EdgeFeatureCalculator (Fiji Javadocs 0-SNAPSHOT API)

Skip navigation links

All Classes

Summary:
Nested |
Field |
Constr |
Method

Detail:
Field |
Constr |
Method

java.lang.Object
- net.imglib2.algorithm.MultiThreadedAlgorithm
- - net.imglib2.algorithm.MultiThreadedBenchmarkAlgorithm
  - - fiji.plugin.trackmate.features.EdgeFeatureCalculator

All Implemented Interfaces:

Algorithm, Benchmark, MultiThreaded, Cancelable
```
public class EdgeFeatureCalculator
extends MultiThreadedBenchmarkAlgorithm
implements Cancelable
```
A class dedicated to centralizing the calculation of the numerical features of spots, through EdgeAnalyzers.

Author:

Jean-Yves Tinevez - 2013

Field Summary
- Fields inherited from class net.imglib2.algorithm.MultiThreadedBenchmarkAlgorithm
  processingTime
- Fields inherited from class net.imglib2.algorithm.MultiThreadedAlgorithm
  errorMessage, numThreads

Constructor Summary

Constructors
Constructor and Description

EdgeFeatureCalculator(Model model, Settings settings)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`cancel(String reason)`
`boolean`	`checkInput()`
`void`	`computeEdgesFeatures(Collection<org.jgrapht.graph.DefaultWeightedEdge> edges, boolean doLogIt)` Calculates all the edge features configured in the `Settings` object for the specified edges.
`String`	`getCancelReason()`
`boolean`	`isCanceled()`
`boolean`	`process()` Calculates the edge features configured in the `Settings` for all the edges of this model.

Methods inherited from class net.imglib2.algorithm.MultiThreadedBenchmarkAlgorithm
getProcessingTime

Methods inherited from class net.imglib2.algorithm.MultiThreadedAlgorithm
getErrorMessage, getNumThreads, setNumThreads, setNumThreads

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - EdgeFeatureCalculator
```
public EdgeFeatureCalculator(Model model,
                             Settings settings)
```
- Method Detail
  - checkInput
```
public boolean checkInput()
```
    Specified by:
    
    checkInput in interface Algorithm
  - process
```
public boolean process()
```
    Calculates the edge features configured in the Settings for all the edges of this model.
    
    Specified by:
    
    process in interface Algorithm
  - computeEdgesFeatures
```
public void computeEdgesFeatures(Collection<org.jgrapht.graph.DefaultWeightedEdge> edges,
                                 boolean doLogIt)
```
    Calculates all the edge features configured in the Settings object for the specified edges.
    
    Parameters:
    
    edges - the edges to compute.
    
    doLogIt - if true, the logger of the model will be notified of the calculation.
  - isCanceled
```
public boolean isCanceled()
```
    Specified by:
    
    isCanceled in interface Cancelable
  - cancel
```
public void cancel(String reason)
```
    Specified by:
    
    cancel in interface Cancelable
  - getCancelReason
```
public String getCancelReason()
```
    Specified by:
    
    getCancelReason in interface Cancelable

Skip navigation links

All Classes

Summary:
Nested |
Field |
Constr |
Method

Detail:
Field |
Constr |
Method

Copyright © 2015–2021 Fiji. All rights reserved.