SPIMVirtualStack (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- ij.ImageStack
- - spimopener.SPIMStack
  - - spimopener.SPIMVirtualStack

public class SPIMVirtualStack
extends SPIMStack

Field Summary

Fields
Modifier and Type Field and Description

protected List<String> paths

Fields
Modifier and Type	Field and Description
`protected List<String>`	`paths`

Constructor Summary

Constructors
Constructor and Description

SPIMVirtualStack(int w, int h)
Creates a new, empty virtual stack.

Constructors
Constructor and Description
`SPIMVirtualStack(int w, int h)` Creates a new, empty virtual stack.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`addSlice(ij.process.ImageProcessor ip)`
`void`	`addSlice(String path)` Adds an image to the end of the stack.
`void`	`addSlice(String sliceLabel, ij.process.ImageProcessor ip)` Does nothing..
`void`	`addSlice(String sliceLabel, ij.process.ImageProcessor ip, int n)` Does noting.
`void`	`addSlice(String sliceLabel, Object pixels)` Does nothing.
`void`	`deleteLastSlice()` Deletes the last slice in the stack.
`void`	`deleteSlice(int n)` Deletes the specified slice, were 1<=n<=nslices.
`Object[]`	`getImageArray()` Returns null.
`Object`	`getPixels(int n)` Returns the pixel array for the specified slice, were 1<=n<=nslices.
`ij.process.ImageProcessor`	`getProcessor(int n)` Returns an ImageProcessor for the specified slice, were 1<=n<=nslices.
`int`	`getSize()` Returns the number of slices in this stack.
`String`	`getSliceLabel(int n)` Returns the label of the Nth image.
`boolean`	`isVirtual()` Always return true.
`int`	`saveChanges(int n)` Currently not implemented
`void`	`setPixels(Object pixels, int n)` Assigns a pixel array to the specified slice, were 1<=n<=nslices.
`void`	`setRange(int orgW, int orgH, int xOffs, int yOffs)`
`void`	`setSliceLabel(String label, int n)` Does nothing.
`void`	`trim()` Does nothing.

Methods inherited from class ij.ImageStack
addUnsignedShortSlice, convertToFloat, create, create, crop, drawSphere, duplicate, getBitDepth, getColorModel, getHeight, getRoi, getShortSliceLabel, getSliceLabels, getVoxel, getVoxels, getVoxels, getWidth, isHSB, isHSB32, isLab, isRGB, setBitDepth, setColorModel, setProcessor, setRoi, setVoxel, setVoxels, setVoxels, size, toString, update

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Field Detail
  - paths
```
protected List<String> paths
```
- Constructor Detail
  - SPIMVirtualStack
```
public SPIMVirtualStack(int w,
                        int h)
```
    Creates a new, empty virtual stack.
- Method Detail
  - setRange
```
public void setRange(int orgW,
                     int orgH,
                     int xOffs,
                     int yOffs)
```
    Specified by:
    
    setRange in class SPIMStack
  - addSlice
```
public void addSlice(String path)
```
    Adds an image to the end of the stack.
    
    Specified by:
    
    addSlice in class SPIMStack
  - addSlice
```
public void addSlice(ij.process.ImageProcessor ip)
```
    Specified by:
    
    addSlice in class SPIMStack
  - addSlice
```
public void addSlice(String sliceLabel,
                     Object pixels)
```
    Does nothing.
    
    Overrides:
    
    addSlice in class ij.ImageStack
  - addSlice
```
public void addSlice(String sliceLabel,
                     ij.process.ImageProcessor ip)
```
    Does nothing..
    
    Overrides:
    
    addSlice in class ij.ImageStack
  - addSlice
```
public void addSlice(String sliceLabel,
                     ij.process.ImageProcessor ip,
                     int n)
```
    Does noting.
    
    Overrides:
    
    addSlice in class ij.ImageStack
  - deleteSlice
```
public void deleteSlice(int n)
```
    Deletes the specified slice, were 1<=n<=nslices.
    
    Overrides:
    
    deleteSlice in class ij.ImageStack
  - deleteLastSlice
```
public void deleteLastSlice()
```
    Deletes the last slice in the stack.
    
    Overrides:
    
    deleteLastSlice in class ij.ImageStack
  - getPixels
```
public Object getPixels(int n)
```
    Returns the pixel array for the specified slice, were 1<=n<=nslices.
    
    Overrides:
    
    getPixels in class ij.ImageStack
  - setPixels
```
public void setPixels(Object pixels,
                      int n)
```
    Assigns a pixel array to the specified slice, were 1<=n<=nslices.
    
    Overrides:
    
    setPixels in class ij.ImageStack
  - getProcessor
```
public ij.process.ImageProcessor getProcessor(int n)
```
    Returns an ImageProcessor for the specified slice, were 1<=n<=nslices. Returns null if the stack is empty.
    
    Overrides:
    
    getProcessor in class ij.ImageStack
  - saveChanges
```
public int saveChanges(int n)
```
    Currently not implemented
  - getSize
```
public int getSize()
```
    Returns the number of slices in this stack.
    
    Overrides:
    
    getSize in class ij.ImageStack
  - getSliceLabel
```
public String getSliceLabel(int n)
```
    Returns the label of the Nth image.
    
    Overrides:
    
    getSliceLabel in class ij.ImageStack
  - getImageArray
```
public Object[] getImageArray()
```
    Returns null.
    
    Overrides:
    
    getImageArray in class ij.ImageStack
  - setSliceLabel
```
public void setSliceLabel(String label,
                          int n)
```
    Does nothing.
    
    Overrides:
    
    setSliceLabel in class ij.ImageStack
  - isVirtual
```
public boolean isVirtual()
```
    Always return true.
    
    Overrides:
    
    isVirtual in class ij.ImageStack
  - trim
```
public void trim()
```
    Does nothing.
    
    Overrides:
    
    trim in class ij.ImageStack

Class SPIMVirtualStack

Field Summary

Constructor Summary

Method Summary

Methods inherited from class ij.ImageStack

Methods inherited from class java.lang.Object

Field Detail

paths

Constructor Detail

SPIMVirtualStack

Method Detail

setRange

addSlice

addSlice

addSlice

addSlice

addSlice

deleteSlice

deleteLastSlice

getPixels

setPixels

getProcessor

saveChanges

getSize

getSliceLabel

getImageArray

setSliceLabel

isVirtual

trim