ij3d

Class ImageJ3DViewer

java.lang.Object

ij3d.ImageJ3DViewer

All Implemented Interfaces:

ij.plugin.PlugIn

public class ImageJ3DViewer
extends Object
implements ij.plugin.PlugIn

Constructor Summary

Constructors

Constructor and Description
ImageJ3DViewer()

Method Summary

Modifier and Type	Method and Description
static void	add(String image, String c, String name, String th, String r, String g, String b, String resamplingF, String type)
static void	addBox(String name, String lowerCorner, String upperCorner) Add a box into the current 3D universe
static void	addCone(String name, String from, String to, String radius) Add a cone into the current 3D universe
static void	addOrthoslice(String image, String c, String name, String r, String g, String b, String resamplingF)
static void	addSphere(String name, String center, String radius) Add a sphere into the current 3D universe
static void	addTubePoint(String point) Add a point to the list that will conform a tube into the current 3D universe
static void	addVolume(String image, String c, String name, String r, String g, String b, String resamplingF)
static void	applyTransform(String transform)
static void	close()
static void	delete()
static void	exportContent(String format, String path)
static void	exportTransformed()
static void	fillSelection()
static void	finishTube(String name, String radius, String point) Add a tube into the current 3D universe
static void	importContent(String path)
static void	lock()
static void	main(String[] args)
static void	record360()
static void	resetTransform()
static void	resetView()
void	run(String arg)
static void	saveTransform(String transform, String path)
static void	select(String name)
static void	setChannels(String red, String green, String blue)
static void	setColor(String red, String green, String blue)
static void	setCoordinateSystem(String s)
static void	setSlices(String x, String y, String z)
static void	setThreshold(String s)
static void	setTransform(String transform)
static void	setTransparency(String t)
static void	showContent(String name, String b)
static void	snapshot(String w, String h)
static void	startAnimate()
static void	startFreehandRecording()
static void	stopAnimate()
static void	stopFreehandRecording()
static void	unlock()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ImageJ3DViewer

public ImageJ3DViewer()

Method Detail

main

public static void main(String[] args)

run

public void run(String arg)

Specified by:

run in interface ij.plugin.PlugIn

resetView

public static void resetView()

startAnimate

public static void startAnimate()

stopAnimate

public static void stopAnimate()

record360

public static void record360()

startFreehandRecording

public static void startFreehandRecording()

stopFreehandRecording

public static void stopFreehandRecording()

close

public static void close()

select

public static void select(String name)

showContent

public static void showContent(String name,
                               String b)

add

public static void add(String image,
                       String c,
                       String name,
                       String th,
                       String r,
                       String g,
                       String b,
                       String resamplingF,
                       String type)

addVolume

public static void addVolume(String image,
                             String c,
                             String name,
                             String r,
                             String g,
                             String b,
                             String resamplingF)

addOrthoslice

public static void addOrthoslice(String image,
                                 String c,
                                 String name,
                                 String r,
                                 String g,
                                 String b,
                                 String resamplingF)

addSphere

public static void addSphere(String name,
                             String center,
                             String radius)

Add a sphere into the current 3D universe

Parameters:

name - content name for the sphere

center - string containing the center coordinates (Ex: "0,2.3,8.4")

radius - string containing the radius of the sphere

addBox

public static void addBox(String name,
                          String lowerCorner,
                          String upperCorner)

Add a box into the current 3D universe

Parameters:

name - content name for the box

lowerCorner - string containing the lower corner coordinates (Ex: "0,2.3,8.4")

upperCorner - string containing the upper corner coordinates (Ex: "10,12.3,18.4")

addCone

public static void addCone(String name,
                           String from,
                           String to,
                           String radius)

Add a cone into the current 3D universe

Parameters:

name - content name for the cone

from - string containing the initial coordinates (Ex: "0,2.3,8.4")

to - string containing the end coordinates (Ex: "10,12.3,18.4")

radius - string containing the radius of the cone

addTubePoint

public static void addTubePoint(String point)

Add a point to the list that will conform a tube into the current 3D universe

Parameters:

point - string containing tube point coordinates

finishTube

public static void finishTube(String name,
                              String radius,
                              String point)

Add a tube into the current 3D universe

Parameters:

name - content name for the tube

radius - string containing the radius of the tube

point - string containing the coordinates of the last point to add to the tube

delete

public static void delete()

snapshot

public static void snapshot(String w,
                            String h)

setSlices

public static void setSlices(String x,
                             String y,
                             String z)

fillSelection

public static void fillSelection()

lock

public static void lock()

unlock

public static void unlock()

setChannels

public static void setChannels(String red,
                               String green,
                               String blue)

setColor

public static void setColor(String red,
                            String green,
                            String blue)

setTransparency

public static void setTransparency(String t)

setCoordinateSystem

public static void setCoordinateSystem(String s)

setThreshold

public static void setThreshold(String s)

applyTransform

public static void applyTransform(String transform)

resetTransform

public static void resetTransform()

saveTransform

public static void saveTransform(String transform,
                                 String path)

setTransform

public static void setTransform(String transform)

importContent

public static void importContent(String path)

exportTransformed

public static void exportTransformed()

exportContent

public static void exportContent(String format,
                                 String path)