Package net.preibisch.mvrecon.process.interestpointregistration.pairwise

Class MatcherPairwiseTools

java.lang.Object

net.preibisch.mvrecon.process.interestpointregistration.pairwise.MatcherPairwiseTools

public class MatcherPairwiseTools
extends Object

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	MatcherPairwiseTools.MatchingTask<V>

Constructor Summary

Constructors

Constructor	Description
MatcherPairwiseTools()

Method Summary

Modifier and Type	Method	Description
static <I extends InterestPoint> void	addCorrespondences(List<PointMatchGeneric<I>> correspondences, List<Integer> setIds, mpicbg.spim.data.sequence.ViewId viewIdA, mpicbg.spim.data.sequence.ViewId viewIdB, String labelA, String labelB, InterestPoints listA, InterestPoints listB)
static <I extends InterestPoint> void	addCorrespondences(List<PointMatchGeneric<I>> correspondences, mpicbg.spim.data.sequence.ViewId viewIdA, mpicbg.spim.data.sequence.ViewId viewIdB, String labelA, String labelB, InterestPoints listA, InterestPoints listB)
static <V extends mpicbg.spim.data.sequence.ViewId, P extends PairwiseResult<GroupedInterestPoint<V>>> List<net.imglib2.util.Pair<net.imglib2.util.Pair<V,V>,PairwiseResult<GroupedInterestPoint<V>>>>	addCorrespondencesFromGroups(Collection<? extends net.imglib2.util.Pair<?,P>> resultGroup, Map<V,ViewInterestPointLists> interestpoints, Map<V,HashMap<String,List<CorrespondingInterestPoints>>> cMap)
static <V> HashSet<V>	allViews(Group<? extends V> a, Group<? extends V> b)
static void	assignLoggingDescriptions(net.imglib2.util.Pair<?,?> p, PairwiseResult<?> pwr)
static <V extends mpicbg.spim.data.sequence.ViewId> Map<V,HashMap<String,List<CorrespondingInterestPoints>>>	clearCorrespondences(Collection<V> viewIds, Map<V,ViewInterestPointLists> interestpoints, Map<V,HashMap<String,Double>> labelMap)
static <V extends mpicbg.spim.data.sequence.ViewId> Map<V,HashMap<String,List<CorrespondingInterestPoints>>>	clearCorrespondences(Map<V,? extends Map<String,? extends InterestPoints>> map)
static <V, I extends InterestPoint> List<net.imglib2.util.Pair<net.imglib2.util.Pair<V,V>,PairwiseResult<I>>>	computePairs(List<net.imglib2.util.Pair<V,V>> pairs, Map<V,? extends Map<String,? extends Collection<I>>> interestpoints, MatcherPairwise<I> matcher, boolean matchAcrossLabels, ExecutorService exec)
static <V, I extends InterestPoint> List<net.imglib2.util.Pair<net.imglib2.util.Pair<V,V>,PairwiseResult<I>>>	computePairs(List<net.imglib2.util.Pair<V,V>> pairs, Map<V,HashMap<String,Collection<I>>> interestpoints, MatcherPairwise<I> matcher, boolean matchAcrossLabels)
static <V, I extends InterestPoint> ArrayList<Callable<net.imglib2.util.Pair<net.imglib2.util.Pair<V,V>,PairwiseResult<I>>>>	getCallables(List<MatcherPairwiseTools.MatchingTask<V>> tasks, Map<V,? extends Map<String,? extends Collection<I>>> interestpoints, MatcherPairwise<I> matcher)
static <V, I extends InterestPoint> ArrayList<MatcherPairwiseTools.MatchingTask<V>>	getTasksList(List<net.imglib2.util.Pair<V,V>> pairs, Map<V,? extends Map<String,?>> interestpoints, boolean matchAcrossLabels)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

MatcherPairwiseTools

public MatcherPairwiseTools()

Method Details

allViews

public static <V> HashSet<V> allViews(Group<? extends V> a,
 Group<? extends V> b)

clearCorrespondences

public static <V extends mpicbg.spim.data.sequence.ViewId>
Map<V,HashMap<String,List<CorrespondingInterestPoints>>> clearCorrespondences(Collection<V> viewIds,
 Map<V,ViewInterestPointLists> interestpoints,
 Map<V,HashMap<String,Double>> labelMap)

clearCorrespondences

public static <V extends mpicbg.spim.data.sequence.ViewId>
Map<V,HashMap<String,List<CorrespondingInterestPoints>>> clearCorrespondences(Map<V,? extends Map<String,? extends InterestPoints>> map)

addCorrespondencesFromGroups

public static <V extends mpicbg.spim.data.sequence.ViewId,
P extends PairwiseResult<GroupedInterestPoint<V>>>
List<net.imglib2.util.Pair<net.imglib2.util.Pair<V,V>,PairwiseResult<GroupedInterestPoint<V>>>> addCorrespondencesFromGroups(Collection<? extends net.imglib2.util.Pair<?,P>> resultGroup,
 Map<V,ViewInterestPointLists> interestpoints,
 Map<V,HashMap<String,List<CorrespondingInterestPoints>>> cMap)

addCorrespondences

public static <I extends InterestPoint> void addCorrespondences(List<PointMatchGeneric<I>> correspondences,
 List<Integer> setIds,
 mpicbg.spim.data.sequence.ViewId viewIdA,
 mpicbg.spim.data.sequence.ViewId viewIdB,
 String labelA,
 String labelB,
 InterestPoints listA,
 InterestPoints listB)

addCorrespondences

public static <I extends InterestPoint> void addCorrespondences(List<PointMatchGeneric<I>> correspondences,
 mpicbg.spim.data.sequence.ViewId viewIdA,
 mpicbg.spim.data.sequence.ViewId viewIdB,
 String labelA,
 String labelB,
 InterestPoints listA,
 InterestPoints listB)

assignLoggingDescriptions

public static void assignLoggingDescriptions(net.imglib2.util.Pair<?,?> p,
 PairwiseResult<?> pwr)

computePairs

public static <V,
I extends InterestPoint>
List<net.imglib2.util.Pair<net.imglib2.util.Pair<V,V>,PairwiseResult<I>>> computePairs(List<net.imglib2.util.Pair<V,V>> pairs,
 Map<V,HashMap<String,Collection<I>>> interestpoints,
 MatcherPairwise<I> matcher,
 boolean matchAcrossLabels)

computePairs

public static <V,
I extends InterestPoint>
List<net.imglib2.util.Pair<net.imglib2.util.Pair<V,V>,PairwiseResult<I>>> computePairs(List<net.imglib2.util.Pair<V,V>> pairs,
 Map<V,? extends Map<String,? extends Collection<I>>> interestpoints,
 MatcherPairwise<I> matcher,
 boolean matchAcrossLabels,
 ExecutorService exec)

getTasksList

public static <V,
I extends InterestPoint>
ArrayList<MatcherPairwiseTools.MatchingTask<V>> getTasksList(List<net.imglib2.util.Pair<V,V>> pairs,
 Map<V,? extends Map<String,?>> interestpoints,
 boolean matchAcrossLabels)

getCallables

public static <V,
I extends InterestPoint>
ArrayList<Callable<net.imglib2.util.Pair<net.imglib2.util.Pair<V,V>,PairwiseResult<I>>>> getCallables(List<MatcherPairwiseTools.MatchingTask<V>> tasks,
 Map<V,? extends Map<String,? extends Collection<I>>> interestpoints,
 MatcherPairwise<I> matcher)