Histogram_2D (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- util.Histogram_2D

All Implemented Interfaces:: ij.plugin.PlugIn

public class Histogram_2D
extends Object
implements ij.plugin.PlugIn

Nested Class Summary

Nested Classes
Modifier and Type Class and Description

class Histogram_2D.HistogramOptionsDialog

class Histogram_2D.Statistics

Nested Classes
Modifier and Type	Class and Description
`class`	`Histogram_2D.HistogramOptionsDialog`
`class`	`Histogram_2D.Statistics`

Field Summary

Fields
Modifier and Type	Field and Description
`static int`	`CHANNELS`
`static int`	`FRAMES`
`static int`	`HEIGHT`
`static int`	`LOG_PROBABILITIES`
`static int`	`PROBABILITIES`
`static int`	`SELF_INFORMATION`
`static int`	`SLICES`
`static int`	`WIDTH`

Constructor Summary

Constructors
Constructor and Description

Histogram_2D()

Constructors
Constructor and Description
`Histogram_2D()`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`boolean`	`addImagePlusPair(ij.ImagePlus imageA, ij.ImagePlus imageB)`
`boolean`	`addImagePlusPair(ij.ImagePlus imageA, ij.ImagePlus imageB, double minimumA, double maximumA, double minimumB, double maximumB, int binsA, int binsB)`
`boolean`	`addImagePlusPair(ij.ImagePlus imageA, ij.ImagePlus imageB, int bins)`
`boolean`	`allowedBitDepth(int bitDepth)`
`ij.ImagePlus`	`frame2DHistogram(String title, ij.ImagePlus histogram, String xLabel, double xmin, double xmax, String yLabel, double ymin, double ymax, int method, Histogram_2D.Statistics statistics)`
`ij.ImagePlus[]`	`getHistogramImages()`
`double[]`	`getMinimumThresholdsForCorrelation(Histogram_2D.Statistics overall)`
`Histogram_2D.Statistics`	`getStatistics(double minimumXThreshold, double maximumXThreshold, double minimumYThreshold, double maximumYThreshold)`
`void`	`run(String ignored)`
`protected void`	`start2DHistogram(double minValueA, double maxValueA, double minValueB, double maxValueB, int binsA, int binsB)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail
- WIDTH
```
public static final int WIDTH
```
  See Also:
  
  Constant Field Values
- HEIGHT
```
public static final int HEIGHT
```
  See Also:
  
  Constant Field Values
- CHANNELS
```
public static final int CHANNELS
```
  See Also:
  
  Constant Field Values
- SLICES
```
public static final int SLICES
```
  See Also:
  
  Constant Field Values
- FRAMES
```
public static final int FRAMES
```
  See Also:
  
  Constant Field Values
- PROBABILITIES
```
public static final int PROBABILITIES
```
  See Also:
  
  Constant Field Values
- LOG_PROBABILITIES
```
public static final int LOG_PROBABILITIES
```
  See Also:
  
  Constant Field Values
- SELF_INFORMATION
```
public static final int SELF_INFORMATION
```
  See Also:
  
  Constant Field Values

Constructor Detail
- Histogram_2D
```
public Histogram_2D()
```

Method Detail

getStatistics

public Histogram_2D.Statistics getStatistics(double minimumXThreshold,
                                             double maximumXThreshold,
                                             double minimumYThreshold,
                                             double maximumYThreshold)

getMinimumThresholdsForCorrelation

public double[] getMinimumThresholdsForCorrelation(Histogram_2D.Statistics overall)

start2DHistogram

protected void start2DHistogram(double minValueA,
                                double maxValueA,
                                double minValueB,
                                double maxValueB,
                                int binsA,
                                int binsB)

allowedBitDepth

public boolean allowedBitDepth(int bitDepth)

addImagePlusPair

public boolean addImagePlusPair(ij.ImagePlus imageA,
                                ij.ImagePlus imageB)

addImagePlusPair

public boolean addImagePlusPair(ij.ImagePlus imageA,
                                ij.ImagePlus imageB,
                                int bins)

addImagePlusPair

public boolean addImagePlusPair(ij.ImagePlus imageA,
                                ij.ImagePlus imageB,
                                double minimumA,
                                double maximumA,
                                double minimumB,
                                double maximumB,
                                int binsA,
                                int binsB)

getHistogramImages

public ij.ImagePlus[] getHistogramImages()

frame2DHistogram

public ij.ImagePlus frame2DHistogram(String title,
                                     ij.ImagePlus histogram,
                                     String xLabel,
                                     double xmin,
                                     double xmax,
                                     String yLabel,
                                     double ymin,
                                     double ymax,
                                     int method,
                                     Histogram_2D.Statistics statistics)

run
```
public void run(String ignored)
```
Specified by:

run in interface ij.plugin.PlugIn

Class Histogram_2D

Nested Class Summary

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

WIDTH

HEIGHT

CHANNELS

SLICES

FRAMES

PROBABILITIES

LOG_PROBABILITIES

SELF_INFORMATION

Constructor Detail

Histogram_2D

Method Detail

getStatistics

getMinimumThresholdsForCorrelation

start2DHistogram

allowedBitDepth

addImagePlusPair

addImagePlusPair

addImagePlusPair

getHistogramImages

frame2DHistogram

run