| Package | Description |
|---|---|
| net.imagej | |
| net.imagej.display | |
| net.imagej.interval | |
| net.imagej.omero.roi.project | |
| net.imagej.overlay | |
| net.imagej.space |
| Modifier and Type | Interface and Description |
|---|---|
interface |
Data
A data object is the superinterface for all types of N-dimensional data
displayable in a cartesian space.
|
interface |
Dataset
Dataset is the primary image data structure in ImageJ.
|
interface |
ImgPlusMetadata
An interface which collects all metadata associated with an
ImgPlus. |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractData
Base implementation of
Data. |
class |
DefaultDataset
Default implementation of
Dataset. |
class |
ImgPlus<T>
A simple container for storing an
Img together with its metadata. |
| Modifier and Type | Interface and Description |
|---|---|
interface |
ImageDisplay
|
| Modifier and Type | Class and Description |
|---|---|
class |
DefaultImageDisplay
Default implementation of
ImageDisplay. |
| Modifier and Type | Interface and Description |
|---|---|
interface |
CalibratedRealInterval<A extends CalibratedAxis>
A CalibratedRealInterval marries a
TypedRealInterval with a
CalibratedSpace. |
interface |
TypedRealInterval<A extends TypedAxis>
A
RealInterval over a TypedSpace. |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractCalibratedRealInterval<A extends CalibratedAxis>
Abstract base class for
CalibratedRealInterval. |
class |
CombinedCalibratedRealInterval<A extends CalibratedAxis,S extends CalibratedRealInterval<A>>
A
CombinedRealInterval that has calibrated axes. |
class |
CombinedRealInterval<A extends TypedAxis,S extends TypedRealInterval<A>>
A
CombinedRealInterval is a RealInterval (specifically a
TypedRealInterval) which is a union of other
TypedRealIntervals. |
class |
DefaultCalibratedRealInterval
Default implementation of
CalibratedRealInterval. |
| Constructor and Description |
|---|
ProjectedOMERORealMask(OMERORealMask<S> shape,
AnnotatedSpace<? extends TypedAxis> space) |
| Modifier and Type | Interface and Description |
|---|---|
interface |
Overlay
An overlay is a vector object, typically displayed with
Datasets. |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractOverlay
Abstract superclass of
Overlay implementations. |
class |
AbstractROIOverlay<R extends RegionOfInterest>
An overlay that has an associated region of interest
|
class |
AngleOverlay
Represents an angle having a center point and two end points.
|
class |
BinaryMaskOverlay<U extends BitType,V extends Img<U>>
TODO
|
class |
CompositeOverlay
A composite of one or more overlays.
|
class |
EllipseOverlay
An ellipse bounded by an axis-aligned rectangle, backed by an
EllipseRegionOfInterest. |
class |
GeneralPathOverlay
An overlay for the
GeneralPathRegionOfInterest. |
class |
LineOverlay
Represents a line going from here to there, possibly with arrows on one end,
the other or both.
|
class |
PointOverlay
Represents a user specified collection of points
|
class |
PolygonOverlay
TODO
|
class |
RectangleOverlay
An axis-aligned rectangle, backed by a
RectangleRegionOfInterest. |
class |
TextOverlay
Represents an
Overlay that contains a string of text. |
| Modifier and Type | Interface and Description |
|---|---|
interface |
CalibratedSpace<A extends CalibratedAxis>
A Euclidean space whose dimensions have units and calibrations.
|
interface |
LinearSpace<A extends LinearAxis>
A
CalibratedSpace whose axes are of type LinearAxis. |
interface |
TypedSpace<A extends TypedAxis>
A Euclidean space with typed dimensional axes.
|
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractAnnotatedSpace<A extends Axis>
Abstract base class for
AnnotatedSpace implementations. |
class |
AbstractCalibratedSpace<A extends CalibratedAxis>
Abstract base class for
CalibratedSpace. |
class |
AbstractLinearSpace<A extends LinearAxis>
Abstract base class for
LinearSpace. |
class |
AbstractTypedSpace<A extends TypedAxis>
Abstract base class for
TypedSpace. |
class |
CombinedSpace<A extends TypedAxis,S extends TypedSpace<A>>
A
CombinedSpace is a EuclideanSpace (specifically a
TypedSpace) which is a union of other TypedSpaces. |
class |
DefaultCalibratedSpace
Default implementation of
CalibratedSpace. |
class |
DefaultLinearSpace
Default implementation of
LinearSpace. |
class |
DefaultTypedSpace
Default implementation of
TypedSpace. |
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