Constructor Detail

• Graph_Cut

  public Graph_Cut()

Method Detail

• run

  public void run(String arg)

  Specified by:

  run in interface ij.plugin.PlugIn

• processSingleChannelImage

  public ij.ImagePlus processSingleChannelImage(ij.ImagePlus imp,
                                                ij.ImagePlus edge,
                                                float dataWeight,
                                                float pottsWeight,
                                                float edgeWeight)

  Processes a single channel image. The intensities of the image are interpreted as the probability of each pixel to belong to the foreground. The potts weight represents an isotropic edge weight.

  Parameters:

  imp - The image to process

  edge - An edge image that increases the likelihood for cuts between certain pixels (can be null).

  pottsWeight - Isotropic edge weights.

  edgeWeight - The influence of the edge image.

  Returns:

  A binary segmentation image

• processSingleChannelImage

  public void processSingleChannelImage(ij.ImagePlus imp,
                                        ij.ImagePlus edge,
                                        float dataWeight,
                                        float pottsWeight,
                                        float edgeWeight,
                                        ij.ImagePlus seg)

  Processes a single channel image. The intensities of the image are interpreted as the probability of each pixel to belong to the foreground. The potts weight represents an isotropic edge weight.

  Parameters:

  imp - The image to process

  edge - An edge image that increases the likelihood for cuts between certain pixels (can be null).

  pottsWeight - Isotropic edge weights.

  edgeWeight - The influence of the edge image.

  seg - A grayscale image to store the binary result.

• createSequenceImage

  public ij.ImagePlus createSequenceImage(ij.ImagePlus imp,
                                          ij.ImagePlus edge,
                                          float dataStart,
                                          float dataStop,
                                          float dataStep,
                                          float pottsWeight,
                                          float edgeWeight)

• batchProcessImages

  public void batchProcessImages()

  Apply graph cut to several images