util

Class CMTKTransformation

java.lang.Object

util.CMTKTransformation

public class CMTKTransformation
extends Object

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	CMTKTransformation.Inverse

Constructor Summary

Constructors

Modifier	Constructor and Description
	CMTKTransformation()
protected	CMTKTransformation(int dimsx, int dimsy, int dimsz, double domainx, double domainy, double domainz, double originx, double originy, double originz, double[][] coeffs)

Method Summary

Modifier and Type	Method and Description
double	bSpline(int l, double u)
static double	degToRad(double d)
CMTKTransformation.Inverse	inverse(ImagePlus template, ImagePlus model)
static FastMatrix	parseTypedStreamAffine(File f)
static CMTKTransformation	parseTypedStreamWarp(File f)
boolean	precalculatedInverseExists()
void	setOriginalFile(File originalFile)
ImagePlus	transform(ImagePlus templateImage, ImagePlus modelImage)
void	transformPoint(double x, double y, double z, double[] result)
byte	trilinearInterpolateByte(double image_x, double image_y, double image_z, int width, int height, int depth, byte[][] v)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CMTKTransformation

public CMTKTransformation()

CMTKTransformation

protected CMTKTransformation(int dimsx,
                             int dimsy,
                             int dimsz,
                             double domainx,
                             double domainy,
                             double domainz,
                             double originx,
                             double originy,
                             double originz,
                             double[][] coeffs)

Method Detail

setOriginalFile

public void setOriginalFile(File originalFile)

degToRad

public static double degToRad(double d)

trilinearInterpolateByte

public byte trilinearInterpolateByte(double image_x,
                                     double image_y,
                                     double image_z,
                                     int width,
                                     int height,
                                     int depth,
                                     byte[][] v)

transform

public ImagePlus transform(ImagePlus templateImage,
                           ImagePlus modelImage)

bSpline

public double bSpline(int l,
                      double u)

transformPoint

public void transformPoint(double x,
                           double y,
                           double z,
                           double[] result)

parseTypedStreamAffine

public static FastMatrix parseTypedStreamAffine(File f)

parseTypedStreamWarp

public static CMTKTransformation parseTypedStreamWarp(File f)

precalculatedInverseExists

public boolean precalculatedInverseExists()

inverse

public CMTKTransformation.Inverse inverse(ImagePlus template,
                                          ImagePlus model)