IFT_ (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- process3d.IFT_

All Implemented Interfaces:: ij.plugin.filter.PlugInFilter

public class IFT_
extends Object
implements ij.plugin.filter.PlugInFilter

Nested Class Summary

Nested Classes
Modifier and Type Class and Description

static class IFT_.Cls

Nested Classes
Modifier and Type	Class and Description
`static class`	`IFT_.Cls`

Field Summary
- Fields inherited from interface ij.plugin.filter.PlugInFilter
  CONVERT_TO_FLOAT, DOES_16, DOES_32, DOES_8C, DOES_8G, DOES_ALL, DOES_RGB, DOES_STACKS, DONE, FINAL_PROCESSING, KEEP_THRESHOLD, NO_CHANGES, NO_IMAGE_REQUIRED, NO_UNDO, NO_UNDO_RESET, PARALLELIZE_IMAGES, PARALLELIZE_STACKS, ROI_REQUIRED, SNAPSHOT, STACK_REQUIRED, SUPPORTS_MASKING

Constructor Summary

Constructors
Constructor and Description

IFT_()

IFT_(ij.ImagePlus image)

Constructors
Constructor and Description
`IFT_()`
`IFT_(ij.ImagePlus image)`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`protected static void`	`addClass(List<IFT_.Cls> classlist, int x, int y, int z, byte value)`
`ij.ImagePlus`	`checkLabelfield(ij.ImagePlus labels)`
`ij.ImagePlus`	`createMeans()`
`ij.ImagePlus`	`createResult()`
`String`	`createSummaryString()`
`IFT_.Cls[]`	`getClasses()`
`void`	`getNeighbours(int index)`
`void`	`initFromImage(ij.ImagePlus seeds)`
`void`	`initFromMinima()`
`void`	`initFromPointList()`
`void`	`propagate()`
`static IFT_.Cls[]`	`readClasses(String path)`
`void`	`run(ij.process.ImageProcessor ip)`
`int`	`setup(String arg, ij.ImagePlus image)`
`int`	`weight(int n1, int n2)`
`static void`	`writeClasses(String path, IFT_.Cls[] classes)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

IFT_
```
public IFT_(ij.ImagePlus image)
```

IFT_
```
public IFT_()
```

Method Detail

run
```
public void run(ij.process.ImageProcessor ip)
```
Specified by:

run in interface ij.plugin.filter.PlugInFilter

initFromImage

public void initFromImage(ij.ImagePlus seeds)

initFromMinima
```
public void initFromMinima()
```

addClass

protected static void addClass(List<IFT_.Cls> classlist,
                               int x,
                               int y,
                               int z,
                               byte value)

initFromPointList
```
public void initFromPointList()
```

propagate
```
public void propagate()
```

createResult
```
public ij.ImagePlus createResult()
```

createMeans
```
public ij.ImagePlus createMeans()
```

createSummaryString
```
public String createSummaryString()
```

getClasses
```
public IFT_.Cls[] getClasses()
```

weight

public int weight(int n1,
                  int n2)

setup

public int setup(String arg,
                 ij.ImagePlus image)

Specified by:: setup in interface ij.plugin.filter.PlugInFilter

getNeighbours
```
public void getNeighbours(int index)
```

checkLabelfield

public ij.ImagePlus checkLabelfield(ij.ImagePlus labels)

writeClasses

public static void writeClasses(String path,
                                IFT_.Cls[] classes)
                         throws Exception

Throws:: Exception

readClasses

public static IFT_.Cls[] readClasses(String path)
                              throws Exception

Throws:: Exception

Class IFT_

Nested Class Summary

Field Summary

Fields inherited from interface ij.plugin.filter.PlugInFilter

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

IFT_

IFT_

Method Detail

run

initFromImage

initFromMinima

addClass

initFromPointList

propagate

createResult

createMeans

createSummaryString

getClasses

weight

setup

getNeighbours

checkLabelfield

writeClasses

readClasses