Module sc.fiji.filamentdetector

Package sc.fiji.filamentdetector.overlay

Interface FilamentOverlayService

All Superinterfaces:

Comparable<org.scijava.Prioritized>, org.scijava.Contextual, org.scijava.Disposable, org.scijava.plugin.HasPluginInfo, org.scijava.Identifiable, net.imagej.ImageJService, org.scijava.Initializable, org.scijava.Locatable, org.scijava.log.Logged, org.scijava.Prioritized, org.scijava.plugin.RichPlugin, org.scijava.plugin.SciJavaPlugin, org.scijava.service.Service, org.scijava.Versioned

All Known Implementing Classes:

DefaultFilamentOverlayService

public interface FilamentOverlayService
extends net.imagej.ImageJService

Method Summary

Modifier and Type	Method	Description
void	add(Filament filament)
void	add(Filaments filaments)
void	add(TrackedFilament trackedFilament)
void	add(TrackedFilaments trackedFilaments)
void	autoScaleImage()
void	clearSelection()
void	disableOverlay(boolean disable)
void	exportToROIManager()
int	getColorAlpha()
int	getFilamentWidth()
net.imagej.display.ImageDisplay	getImageDisplay()
int	getTipDiameter()
boolean	isDrawBoundingBoxes()
boolean	isDrawMinusTips()
boolean	isDrawPlusTips()
void	refresh()
void	remove(Filament filament)
void	remove(Filaments filaments)
void	remove(TrackedFilament trackedFilament)
void	remove(TrackedFilaments trackedFilaments)
void	reset()
void	setColorAlpha(int colorAlpha)
void	setDrawBoundingBoxes(boolean drawBoundingBoxes)
void	setDrawMinusTips(boolean drawMinusTips)
void	setDrawPlusTips(boolean drawPlusTips)
void	setFilamentWidth(int filamentWidth)
void	setImageDisplay(net.imagej.display.ImageDisplay imageDisplay)
void	setSelected(Filament filament, boolean moveToFrame, boolean clearSelection)
void	setSelected(TrackedFilament trackedFilament, boolean moveToFrame, boolean clearSelection)
void	setTipDiameter(int tipDiameter)
void	setViewMode(ImageDisplayMode viewMode)
void	updateLineWidth()
void	updateTransparency()

Methods inherited from interface org.scijava.Contextual

context, getContext, setContext

Methods inherited from interface org.scijava.Disposable

dispose

Methods inherited from interface org.scijava.plugin.HasPluginInfo

getInfo, setInfo

Methods inherited from interface org.scijava.Locatable

getLocation

Methods inherited from interface org.scijava.Prioritized

compareTo, getPriority, setPriority

Methods inherited from interface org.scijava.plugin.RichPlugin

getIdentifier, log

Methods inherited from interface org.scijava.service.Service

initialize, registerEventHandlers

Methods inherited from interface org.scijava.Versioned

getVersion

Method Detail

add

void add(Filament filament)

add

void add(Filaments filaments)

add

void add(TrackedFilament trackedFilament)

add

void add(TrackedFilaments trackedFilaments)

clearSelection

void clearSelection()

disableOverlay

void disableOverlay(boolean disable)

exportToROIManager

void exportToROIManager()

getColorAlpha

int getColorAlpha()

getFilamentWidth

int getFilamentWidth()

getImageDisplay

net.imagej.display.ImageDisplay getImageDisplay()

refresh

void refresh()

remove

void remove(Filament filament)

remove

void remove(Filaments filaments)

remove

void remove(TrackedFilament trackedFilament)

remove

void remove(TrackedFilaments trackedFilaments)

reset

void reset()

setColorAlpha

void setColorAlpha(int colorAlpha)

setFilamentWidth

void setFilamentWidth(int filamentWidth)

setImageDisplay

void setImageDisplay(net.imagej.display.ImageDisplay imageDisplay)

setSelected

void setSelected(Filament filament,
                 boolean moveToFrame,
                 boolean clearSelection)

setSelected

void setSelected(TrackedFilament trackedFilament,
                 boolean moveToFrame,
                 boolean clearSelection)

isDrawBoundingBoxes

boolean isDrawBoundingBoxes()

setDrawBoundingBoxes

void setDrawBoundingBoxes(boolean drawBoundingBoxes)

isDrawPlusTips

boolean isDrawPlusTips()

isDrawMinusTips

boolean isDrawMinusTips()

setDrawPlusTips

void setDrawPlusTips(boolean drawPlusTips)

setDrawMinusTips

void setDrawMinusTips(boolean drawMinusTips)

setTipDiameter

void setTipDiameter(int tipDiameter)

getTipDiameter

int getTipDiameter()

updateTransparency

void updateTransparency()

updateLineWidth

void updateLineWidth()

setViewMode

void setViewMode(ImageDisplayMode viewMode)

autoScaleImage

void autoScaleImage()