Package sc.fiji.snt.annotation

Class InsectBrainUtils

java.lang.Object

sc.fiji.snt.annotation.InsectBrainUtils

public final class InsectBrainUtils
extends Object

Utility methods for retrieving species, brain, and neuron data from the Insect Brain Database

Author:

Cameron Arshadi, Tiago Ferreira

Method Summary

Modifier and Type	Method	Description
static List<Integer>	getAllNeuronIDs()
protected static Map<String,List<Integer>>	getAllNeuronIDsOrganizedBySpecies()
static List<Map<String,Object>>	getAllSpecies()
static List<InsectBrainCompartment>	getBrainCompartments(int speciesId, String sex)
static org.json.JSONObject	getBrainJSON(int speciesId)
static List<OBJMesh>	getBrainMeshes(int speciesId, String sex)
static List<Integer>	getSpeciesNeuronIDs(int speciesId)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

getAllSpecies

public static List<Map<String,Object>> getAllSpecies()

getAllNeuronIDsOrganizedBySpecies

protected static Map<String,List<Integer>> getAllNeuronIDsOrganizedBySpecies()

getAllNeuronIDs

public static List<Integer> getAllNeuronIDs()

getSpeciesNeuronIDs

public static List<Integer> getSpeciesNeuronIDs(int speciesId)

getBrainJSON

public static org.json.JSONObject getBrainJSON(int speciesId)

getBrainCompartments

public static List<InsectBrainCompartment> getBrainCompartments(int speciesId,
 String sex)

getBrainMeshes

public static List<OBJMesh> getBrainMeshes(int speciesId,
 String sex)