Package net.preibisch.mvrecon.process.quality

Class FRCTools

java.lang.Object

net.preibisch.mvrecon.process.quality.FRCTools

public class FRCTools
extends Object

Constructor Summary

Constructors

Constructor	Description
FRCTools()

Method Summary

Modifier and Type	Method	Description
static FRCRealRandomAccessible<net.imglib2.type.numeric.real.FloatType>	computeFRC(mpicbg.spim.data.sequence.ViewId viewId, mpicbg.spim.data.generic.sequence.BasicImgLoader imgLoader, int zStepSize, int fftSize, boolean relative)
static FRCRealRandomAccessible<net.imglib2.type.numeric.real.FloatType>	distributeGridFRC(net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType> input, double overlapTolerance, int distanceZ, int fhtSqSize, boolean relative, int zMinDist, ExecutorService service)
static ArrayList<net.imglib2.util.Pair<Long,Long>>	distributeSquaresXY(net.imglib2.Interval interval, long length, double overlapTolerance)
static FRCRealRandomAccessible<net.imglib2.type.numeric.real.FloatType>	fixedGridFRC(net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType> input, int distanceXY, int distanceZ, int fhtSqSize, boolean relative, int zMinDist, ExecutorService service)
static ArrayList<net.imglib2.util.Pair<Long,Long>>	fixedGridXY(net.imglib2.Interval interval, long distance)
static net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType>	fuseRAIs(Collection<net.imglib2.util.Pair<net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType>,net.imglib2.realtransform.AffineTransform3D>> data, double downsampling, net.imglib2.Interval boundingBox, int interpolation)
static net.imglib2.FinalDimensions	getDimensions(net.imglib2.Interval interval)
protected static final ArrayList<Long>	getLocations(long numSq, long imgSize)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

FRCTools

public FRCTools()

Method Details

computeFRC

public static FRCRealRandomAccessible<net.imglib2.type.numeric.real.FloatType> computeFRC(mpicbg.spim.data.sequence.ViewId viewId,
 mpicbg.spim.data.generic.sequence.BasicImgLoader imgLoader,
 int zStepSize,
 int fftSize,
 boolean relative)

fuseRAIs

public static net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType> fuseRAIs(Collection<net.imglib2.util.Pair<net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType>,net.imglib2.realtransform.AffineTransform3D>> data,
 double downsampling,
 net.imglib2.Interval boundingBox,
 int interpolation)

getDimensions

public static net.imglib2.FinalDimensions getDimensions(net.imglib2.Interval interval)

fixedGridFRC

public static FRCRealRandomAccessible<net.imglib2.type.numeric.real.FloatType> fixedGridFRC(net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType> input,
 int distanceXY,
 int distanceZ,
 int fhtSqSize,
 boolean relative,
 int zMinDist,
 ExecutorService service)

distributeGridFRC

public static FRCRealRandomAccessible<net.imglib2.type.numeric.real.FloatType> distributeGridFRC(net.imglib2.RandomAccessibleInterval<net.imglib2.type.numeric.real.FloatType> input,
 double overlapTolerance,
 int distanceZ,
 int fhtSqSize,
 boolean relative,
 int zMinDist,
 ExecutorService service)

fixedGridXY

public static ArrayList<net.imglib2.util.Pair<Long,Long>> fixedGridXY(net.imglib2.Interval interval,
 long distance)

distributeSquaresXY

public static ArrayList<net.imglib2.util.Pair<Long,Long>> distributeSquaresXY(net.imglib2.Interval interval,
 long length,
 double overlapTolerance)

getLocations

protected static final ArrayList<Long> getLocations(long numSq,
 long imgSize)