Uses of Class
bdv.img.hdf5.Partition

Packages that use Partition

Package	Description
bdv.export
bdv.img.hdf5
bdv.spimdata.tools

Uses of Partition in bdv.export

Methods in bdv.export with parameters of type Partition

Modifier and Type	Method	Description
static void	WriteSequenceToHdf5.writeHdf5PartitionFile(mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> seq, Map<Integer,ExportMipmapInfo> perSetupMipmapInfo, boolean deflate, Partition partition, ExportScalePyramid.LoopbackHeuristic loopbackHeuristic, ExportScalePyramid.AfterEachPlane afterEachPlane, int numCellCreatorThreads, ProgressWriter progressWriter)	Create a hdf5 partition file containing image data for a subset of views and timepoints in a chunked, mipmaped representation.
static void	WriteSequenceToHdf5.writeViewToHdf5PartitionFile(net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.integer.UnsignedShortType> img, Partition partition, int timepointIdPartition, int setupIdPartition, ExportMipmapInfo mipmapInfo, boolean writeMipmapInfo, boolean deflate, ExportScalePyramid.LoopbackHeuristic loopbackHeuristic, ExportScalePyramid.AfterEachPlane afterEachPlane, int numCellCreatorThreads, ProgressWriter progressWriter)	Deprecated.

Method parameters in bdv.export with type arguments of type Partition

Modifier and Type	Method	Description
static void	WriteSequenceToHdf5.writeHdf5PartitionLinkFile(mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> seq, Map<Integer,ExportMipmapInfo> perSetupMipmapInfo, ArrayList<Partition> partitions, File hdf5File)	Create a hdf5 master file linking to image data from all views and all timepoints.

Uses of Partition in bdv.img.hdf5

Methods in bdv.img.hdf5 that return types with arguments of type Partition

Modifier and Type	Method	Description
ArrayList<Partition>	Hdf5ImageLoader.getPartitions()
static ArrayList<Partition>	Partition.split(List<mpicbg.spim.data.sequence.TimePoint> timepoints, List<? extends mpicbg.spim.data.generic.sequence.BasicViewSetup> setups, int timepointsPerPartition, int setupsPerPartition, String basename)	Split a sequence into partitions, each containing a specified number of timepoints and setups.

Constructor parameters in bdv.img.hdf5 with type arguments of type Partition

Constructor	Description
Hdf5ImageLoader(File hdf5File, ch.systemsx.cisd.hdf5.IHDF5Reader existingHdf5Reader, ArrayList<Partition> hdf5Partitions, mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> sequenceDescription, boolean doOpen)
Hdf5ImageLoader(File hdf5File, ArrayList<Partition> hdf5Partitions, mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> sequenceDescription)
Hdf5ImageLoader(File hdf5File, ArrayList<Partition> hdf5Partitions, mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> sequenceDescription, boolean doOpen)

Uses of Partition in bdv.spimdata.tools

Methods in bdv.spimdata.tools that return types with arguments of type Partition

Modifier and Type	Method	Description
static ArrayList<Partition>	MergePartitionList.getMergedHdf5PartitionList(mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> seq1, mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> seq2)
static ArrayList<Partition>	MergePartitionList.getPartitions(mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> seq)	Get the Partition list for the Hdf5ImageLoader of the specified AbstractSequenceDescription.