mpicbg.imglib.algorithm.scalespace

Class DifferenceOfGaussianPeak<T extends NumericType<T>>

java.lang.Object

mpicbg.imglib.algorithm.scalespace.DifferenceOfGaussianPeak<T>

All Implemented Interfaces:

Leaf<DifferenceOfGaussianPeak<T>>, Node<DifferenceOfGaussianPeak<T>>, Iterable, Localizable

public class DifferenceOfGaussianPeak<T extends NumericType<T>>
extends Object
implements Localizable, Leaf<DifferenceOfGaussianPeak<T>>

TODO

Author:

Stephan Preibisch

Field Summary

Fields

Modifier and Type	Field and Description
protected T	fitValue
protected int[]	pixelLocation
protected float[]	subPixelLocationOffset
protected T	sumValue
protected T	value

Constructor Summary

Constructors

Constructor and Description
DifferenceOfGaussianPeak(int[] pixelLocation, T value, DifferenceOfGaussian.SpecialPoint specialPoint)

Method Summary

Modifier and Type	Method and Description
DifferenceOfGaussianPeak<T>	copy()
DifferenceOfGaussianPeak<T>[]	createArray(int n)
float	distanceTo(DifferenceOfGaussianPeak<T> other)
void	fwd()
void	fwd(long steps)
float	get(int k)
DifferenceOfGaussianPeak<T>	getEntry()
String	getErrorMessage()
T	getFitValue()
T	getImgValue()
int	getNumDimensions()
DifferenceOfGaussian.SpecialPoint	getPeakType()
int[]	getPosition() Return a copy of the current position.
int	getPosition(int dim) Return the current position in a given dimension.
void	getPosition(int[] position) Write the current position into the passed array.
String	getPositionAsString() Create a human-readable String representation of the current position.
float[]	getSubPixelPosition()
void	getSubPixelPosition(float[] loc)
float	getSubPixelPosition(int dim)
float[]	getSubPixelPositionOffset()
float	getSubPixelPositionOffset(int dim)
T	getValue()
boolean	isLeaf()
boolean	isMax()
boolean	isMin()
boolean	isValid()
void	setErrorMessage(String errorMessage)
void	setFitValue(T value)
void	setImgValue(T value)
void	setPeakType(DifferenceOfGaussian.SpecialPoint specialPoint)
void	setPixelLocation(int[] pixelLocation)
void	setPixelLocation(int location, int dim)
void	setSubPixelLocationOffset(float[] subPixelLocationOffset)
void	setSubPixelLocationOffset(float subPixelLocationOffset, int dim)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

pixelLocation

protected final int[] pixelLocation

subPixelLocationOffset

protected final float[] subPixelLocationOffset

value

protected final T extends NumericType<T> value

fitValue

protected final T extends NumericType<T> fitValue

sumValue

protected final T extends NumericType<T> sumValue

Constructor Detail

DifferenceOfGaussianPeak

public DifferenceOfGaussianPeak(int[] pixelLocation,
                                T value,
                                DifferenceOfGaussian.SpecialPoint specialPoint)

Method Detail

copy

public DifferenceOfGaussianPeak<T> copy()

isMin

public boolean isMin()

isMax

public boolean isMax()

isValid

public boolean isValid()

getPeakType

public DifferenceOfGaussian.SpecialPoint getPeakType()

getSubPixelPositionOffset

public float[] getSubPixelPositionOffset()

getSubPixelPositionOffset

public float getSubPixelPositionOffset(int dim)

getSubPixelPosition

public float[] getSubPixelPosition()

getSubPixelPosition

public void getSubPixelPosition(float[] loc)

getSubPixelPosition

public float getSubPixelPosition(int dim)

getValue

public T getValue()

getImgValue

public T getImgValue()

getFitValue

public T getFitValue()

getErrorMessage

public String getErrorMessage()

setPeakType

public void setPeakType(DifferenceOfGaussian.SpecialPoint specialPoint)

setSubPixelLocationOffset

public void setSubPixelLocationOffset(float subPixelLocationOffset,
                                      int dim)

setSubPixelLocationOffset

public void setSubPixelLocationOffset(float[] subPixelLocationOffset)

setPixelLocation

public void setPixelLocation(int location,
                             int dim)

setPixelLocation

public void setPixelLocation(int[] pixelLocation)

setImgValue

public void setImgValue(T value)

setFitValue

public void setFitValue(T value)

setErrorMessage

public void setErrorMessage(String errorMessage)

getPosition

public void getPosition(int[] position)

Description copied from interface: Localizable

Write the current position into the passed array.

Specified by:

getPosition in interface Localizable

getPosition

public int[] getPosition()

Description copied from interface: Localizable

Return a copy of the current position.

Specified by:

getPosition in interface Localizable

Returns:

getPosition

public int getPosition(int dim)

Description copied from interface: Localizable

Return the current position in a given dimension.

Specified by:

getPosition in interface Localizable

Returns:

getPositionAsString

public String getPositionAsString()

Description copied from interface: Localizable

Create a human-readable String representation of the current position.

Specified by:

getPositionAsString in interface Localizable

Returns:

fwd

public void fwd(long steps)

Specified by:

fwd in interface Iterable

fwd

public void fwd()

Specified by:

fwd in interface Iterable

isLeaf

public boolean isLeaf()

Specified by:

isLeaf in interface Node<DifferenceOfGaussianPeak<T extends NumericType<T>>>

get

public float get(int k)

Specified by:

get in interface Leaf<DifferenceOfGaussianPeak<T extends NumericType<T>>>

distanceTo

public float distanceTo(DifferenceOfGaussianPeak<T> other)

Specified by:

distanceTo in interface Leaf<DifferenceOfGaussianPeak<T extends NumericType<T>>>

getNumDimensions

public int getNumDimensions()

Specified by:

getNumDimensions in interface Leaf<DifferenceOfGaussianPeak<T extends NumericType<T>>>

createArray

public DifferenceOfGaussianPeak<T>[] createArray(int n)

Specified by:

createArray in interface Leaf<DifferenceOfGaussianPeak<T extends NumericType<T>>>

getEntry

public DifferenceOfGaussianPeak<T> getEntry()

Specified by:

getEntry in interface Leaf<DifferenceOfGaussianPeak<T extends NumericType<T>>>