TrackMatePlugIn (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- fiji.plugin.trackmate.TrackMatePlugIn

All Implemented Interfaces:

ij.plugin.PlugIn

Direct Known Subclasses:

ManualTrackingPlugIn, TrackMateRunner
```
public class TrackMatePlugIn
extends Object
implements ij.plugin.PlugIn
```

Constructor Summary

Constructors
Constructor and Description

TrackMatePlugIn()

Constructors
Constructor and Description
`TrackMatePlugIn()`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`protected DisplaySettings`	`createDisplaySettings()`
`protected Model`	`createModel(ij.ImagePlus imp)` Hook for subclassers: Creates the `Model` instance that will be used to store data in the `TrackMate` instance.
`protected WizardSequence`	`createSequence(TrackMate trackmate, SelectionModel selectionModel, DisplaySettings displaySettings)` Hook for subclassers: Will create and position the sequence that will be played by the wizard launched by this plugin.
`protected Settings`	`createSettings(ij.ImagePlus imp)` Hook for subclassers: Creates the `Settings` instance that will be used to tune the `TrackMate` instance.
`protected TrackMate`	`createTrackMate(Model model, Settings settings)` Hook for subclassers: Creates the TrackMate instance that will be controlled in the GUI.
`static void`	`main(String[] args)`
`void`	`run(String imagePath)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- TrackMatePlugIn
```
public TrackMatePlugIn()
```

Method Detail

run
```
public void run(String imagePath)
```
Specified by:

run in interface ij.plugin.PlugIn

createSequence

protected WizardSequence createSequence(TrackMate trackmate,
                                        SelectionModel selectionModel,
                                        DisplaySettings displaySettings)

Hook for subclassers:
Will create and position the sequence that will be played by the wizard launched by this plugin.

Parameters:: trackmate -; selectionModel -; displaySettings -
Returns:: a new sequence.

createModel
```
protected Model createModel(ij.ImagePlus imp)
```
Hook for subclassers:
Creates the Model instance that will be used to store data in the TrackMate instance.

Parameters:

imp -

Returns:

a new Model instance.

createSettings
```
protected Settings createSettings(ij.ImagePlus imp)
```
Hook for subclassers:
Creates the Settings instance that will be used to tune the TrackMate instance. It is initialized by default with values taken from the current ImagePlus.

Parameters:

imp - the ImagePlus to operate on.

Returns:

a new Settings instance.

createTrackMate

protected TrackMate createTrackMate(Model model,
                                    Settings settings)

Hook for subclassers:
Creates the TrackMate instance that will be controlled in the GUI.

Returns:: a new TrackMate instance.

createDisplaySettings

protected DisplaySettings createDisplaySettings()

main

public static void main(String[] args)
                 throws ClassNotFoundException,
                        InstantiationException,
                        IllegalAccessException,
                        UnsupportedLookAndFeelException

Throws:: ClassNotFoundException; InstantiationException; IllegalAccessException; UnsupportedLookAndFeelException

Class TrackMatePlugIn

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

TrackMatePlugIn

Method Detail

run

createSequence

createModel

createSettings

createTrackMate

createDisplaySettings

main