Constructor Detail

• PointList

  public PointList()

Method Detail

• add

  public void add(BenesNamedPoint point)

• add

  public void add(String name,
                  double x,
                  double y,
                  double z)

• add

  public void add(double x,
                  double y,
                  double z)

• remove

  public void remove(BenesNamedPoint point)

• remove

  public void remove(int i)

• clear

  public void clear()

• rename

  public void rename(BenesNamedPoint point,
                     String name)

• up

  public void up(BenesNamedPoint point)

• down

  public void down(BenesNamedPoint point)

• highlight

  public void highlight(BenesNamedPoint p)

• placePoint

  public void placePoint(BenesNamedPoint point,
                         double x,
                         double y,
                         double z)

• get

  public BenesNamedPoint get(int index)

• indexOf

  public int indexOf(BenesNamedPoint p)

• indexOfPointAt

  public int indexOfPointAt(double x,
                            double y,
                            double z,
                            double tol)

• pointAt

  public BenesNamedPoint pointAt(double x,
                                 double y,
                                 double z,
                                 double tol)

• toArray

  public BenesNamedPoint[] toArray()

• size

  public int size()

• get

  public BenesNamedPoint get(String name)

• iterator

  public Iterator<BenesNamedPoint> iterator()

  Specified by:

  iterator in interface Iterable<BenesNamedPoint>

• duplicate

  public PointList duplicate()

• fromMask

  public static PointList fromMask(ij.ImagePlus imp)

• load

  public static PointList load(ij.ImagePlus imp)

• load

  public static PointList load(String dir,
                               String file,
                               boolean showDialog)

• load

  public static PointList load(Reader reader)
                        throws IOException

  Throws:

  IOException

• parseString

  public static PointList parseString(String fileContents)
                               throws IOException

  Throws:

  IOException

• save

  public void save(String directory,
                   String fileName)

• save

  public void save(PrintStream fos,
                   boolean close)
            throws IOException

  Throws:

  IOException

• pointsInBothAsString

  public static ArrayList<String> pointsInBothAsString(PointList points0,
                                                       PointList points1)

• pointsInBoth

  public static PointList pointsInBoth(PointList points0,
                                       PointList points1)

• print

  public void print()

• addPointListListener

  public void addPointListListener(PointList.PointListListener pll)

• removePointListListener

  public void removePointListListener(PointList.PointListListener pll)