ComputeSecondaryImg (Fiji Javadocs 0-SNAPSHOT API)

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java.lang.Object
- org.scijava.module.AbstractModule
- - org.scijava.module.DefaultMutableModule
  - - org.scijava.command.DynamicCommand
    - - sc.fiji.snt.gui.cmds.CommonDynamicCmd
      - sc.fiji.snt.gui.cmds.ComputeSecondaryImg<T,U>

All Implemented Interfaces:

Runnable, Cancelable, Command, Interactive, Contextual, Module, MutableModule, SciJavaPlugin, SigmaPaletteListener
```
public class ComputeSecondaryImg<T extends RealType<T> & NativeType<T>,U extends RealType<U> & NativeType<U>>
extends CommonDynamicCmd
implements Interactive, SigmaPaletteListener
```
Implements the "Generate Secondary Layer" command.

Author:

Tiago Ferreira, Cameron Arshadi

Field Summary
- Fields inherited from class sc.fiji.snt.gui.cmds.CommonDynamicCmd
  EMPTY_LABEL, HEADER_HTML, snt, sntService, statusService, ui, uiService
- Fields inherited from class org.scijava.command.DynamicCommand
  moduleService, pluginService

Constructor Summary

Constructors
Constructor and Description

ComputeSecondaryImg()

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`protected void`	`error(String msg)`
`Window`	`getParent()`
`protected void`	`init()`
`static void`	`main(String[] args)`
`protected void`	`msg(String msg, String title)`
`void`	`paletteDismissed()`
`void`	`paletteDisplayed()`
`protected void`	`resetUI(boolean validateDimensions)`
`void`	`run()`
`void`	`setSigmas(List<Double> list)`

Methods inherited from class sc.fiji.snt.gui.cmds.CommonDynamicCmd
cancel, cancel, init, notifyExternalDataLoaded, notifyLoadingEnd, notifyLoadingStart, resetUI, status

Methods inherited from class org.scijava.command.DynamicCommand
context, getCancelReason, getContext, getInfo, getInput, getOutput, isCanceled, saveInputs, setContext, setInput, setOutput, uncancel

Methods inherited from class org.scijava.module.AbstractModule
getDelegateObject, getInputs, getOutputs, initialize, isInputResolved, isOutputResolved, preview, resolveInput, resolveOutput, setInputs, setOutputs, unresolveInput, unresolveOutput

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.scijava.module.MutableModule
addInput, addInput, addOutput, addOutput, removeInput, removeOutput

Methods inherited from interface org.scijava.module.Module
getDelegateObject, getInputs, getOutputs, initialize, isInputResolved, isOutputResolved, isResolved, preview, resolveInput, resolveOutput, setInputs, setOutputs, setResolved, unresolveInput, unresolveOutput

- Constructor Detail
  - ComputeSecondaryImg
```
public ComputeSecondaryImg()
```
- Method Detail
  - init
```
protected void init()
```
  - run
```
public void run()
```
    Specified by:
    
    run in interface Runnable
    
    Specified by:
    
    run in interface MutableModule
    
    Overrides:
    
    run in class CommonDynamicCmd
  - resetUI
```
protected void resetUI(boolean validateDimensions)
```
    Overrides:
    
    resetUI in class CommonDynamicCmd
  - paletteDisplayed
```
public void paletteDisplayed()
```
    Specified by:
    
    paletteDisplayed in interface SigmaPaletteListener
  - paletteDismissed
```
public void paletteDismissed()
```
    Specified by:
    
    paletteDismissed in interface SigmaPaletteListener
  - getParent
```
public Window getParent()
```
    Specified by:
    
    getParent in interface SigmaPaletteListener
  - setSigmas
```
public void setSigmas(List<Double> list)
```
    Specified by:
    
    setSigmas in interface SigmaPaletteListener
  - msg
```
protected void msg(String msg,
                   String title)
```
    Overrides:
    
    msg in class CommonDynamicCmd
  - error
```
protected void error(String msg)
```
    Overrides:
    
    error in class CommonDynamicCmd
  - main
```
public static void main(String[] args)
```

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