bvv.core.blocks

Class GridDataAccessImp.Cells<T,A extends net.imglib2.img.basictypeaccess.array.ArrayDataAccess<?>>

java.lang.Object

bvv.core.blocks.GridDataAccessImp.Cells<T,A>

Type Parameters:

T - primitive array type of cell data, e.g. short[].

All Implemented Interfaces:

GridDataAccess<T>

Enclosing class:

GridDataAccessImp

public static class GridDataAccessImp.Cells<T,A extends net.imglib2.img.basictypeaccess.array.ArrayDataAccess<?>>
extends Object

Access to primitive data of Cells in a CellImg.

Constructor Summary

Constructors

Constructor and Description
Cells(net.imglib2.img.cell.AbstractCellImg<?,A,? extends net.imglib2.img.cell.Cell<A>,?> cellImg)

Method Summary

Modifier and Type	Method and Description
int	cellSize(int d) Get the size of a standard cell in dimension d.
int	cellSize(int d, int cellGridPosition) From the position of a cell in the grid, compute the size of the cell in dimension d.
void	fwd(int d)
T	get() Get the primitive array with data of grid cell at current position.
int[]	getPosition()
int	imgSize(int d) Get the image size in dimension d in pixels.
void	setPosition(int[] position)
void	setPosition(int position, int d)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Cells

public Cells(net.imglib2.img.cell.AbstractCellImg<?,A,? extends net.imglib2.img.cell.Cell<A>,?> cellImg)

Method Detail

get

public T get()

Description copied from interface: GridDataAccess

Get the primitive array with data of grid cell at current position.

Returns:

data at current position, or null if data is not valid.

fwd

public void fwd(int d)

Specified by:

fwd in interface GridDataAccess<T>

setPosition

public void setPosition(int position,
                        int d)

Specified by:

setPosition in interface GridDataAccess<T>

setPosition

public void setPosition(int[] position)

Specified by:

setPosition in interface GridDataAccess<T>

getPosition

public int[] getPosition()

Specified by:

getPosition in interface GridDataAccess<T>

cellSize

public int cellSize(int d)

Description copied from interface: GridDataAccess

Get the size of a standard cell in dimension d. Cells on the max border of the image may be truncated and may therefore have different size.

Specified by:

cellSize in interface GridDataAccess<T>

Parameters:

d - dimension index

cellSize

public int cellSize(int d,
                    int cellGridPosition)

Description copied from interface: GridDataAccess

From the position of a cell in the grid, compute the size of the cell in dimension d. The size will be the standard cell size, unless the cell is at the border of the image, in which case it might be truncated.

Specified by:

cellSize in interface GridDataAccess<T>

Parameters:

d - dimension index

cellGridPosition - grid coordinates of the cell in dimension d.

Returns:

size of the cell in dimension d.

imgSize

public int imgSize(int d)

Description copied from interface: GridDataAccess

Get the image size in dimension d in pixels. Note, that this is the number of pixels in all cells combined, not the number of cells!

Specified by:

imgSize in interface GridDataAccess<T>

Parameters:

d - dimension index