DefaultFrangi (ImageJ2 Javadocs 0-SNAPSHOT API)

java.lang.Object
- net.imagej.ops.AbstractOp
- - net.imagej.ops.special.AbstractUnaryOp<I,O>
 - - net.imagej.ops.special.computer.AbstractUnaryComputerOp<RandomAccessibleInterval<T>,RandomAccessibleInterval>
 - - net.imagej.ops.filter.vesselness.DefaultFrangi<T,U>

All Implemented Interfaces:

Runnable, Environmental, Initializable, Op, Ops.Filter.FrangiVesselness, NullaryComputerOp<RandomAccessibleInterval>, UnaryComputerOp<RandomAccessibleInterval<T>,RandomAccessibleInterval>, NullaryOp<RandomAccessibleInterval>, Output<RandomAccessibleInterval>, OutputMutable<RandomAccessibleInterval>, SpecialOp, UnaryInput<RandomAccessibleInterval<T>>, UnaryOp<RandomAccessibleInterval<T>,RandomAccessibleInterval>, Threadable, Command, SciJavaPlugin
```
public class DefaultFrangi<T extends RealType<T>,U extends RealType>
extends AbstractUnaryComputerOp<RandomAccessibleInterval<T>,RandomAccessibleInterval>
implements Ops.Filter.FrangiVesselness
```
Input is a 2- or 3-dimensional grayscales image. Applies the Frangi Vesselness filter to an image to highlight vessel-like structures. The spacing parameter refers to the physical distance between data points in the RandomAccessibleInterval, and can vary for each dimension of the image.

Author:

Gabe Selzer

Nested Class Summary
- Nested classes/interfaces inherited from interface net.imagej.ops.special.SpecialOp
  SpecialOp.Flavor

Field Summary

Fields
Modifier and Type	Field and Description
`protected double`	`alpha`
`protected double`	`beta`
`static int`	`MAX_DIMS`
`protected double`	`maximumVesselness`
`static int`	`MIN_DIMS`
`protected double`	`minimumVesselness`

Fields inherited from interface net.imagej.ops.Ops.Filter.FrangiVesselness
NAME

Constructor Summary

Constructors
Constructor and Description

DefaultFrangi()

Constructors
Constructor and Description
`DefaultFrangi()`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`compute(RandomAccessibleInterval<T> input, RandomAccessibleInterval<U> output)` Computes the output given some input.
`double`	`getMaximumVesselness()`
`double`	`getMinimumVesselness()`

Methods inherited from class net.imagej.ops.special.computer.AbstractUnaryComputerOp
in, out, setInput, setOutput

Methods inherited from class net.imagej.ops.AbstractOp
ops, setEnvironment

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.lang.Runnable
run

Methods inherited from interface net.imagej.ops.Environmental
ops, setEnvironment

Methods inherited from interface net.imagej.ops.special.computer.UnaryComputerOp
compute, getIndependentInstance, run, run

Methods inherited from interface net.imagej.ops.special.UnaryOp
getArity

Methods inherited from interface net.imagej.ops.special.computer.NullaryComputerOp
run

Methods inherited from interface net.imagej.ops.special.SpecialOp
candidates, filterArity, op

Methods inherited from interface net.imagej.ops.Initializable
initialize

- Field Detail
 - MIN_DIMS
```
public static final int MIN_DIMS
```
 See Also:
 
 Constant Field Values
 - MAX_DIMS
```
public static final int MAX_DIMS
```
 See Also:
 
 Constant Field Values
 - alpha
```
protected double alpha
```
 - beta
```
protected double beta
```
 - minimumVesselness
```
protected double minimumVesselness
```
 - maximumVesselness
```
protected double maximumVesselness
```
- Constructor Detail
 - DefaultFrangi
```
public DefaultFrangi()
```
- Method Detail
 - getMinimumVesselness
```
public double getMinimumVesselness()
```
 - getMaximumVesselness
```
public double getMaximumVesselness()
```
 - compute
```
public void compute(RandomAccessibleInterval<T> input,
 RandomAccessibleInterval output)
```
 Description copied from interface: UnaryComputerOp
 
 Computes the output given some input.
 
 Specified by:
 
 compute in interface UnaryComputerOp<RandomAccessibleInterval<T extends RealType<T>>,RandomAccessibleInterval>>
 
 Parameters:
 
 input - Argument to the computation, which must be non-null
 
 output - Object where the computation's result will be stored, which must be non-null and a different object than input

Class DefaultFrangi<T extends RealType<T>,U extends RealType<U>>

Nested Class Summary

Nested classes/interfaces inherited from interface net.imagej.ops.special.SpecialOp

Field Summary

Fields inherited from interface net.imagej.ops.Ops.Filter.FrangiVesselness

Constructor Summary

Method Summary

Methods inherited from class net.imagej.ops.special.computer.AbstractUnaryComputerOp

Methods inherited from class net.imagej.ops.AbstractOp

Methods inherited from class java.lang.Object

Methods inherited from interface java.lang.Runnable

Methods inherited from interface net.imagej.ops.Environmental

Methods inherited from interface net.imagej.ops.special.computer.UnaryComputerOp

Methods inherited from interface net.imagej.ops.special.UnaryOp

Methods inherited from interface net.imagej.ops.special.computer.NullaryComputerOp

Methods inherited from interface net.imagej.ops.special.SpecialOp

Methods inherited from interface net.imagej.ops.Initializable

Field Detail

MIN_DIMS

MAX_DIMS

alpha

beta

minimumVesselness

maximumVesselness

Constructor Detail

DefaultFrangi

Method Detail

getMinimumVesselness

getMaximumVesselness

compute