MTKT (ImageJ2 Javadocs 0-SNAPSHOT API)

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java.lang.Object
- net.imagej.ops.AbstractOp
- - net.imagej.ops.special.AbstractUnaryOp<I1,O>
  - - net.imagej.ops.special.AbstractBinaryOp<I1,I2,O>
    - - net.imagej.ops.special.function.AbstractBinaryFunctionOp<RandomAccessibleInterval<T>,RandomAccessibleInterval<U>,Double>
      - net.imagej.ops.coloc.maxTKendallTau.MTKT<T,U>

Type Parameters:

T - Type of the first image

U - Type of the second image

All Implemented Interfaces:

Runnable, Contingent, Environmental, Initializable, Op, Ops.Coloc.MaxTKendallTau, BinaryInput<RandomAccessibleInterval<T>,RandomAccessibleInterval<U>>, BinaryOp<RandomAccessibleInterval<T>,RandomAccessibleInterval<U>,Double>, BinaryFunctionOp<RandomAccessibleInterval<T>,RandomAccessibleInterval<U>,Double>, NullaryFunctionOp<Double>, UnaryFunctionOp<RandomAccessibleInterval<T>,Double>, NullaryOp<Double>, Output<Double>, SpecialOp, UnaryInput<RandomAccessibleInterval<T>>, UnaryOp<RandomAccessibleInterval<T>,Double>, Threadable, Command, SciJavaPlugin
```
public class MTKT<T extends RealType<T>,U extends RealType<U>>
extends AbstractBinaryFunctionOp<RandomAccessibleInterval<T>,RandomAccessibleInterval<U>,Double>
implements Ops.Coloc.MaxTKendallTau, Contingent
```
This algorithm calculates Maximum Trunctated Kendall Tau (MTKT) from Wang et al. (2017); computes thresholds using Otsu method.

Author:

Ellen T Arena, Shulei Wang, Curtis Rueden

Nested Class Summary
- Nested classes/interfaces inherited from interface net.imagej.ops.special.SpecialOp
  SpecialOp.Flavor

Field Summary
- Fields inherited from interface net.imagej.ops.Ops.Coloc.MaxTKendallTau
  NAME

Constructor Summary

Constructors
Constructor and Description

MTKT()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`Double`	`calculate(RandomAccessibleInterval<T> image1, RandomAccessibleInterval<U> image2)` Calculates the output given two inputs.
`boolean`	`conforms()` True if the contingency holds; i.e., the current circumstances conform to the contingency's requirements.

Methods inherited from class net.imagej.ops.special.function.AbstractBinaryFunctionOp
in1, in2, out, run, setInput1, setInput2

Methods inherited from class net.imagej.ops.AbstractOp
ops, setEnvironment

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.lang.Runnable
run

Methods inherited from interface net.imagej.ops.Environmental
ops, setEnvironment

Methods inherited from interface net.imagej.ops.special.function.BinaryFunctionOp
calculate, getIndependentInstance, run

Methods inherited from interface net.imagej.ops.special.BinaryOp
getArity

Methods inherited from interface net.imagej.ops.special.BinaryInput
in, setInput

Methods inherited from interface net.imagej.ops.special.function.UnaryFunctionOp
calculate, run

Methods inherited from interface net.imagej.ops.special.function.NullaryFunctionOp
run

Methods inherited from interface net.imagej.ops.special.SpecialOp
candidates, filterArity, op

Methods inherited from interface net.imagej.ops.Initializable
initialize

- Constructor Detail
  - MTKT
```
public MTKT()
```
- Method Detail
  - calculate
```
public Double calculate(RandomAccessibleInterval<T> image1,
                        RandomAccessibleInterval<U> image2)
```
    Description copied from interface: BinaryFunctionOp
    
    Calculates the output given two inputs.
    
    Specified by:
    
    calculate in interface BinaryFunctionOp<RandomAccessibleInterval<T extends RealType<T>>,RandomAccessibleInterval<U extends RealType<U>>,Double>
    
    Parameters:
    
    image1 - first argument to the function
    
    image2 - second argument to the function
    
    Returns:
    
    output result of the function
  - conforms
```
public boolean conforms()
```
    Description copied from interface: Contingent
    
    True if the contingency holds; i.e., the current circumstances conform to the contingency's requirements.
    
    Specified by:
    
    conforms in interface Contingent

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