Package sc.fiji.snt.viewer.geditor

Class SNTGraphComponent

java.lang.Object

java.awt.Component

java.awt.Container

javax.swing.JComponent

javax.swing.JScrollPane

com.mxgraph.swing.mxGraphComponent

sc.fiji.snt.viewer.geditor.SNTGraphComponent

All Implemented Interfaces:

ImageObserver, MenuContainer, Printable, Serializable, Accessible, ScrollPaneConstants

Direct Known Subclasses:

AnnotationGraphComponent, SNTPseudographComponent, TreeGraphComponent

public class SNTGraphComponent
extends com.mxgraph.swing.mxGraphComponent

Base JGraphX component for SNT graph visualization with interactive controls. Provides pan/zoom, rendering, export capabilities, and keyboard/mouse event handling for SNT graphs.

See Also:

• Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class com.mxgraph.swing.mxGraphComponent

com.mxgraph.swing.mxGraphComponent.mxGraphControl, com.mxgraph.swing.mxGraphComponent.mxMouseRedirector

Nested classes/interfaces inherited from class javax.swing.JScrollPane

JScrollPane.AccessibleJScrollPane, JScrollPane.ScrollBar

Nested classes/interfaces inherited from class javax.swing.JComponent

JComponent.AccessibleJComponent

Nested classes/interfaces inherited from class java.awt.Container

Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Field Summary

Fields

Modifier and Type	Field	Description
protected final SNTGraphAdapter<?,? extends org.jgrapht.graph.DefaultWeightedEdge>	adapter
protected org.scijava.command.CommandService	cmdService
protected File	saveDir

Fields inherited from class com.mxgraph.swing.mxGraphComponent

antiAlias, autoExtend, autoScroll, backgroundImage, canvas, cellEditor, centerPage, centerZoom, collapsedIcon, components, connectionHandler, DEFAULT_COLLAPSED_ICON, DEFAULT_EXPANDED_ICON, DEFAULT_PAGESCALE, DEFAULT_WARNING_ICON, dragEnabled, enterStopsCellEditing, escapeEnabled, eventSource, expandedIcon, exportEnabled, foldingEnabled, graph, graphControl, graphHandler, GRID_STYLE_CROSS, GRID_STYLE_DASHED, GRID_STYLE_DOT, GRID_STYLE_LINE, gridColor, gridStyle, gridVisible, horizontalPageCount, importEnabled, invokesStopCellEditing, keepSelectionVisibleOnZoom, overlays, pageBackgroundColor, pageBorderColor, pageBreakColor, pageBreaksVisible, pageFormat, pageScale, pageShadowColor, pageVisible, panningHandler, preferPageSize, previewAlpha, repaintHandler, scaleHandler, selectionCellsHandler, showDirtyRectangle, swimlaneSelectionEnabled, textAntiAlias, tolerance, transparentSwimlaneContent, tripleBuffer, tripleBuffered, tripleBufferGraphics, updateHandler, verticalPageCount, viewChangeHandler, warningIcon, ZOOM_POLICY_NONE, ZOOM_POLICY_PAGE, ZOOM_POLICY_WIDTH, zoomFactor, zoomPolicy

Fields inherited from class javax.swing.JScrollPane

columnHeader, horizontalScrollBar, horizontalScrollBarPolicy, lowerLeft, lowerRight, rowHeader, upperLeft, upperRight, verticalScrollBar, verticalScrollBarPolicy, viewport

Fields inherited from class javax.swing.JComponent

listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

Fields inherited from class java.awt.Component

accessibleContext, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface java.awt.print.Printable

NO_SUCH_PAGE, PAGE_EXISTS

Fields inherited from interface javax.swing.ScrollPaneConstants

COLUMN_HEADER, HORIZONTAL_SCROLLBAR, HORIZONTAL_SCROLLBAR_ALWAYS, HORIZONTAL_SCROLLBAR_AS_NEEDED, HORIZONTAL_SCROLLBAR_NEVER, HORIZONTAL_SCROLLBAR_POLICY, LOWER_LEADING_CORNER, LOWER_LEFT_CORNER, LOWER_RIGHT_CORNER, LOWER_TRAILING_CORNER, ROW_HEADER, UPPER_LEADING_CORNER, UPPER_LEFT_CORNER, UPPER_RIGHT_CORNER, UPPER_TRAILING_CORNER, VERTICAL_SCROLLBAR, VERTICAL_SCROLLBAR_ALWAYS, VERTICAL_SCROLLBAR_AS_NEEDED, VERTICAL_SCROLLBAR_NEVER, VERTICAL_SCROLLBAR_POLICY, VIEWPORT

Constructor Summary

Constructors

Constructor	Description
SNTGraphComponent(SNTGraphAdapter<?,? extends org.jgrapht.graph.DefaultWeightedEdge> adapter, org.scijava.Context context)

Method Summary

Modifier and Type	Method	Description
protected void	assignEditor(GraphEditor editor)	Assigns an editor.
protected void	centerGraph()
protected void	export(String extension)
protected void	exportDocument(Document doc, File file)
Dimension	getPreferredSize()
protected File	getSaveDir()
boolean	isPanningEvent(MouseEvent event)
void	refresh()
void	replaceGraph(AnnotationGraphAdapter adapter, boolean restoreParameters)

Methods inherited from class com.mxgraph.swing.mxGraphComponent

addCellOverlay, addListener, canExportCell, canImportCell, checkTripleBuffer, clearCellOverlays, clearCellOverlays, createCanvas, createCellEditor, createComponents, createConnectionHandler, createGraphControl, createGraphHandler, createHandler, createHandlers, createPanningHandler, createSelectionCellsHandler, createTransferHandler, createTripleBuffer, destroyTripleBuffer, escape, getBackgroundImage, getCanvas, getCellAt, getCellAt, getCellAt, getCellEditor, getCellOverlays, getCells, getCells, getConnectionHandler, getEditingValue, getExportableCells, getFoldingIcon, getFoldingIconBounds, getGraph, getGraphControl, getGraphHandler, getGridColor, getGridStyle, getHorizontalPageBorder, getHorizontalPageCount, getImportableCells, getLayoutAreaSize, getPageBackgroundColor, getPageBorderColor, getPageBreakColor, getPageFormat, getPageScale, getPageShadowColor, getPageTranslate, getPanningHandler, getPointForEvent, getPointForEvent, getPreferredSizeForPage, getPreviewAlpha, getScaledPreferredSizeForGraph, getSelectionCellsHandler, getTolerance, getTripleBuffer, getVerticalPageBorder, getVerticalPageCount, getZoomFactor, getZoomPolicy, hitFoldingIcon, importCells, insertComponent, installDoubleClickHandler, installFocusHandler, installKeyHandler, installResizeHandler, isAntiAlias, isAutoExtend, isAutoScroll, isCenterPage, isCenterZoom, isCloneEvent, isConnectable, isConstrainedEvent, isDragEnabled, isEditEvent, isEditing, isEnterStopsCellEditing, isEscapeEnabled, isEventsEnabled, isExportEnabled, isFoldingEnabled, isForceMarqueeEvent, isForceTripleBuffered, isGridEnabledEvent, isGridVisible, isImportEnabled, isInvokesStopCellEditing, isKeepSelectionVisibleOnZoom, isPageBreaksVisible, isPageVisible, isPanning, isPreferPageSize, isSignificant, isSwimlaneSelectionEnabled, isTextAntiAlias, isToggleEvent, isTripleBuffered, labelChanged, maintainScrollBar, paintBackground, paintBackgroundImage, paintBackgroundPage, paintGrid, print, redraw, removeAllComponents, removeAllOverlays, removeCellOverlay, removeCellOverlayComponent, removeCellOverlays, removeComponent, removeListener, removeListener, repaintTripleBuffer, scrollCellToVisible, scrollCellToVisible, scrollToCenter, selectCellForEvent, selectCellsForEvent, selectRegion, setAntiAlias, setAutoExtend, setAutoScroll, setBackgroundImage, setCellEditor, setCellWarning, setCellWarning, setCellWarning, setCenterPage, setCenterZoom, setConnectable, setDragEnabled, setEnterStopsCellEditing, setEscapeEnabled, setEventsEnabled, setExportEnabled, setFoldingEnabled, setGraph, setGridColor, setGridStyle, setGridVisible, setHorizontalPageCount, setImportEnabled, setInvokesStopCellEditing, setKeepSelectionVisibleOnZoom, setPageBackgroundColor, setPageBorderColor, setPageBreakColor, setPageBreaksVisible, setPageFormat, setPageScale, setPageShadowColor, setPageVisible, setPanning, setPreferPageSize, setPreviewAlpha, setSwimlaneSelectionEnabled, setTextAntiAlias, setTolerance, setToolTips, setTripleBuffered, setVerticalPageCount, setZoomFactor, setZoomPolicy, snapScaledPoint, snapScaledPoint, startEditing, startEditingAtCell, startEditingAtCell, stopEditing, updateCellOverlayComponent, updateCellOverlays, updateComponent, updateComponents, updateComponents, validateGraph, validateGraph, zoom, zoom, zoomActual, zoomAndCenter, zoomIn, zoomOut, zoomTo

Methods inherited from class javax.swing.JScrollPane

createHorizontalScrollBar, createVerticalScrollBar, createViewport, getAccessibleContext, getColumnHeader, getCorner, getHorizontalScrollBar, getHorizontalScrollBarPolicy, getRowHeader, getUI, getUIClassID, getVerticalScrollBar, getVerticalScrollBarPolicy, getViewport, getViewportBorder, getViewportBorderBounds, isValidateRoot, isWheelScrollingEnabled, paramString, setColumnHeader, setColumnHeaderView, setComponentOrientation, setCorner, setHorizontalScrollBar, setHorizontalScrollBarPolicy, setLayout, setRowHeader, setRowHeaderView, setUI, setVerticalScrollBar, setVerticalScrollBarPolicy, setViewport, setViewportBorder, setViewportView, setWheelScrollingEnabled, updateUI

Methods inherited from class javax.swing.JComponent

addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, hide, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingOrigin, isPaintingTile, isRequestFocusEnabled, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, resize, resize, setBounds, setBounds, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setMixingCutoutShape, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

cmdService

protected org.scijava.command.CommandService cmdService

adapter

protected final SNTGraphAdapter<?,? extends org.jgrapht.graph.DefaultWeightedEdge> adapter

saveDir

protected File saveDir

Constructor Details

SNTGraphComponent

public SNTGraphComponent(SNTGraphAdapter<?,? extends org.jgrapht.graph.DefaultWeightedEdge> adapter,
 org.scijava.Context context)

Method Details

isPanningEvent

public boolean isPanningEvent(MouseEvent event)

Overrides:

isPanningEvent in class com.mxgraph.swing.mxGraphComponent

getPreferredSize

public Dimension getPreferredSize()

Overrides:

getPreferredSize in class JComponent

centerGraph

protected void centerGraph()

export

protected void export(String extension)

getSaveDir

protected File getSaveDir()

exportDocument

protected void exportDocument(Document doc,
 File file)
                       throws TransformerException

Throws:

TransformerException

assignEditor

protected void assignEditor(GraphEditor editor)

Assigns an editor. Once and editor has been assigned calling refresh() will also refresh the editor.

Parameters:

editor - the assigned editor

replaceGraph

public void replaceGraph(AnnotationGraphAdapter adapter,
 boolean restoreParameters)

refresh

public void refresh()

Overrides:

refresh in class com.mxgraph.swing.mxGraphComponent