Field Detail

• RAW

  public final int RAW

  See Also:

  Constant Field Values

• RLE

  public final int RLE

  See Also:

  Constant Field Values

• ZLIB

  public final int ZLIB

  See Also:

  Constant Field Values

• ASCII

  public final int ASCII

  See Also:

  Constant Field Values

• parameters

  public AmiraParameters parameters

Constructor Detail

• AmiraMeshDecoder

  public AmiraMeshDecoder()

Method Detail

• AmiraMeshDecoder

  public void AmiraMeshDecoder()

• open

  public boolean open(String fileName)

• readRLE

  public int readRLE(byte[] pixels,
                     int offset,
                     int length)
              throws IOException

  Throws:

  IOException

• readZlib

  public int readZlib(byte[] pixels,
                      int offset,
                      int length)
               throws IOException

  Throws:

  IOException

• getStack

  public ij.ImageStack getStack()

  Get AmiraMesh data as a stack. This method reads the slices one by one, so it is slower than getStackFast but uses less memory. Important: the file and output stream are closed after reading.

  Returns:

  image info a stack

• getStackFast

  public ij.ImageStack getStackFast()

  Get AmiraMesh data as a stack in a fast way, at a cost of reading the whole image information at once. It requires more memory than getStack but it is much faster. Important: the file and output stream are closed after reading.

  Returns:

  image info as stack or null if error

• isTable

  public boolean isTable()

• getTable

  public AmiraTable getTable()