PadAndRichardsonLucy (ImageJ2 Javadocs 0-SNAPSHOT API)

java.lang.Object
- net.imagej.ops.AbstractOp
- - net.imagej.ops.special.AbstractUnaryOp<I1,O>
 - - net.imagej.ops.special.AbstractBinaryOp<I1,I2,O>
 - - net.imagej.ops.special.computer.AbstractBinaryComputerOp<RandomAccessibleInterval,RandomAccessibleInterval<K>,RandomAccessibleInterval<O>>
 - net.imagej.ops.filter.AbstractPadAndFFTFilter<I,O,K,C>
 
 net.imagej.ops.deconvolve.PadAndRichardsonLucy<I,O,K,C>

Type Parameters:

I -

O -

K -

C -

All Implemented Interfaces:

Runnable, Environmental, Initializable, Op, Ops.Deconvolve.RichardsonLucy, BinaryInput<RandomAccessibleInterval,RandomAccessibleInterval<K>>, BinaryOp<RandomAccessibleInterval,RandomAccessibleInterval<K>,RandomAccessibleInterval<O>>, BinaryComputerOp<RandomAccessibleInterval,RandomAccessibleInterval<K>,RandomAccessibleInterval<O>>, NullaryComputerOp<RandomAccessibleInterval<O>>, UnaryComputerOp<RandomAccessibleInterval,RandomAccessibleInterval<O>>, NullaryOp<RandomAccessibleInterval<O>>, Output<RandomAccessibleInterval<O>>, OutputMutable<RandomAccessibleInterval<O>>, SpecialOp, UnaryInput<RandomAccessibleInterval>, UnaryOp<RandomAccessibleInterval,RandomAccessibleInterval<O>>, Threadable, Command, SciJavaPlugin

Direct Known Subclasses:

PadAndRichardsonLucyTV
```
public class PadAndRichardsonLucy & NativeType,O extends RealType<O> & NativeType<O>,K extends RealType<K> & NativeType<K>,C extends ComplexType<C> & NativeType<C>>
extends AbstractPadAndFFTFilter<I,O,K,C>
implements Ops.Deconvolve.RichardsonLucy
```
Richardson Lucy function op that operates on (@link RandomAccessibleInterval) (Lucy, L. B. (1974). "An iterative technique for the rectification of observed distributions".)

Author:

Brian Northan

Nested Class Summary
- Nested classes/interfaces inherited from interface net.imagej.ops.special.SpecialOp
  SpecialOp.Flavor

Field Summary
- Fields inherited from interface net.imagej.ops.Ops.Deconvolve.RichardsonLucy
  NAME

Constructor Summary

Constructors
Constructor and Description

PadAndRichardsonLucy()

Constructors
Constructor and Description
`PadAndRichardsonLucy()`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`BinaryComputerOp<RandomAccessibleInterval<I>,RandomAccessibleInterval<K>,RandomAccessibleInterval<O>>`	`createFilterComputer(RandomAccessibleInterval<I> paddedInput, RandomAccessibleInterval<K> paddedKernel, RandomAccessibleInterval<C> fftImg, RandomAccessibleInterval<C> fftKernel, RandomAccessibleInterval<O> output)` create a richardson lucy filter
`protected UnaryComputerOp<RandomAccessibleInterval<O>,RandomAccessibleInterval<O>>`	`getComputeEstimateOp()` set up and return the compute estimate op.
`void`	`initialize()` Initializes the object.

Methods inherited from class net.imagej.ops.filter.AbstractPadAndFFTFilter
compute, createOutput, getBorderSize, getOBFInput, getOBFKernel, getOutType, setOBFInput, setOBFKernel

Methods inherited from class net.imagej.ops.special.computer.AbstractBinaryComputerOp
in1, in2, out, setInput1, setInput2, setOutput

Methods inherited from class net.imagej.ops.AbstractOp
ops, setEnvironment

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.lang.Runnable
run

Methods inherited from interface net.imagej.ops.Environmental
ops, setEnvironment

Methods inherited from interface net.imagej.ops.special.computer.BinaryComputerOp
compute, getIndependentInstance, run, run

Methods inherited from interface net.imagej.ops.special.BinaryOp
getArity

Methods inherited from interface net.imagej.ops.special.BinaryInput
in, setInput

Methods inherited from interface net.imagej.ops.special.computer.UnaryComputerOp
compute, run

Methods inherited from interface net.imagej.ops.special.computer.NullaryComputerOp
run

Methods inherited from interface net.imagej.ops.special.SpecialOp
candidates, filterArity, op

Constructor Detail
- PadAndRichardsonLucy
```
public PadAndRichardsonLucy()
```

Method Detail

initialize
```
public void initialize()
```
Description copied from interface: Initializable

Initializes the object.

Specified by:

initialize in interface Initializable

Overrides:

initialize in class AbstractPadAndFFTFilter & NativeType,O extends RealType<O> & NativeType<O>,K extends RealType<K> & NativeType<K>,C extends ComplexType<C> & NativeType<C>>

createFilterComputer

public BinaryComputerOp<RandomAccessibleInterval<I>,RandomAccessibleInterval<K>,RandomAccessibleInterval<O>> createFilterComputer(RandomAccessibleInterval<I> paddedInput,
                                                                                                                                  RandomAccessibleInterval<K> paddedKernel,
                                                                                                                                  RandomAccessibleInterval<C> fftImg,
                                                                                                                                  RandomAccessibleInterval<C> fftKernel,
                                                                                                                                  RandomAccessibleInterval<O> output)

create a richardson lucy filter

Specified by:: createFilterComputer in class AbstractPadAndFFTFilter & NativeType,O extends RealType<O> & NativeType<O>,K extends RealType<K> & NativeType<K>,C extends ComplexType<C> & NativeType<C>>

getComputeEstimateOp
```
protected UnaryComputerOp<RandomAccessibleInterval<O>,RandomAccessibleInterval<O>> getComputeEstimateOp()
```
set up and return the compute estimate op. This function can be over-ridden to implement different types of richardson lucy (like total variation richardson lucy)

Returns:

compute estimate op

Class PadAndRichardsonLucy<I extends RealType<I> & NativeType<I>,O extends RealType<O> & NativeType<O>,K extends RealType<K> & NativeType<K>,C extends ComplexType<C> & NativeType<C>>

Nested Class Summary

Nested classes/interfaces inherited from interface net.imagej.ops.special.SpecialOp

Field Summary

Fields inherited from interface net.imagej.ops.Ops.Deconvolve.RichardsonLucy

Constructor Summary

Method Summary

Methods inherited from class net.imagej.ops.filter.AbstractPadAndFFTFilter

Methods inherited from class net.imagej.ops.special.computer.AbstractBinaryComputerOp

Methods inherited from class net.imagej.ops.AbstractOp

Methods inherited from class java.lang.Object

Methods inherited from interface java.lang.Runnable

Methods inherited from interface net.imagej.ops.Environmental

Methods inherited from interface net.imagej.ops.special.computer.BinaryComputerOp

Methods inherited from interface net.imagej.ops.special.BinaryOp

Methods inherited from interface net.imagej.ops.special.BinaryInput

Methods inherited from interface net.imagej.ops.special.computer.UnaryComputerOp

Methods inherited from interface net.imagej.ops.special.computer.NullaryComputerOp

Methods inherited from interface net.imagej.ops.special.SpecialOp

Constructor Detail

PadAndRichardsonLucy

Method Detail

initialize

createFilterComputer

getComputeEstimateOp