org.janelia.saalfeldlab.n5.zarr

Class ZarrDatasetAttributes

java.lang.Object

org.janelia.saalfeldlab.n5.DatasetAttributes

org.janelia.saalfeldlab.n5.zarr.ZarrDatasetAttributes

All Implemented Interfaces:

Serializable

public class ZarrDatasetAttributes
extends org.janelia.saalfeldlab.n5.DatasetAttributes

Author:

Stephan Saalfeld <saalfelds@janelia.hhmi.org>

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class org.janelia.saalfeldlab.n5.DatasetAttributes

org.janelia.saalfeldlab.n5.DatasetAttributes.Builder, org.janelia.saalfeldlab.n5.DatasetAttributes.DatasetAttributesAdapter

Field Summary

Fields

Modifier and Type	Field and Description
protected byte[]	fillBytes
protected ZArrayAttributes	zarray

Fields inherited from class org.janelia.saalfeldlab.n5.DatasetAttributes

BLOCK_SIZE_KEY, CODEC_KEY, COMPRESSION_KEY, compressionTypeKey, DATA_TYPE_KEY, DIMENSIONS_KEY, N5_DATASET_ATTRIBUTES, SHARD_SIZE_KEY

Constructor Summary

Constructors

Constructor and Description
ZarrDatasetAttributes(long[] dimensions, int[] blockSize, DType dType, org.janelia.saalfeldlab.n5.Compression compression, boolean isRowMajor, String fill_value)
ZarrDatasetAttributes(long[] dimensions, int[] blockSize, DType dType, org.janelia.saalfeldlab.n5.Compression compression, boolean isRowMajor, String fill_value, String dimensionSeparator)
ZarrDatasetAttributes(ZArrayAttributes zarray)

Method Summary

Modifier and Type	Method and Description
HashMap<String,Object>	asMap()
static ZArrayAttributes	createZArrayAttributes(DType dType, String dimensionSeparator, char order, org.janelia.saalfeldlab.n5.DatasetAttributes datasetAttributes)
static ZArrayAttributes	createZArrayAttributes(String dimensionSeparator, org.janelia.saalfeldlab.n5.DatasetAttributes datasetAttributes)
protected org.janelia.saalfeldlab.n5.codec.BlockCodecInfo	defaultBlockCodecInfo()
String	getDimensionSeparator()
DType	getDType()
byte[]	getFillBytes()
ZArrayAttributes	getZArrayAttributes()
boolean	isRowMajor()
String	relativeBlockPath(long... gridPosition)

Methods inherited from class org.janelia.saalfeldlab.n5.DatasetAttributes

builder, builder, defaultBlockSize, getBlockCodecInfo, getBlockSize, getChunkSize, getCompression, getDataCodecInfos, getDatasetAccess, getDatasetCodecInfos, getDataType, getDefaultValue, getDimensions, getJsonAdapter, getNestedBlockGrid, getNumDimensions, isSharded

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

zarray

protected final ZArrayAttributes zarray

fillBytes

protected final transient byte[] fillBytes

Constructor Detail

ZarrDatasetAttributes

public ZarrDatasetAttributes(ZArrayAttributes zarray)

ZarrDatasetAttributes

public ZarrDatasetAttributes(long[] dimensions,
                             int[] blockSize,
                             DType dType,
                             org.janelia.saalfeldlab.n5.Compression compression,
                             boolean isRowMajor,
                             String fill_value,
                             String dimensionSeparator)

ZarrDatasetAttributes

public ZarrDatasetAttributes(long[] dimensions,
                             int[] blockSize,
                             DType dType,
                             org.janelia.saalfeldlab.n5.Compression compression,
                             boolean isRowMajor,
                             String fill_value)

Method Detail

defaultBlockCodecInfo

protected org.janelia.saalfeldlab.n5.codec.BlockCodecInfo defaultBlockCodecInfo()

Overrides:

defaultBlockCodecInfo in class org.janelia.saalfeldlab.n5.DatasetAttributes

getZArrayAttributes

public ZArrayAttributes getZArrayAttributes()

isRowMajor

public boolean isRowMajor()

getDType

public DType getDType()

getFillBytes

public byte[] getFillBytes()

getDimensionSeparator

public String getDimensionSeparator()

relativeBlockPath

public String relativeBlockPath(long... gridPosition)

Overrides:

relativeBlockPath in class org.janelia.saalfeldlab.n5.DatasetAttributes

asMap

public HashMap<String,Object> asMap()

Overrides:

asMap in class org.janelia.saalfeldlab.n5.DatasetAttributes

createZArrayAttributes

public static ZArrayAttributes createZArrayAttributes(String dimensionSeparator,
                                                      org.janelia.saalfeldlab.n5.DatasetAttributes datasetAttributes)

createZArrayAttributes

public static ZArrayAttributes createZArrayAttributes(DType dType,
                                                      String dimensionSeparator,
                                                      char order,
                                                      org.janelia.saalfeldlab.n5.DatasetAttributes datasetAttributes)