborhood`s, that iterate over what is termed "Periodic lines", and is best explained in Ronald Jones and Pierre Soilles publication:
`class`	`RectangleShape` A factory for Accessibles on rectangular neighboorhoods.

Uses of Interfacenet.imglib2.algorithm.neighborhood.Shape

Uses of Shape in net.imglib2.algorithm.fill

Uses of Shape in net.imglib2.algorithm.labeling

Uses of Shape in net.imglib2.algorithm.localextrema

Uses of Shape in net.imglib2.algorithm.morphology

Uses of Shape in net.imglib2.algorithm.neighborhood

Uses of Interface
net.imglib2.algorithm.neighborhood.Shape