Options (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- vib.app.Options

```
public class Options
extends Object
```

Field Summary

Fields
Modifier and Type	Field and Description
`static int`	`CENTER`
`static String`	`CONFIG_FILE`
`FileGroup`	`fileGroup`
`static int`	`GREY`
`static int`	`LABEL_DIFFUSION`
`static int`	`LABEL_SURFACE`
`int`	`numChannels`
`int`	`refChannel`
`int`	`resamplingFactor`
`String`	`templatePath`
`static String[]`	`TRANSFORM_LABELS`
`int`	`transformationMethod`
`static String[]`	`TRANSFORMS`
`String`	`workingDirectory`

Constructor Summary

Constructors
Constructor and Description

Options()

Options(File dir)

Options(String dirname)

Constructors
Constructor and Description
`Options()`
`Options(File dir)`
`Options(String dirname)`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`Options`	`clone()`
`void`	`copy(Options options)`
`void`	`debug()`
`boolean`	`isTransformationValid(String method)`
`boolean`	`isValid()`
`void`	`loadFrom(String path)`
`static void`	`main(String[] args)`
`boolean`	`needsLabels()`
`static boolean`	`needsLabels(int method)`
`void`	`saveTo(String path)`
`void`	`setTransformationMethod(String method)`
`String`	`toString()`

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

CONFIG_FILE
```
public static final String CONFIG_FILE
```
See Also:

Constant Field Values

GREY
```
public static final int GREY
```
See Also:

Constant Field Values

LABEL_SURFACE
```
public static final int LABEL_SURFACE
```
See Also:

Constant Field Values

CENTER
```
public static final int CENTER
```
See Also:

Constant Field Values

LABEL_DIFFUSION
```
public static final int LABEL_DIFFUSION
```
See Also:

Constant Field Values

TRANSFORMS

public static final String[] TRANSFORMS

TRANSFORM_LABELS

public static final String[] TRANSFORM_LABELS

workingDirectory
```
public String workingDirectory
```

fileGroup
```
public FileGroup fileGroup
```

templatePath
```
public String templatePath
```

numChannels
```
public int numChannels
```

refChannel
```
public int refChannel
```

resamplingFactor
```
public int resamplingFactor
```

transformationMethod
```
public int transformationMethod
```

Constructor Detail

Options
```
public Options()
```

Options
```
public Options(String dirname)
```

Options
```
public Options(File dir)
```

Method Detail

setTransformationMethod

public void setTransformationMethod(String method)

needsLabels
```
public boolean needsLabels()
```

needsLabels

public static boolean needsLabels(int method)

isTransformationValid

public boolean isTransformationValid(String method)

isValid
```
public boolean isValid()
```

clone
```
public Options clone()
```
Overrides:

clone in class Object

copy
```
public void copy(Options options)
```

saveTo
```
public void saveTo(String path)
```

loadFrom
```
public void loadFrom(String path)
```

toString
```
public String toString()
```
Overrides:

toString in class Object

debug
```
public void debug()
```

main

public static void main(String[] args)

Class Options

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

CONFIG_FILE

GREY

LABEL_SURFACE

CENTER

LABEL_DIFFUSION

TRANSFORMS

TRANSFORM_LABELS

workingDirectory

fileGroup

templatePath

numChannels

refChannel

resamplingFactor

transformationMethod

Constructor Detail

Options

Options

Options

Method Detail

setTransformationMethod

needsLabels

needsLabels

isTransformationValid

isValid

clone

copy

saveTo

loadFrom

toString

debug

main