| Interface | Description |
|---|---|
| ImagePreprocessor |
Any class implementing this interface is suitable as an image preprocessor for a TrakEM2 project.
|
| Class | Description |
|---|---|
| BinaryInterpolation2D |
Given two binary images of the same dimensions,
generate an interpolated image that sits somewhere
in between, as specified by the weight.
|
| Blending |
Utility functions for blending images together, to remove contrast seams.
|
| ContrastEnhancerWrapper | |
| ContrastPlot |
Copied and modified from Wayne Rasband's ImageJ ContrastPlot inner class in
ij.plugin.frame.ContrastAdjuster class, in ImageJ 1.43h.
|
| FastIntegralImage |
Written following the code in ImgLib1's IntegralImage2 and ScaleAreaAveraging2d,
authored by Stephan Preibisch and Albert Cardona.
|
| FloatProcessorT2 | |
| IntegralHistogram2d |
An integral histogram for 2d images.
|
| LayerStack |
This class represents an entire LayerSet of Patch objects only, as it is presented read-only to ImageJ.
|
| LazyVirtualStack | |
| P | |
| PatchStack |
Assumed is all Patch instances in the array are of the same size,
live in consecutive layers of the same thickness.
|
| PhaseCorrelationCalculator | |
| Segmentation | |
| Segmentation.BlowCommander | |
| Segmentation.BlowRunner | |
| Segmentation.FastMarchingParam | |
| StitchingTEM |
Given:
- list of images
- grid width
- known percent overlap
This class will attempt to find the optimal montage,
by applying phase-correlation, and/or cross-correlation, and/or SIFT-based correlation) between neighboring images.
|
| StitchingTEM.PhaseCorrelationParam |
Phase correlation parameters class
|
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