Package net.preibisch.mvrecon.fiji.spimdata.interestpoints

Class InterestPoints

java.lang.Object
net.preibisch.mvrecon.fiji.spimdata.interestpoints.InterestPoints
Direct Known Subclasses:
InterestPointsN5
public abstract class InterestPoints extends Object
A list of interest points for a certain label, can save and load from textfile as specified in the XML
Author:
Stephan Preibisch (stephan.preibisch@gmx.de)

  • Constructor Details

    • InterestPoints

      protected InterestPoints(URI basePath)

  • Method Details

    • instantiatefromXML

      public static InterestPoints instantiatefromXML(URI baseDir, String fromXMLInfo)

    • newInstance

      public static InterestPoints newInstance(URI baseDir, mpicbg.spim.data.sequence.ViewId viewId, String label)

    • hasModifiedInterestPoints

      public boolean hasModifiedInterestPoints()

    • hasModifiedCorrespondingInterestPoints

      public boolean hasModifiedCorrespondingInterestPoints()

    • getBasePath

      public URI getBasePath()

    • setBasePath

      public void setBasePath(URI basePath)

    • deleteInterestPoints

      public abstract boolean deleteInterestPoints()

    • deleteCorrespondingInterestPoints

      public abstract boolean deleteCorrespondingInterestPoints()

    • getParameters

      public String getParameters()
      Returns:
      the parameters used for segmenting these points

    • setParameters

      public void setParameters(String parameters)

    • getXMLRepresentation

      public abstract String getXMLRepresentation()
      Returns:
      a string to be stored in the XML, also used to instantiate this object (e.g. file path)

    • getInterestPointsCopy

      public abstract Map<Integer,InterestPoint> getInterestPointsCopy()
      Returns:
      - a map from interest point ID to interest points (copied), tries to load from disc if null

    • getCorrespondingInterestPointsCopy

      public abstract Collection<CorrespondingInterestPoints> getCorrespondingInterestPointsCopy()
      Returns:
      - the collection of corresponding interest points (copied), tries to load from disc if null

    • setInterestPoints

      public void setInterestPoints(Collection<InterestPoint> list)

    • setCorrespondingInterestPoints

      public void setCorrespondingInterestPoints(Collection<CorrespondingInterestPoints> list)

    • setInterestPointsLocal

      protected abstract void setInterestPointsLocal(Collection<InterestPoint> list)

    • setCorrespondingInterestPointsLocal

      protected abstract void setCorrespondingInterestPointsLocal(Collection<CorrespondingInterestPoints> list)

    • saveInterestPoints

      public abstract boolean saveInterestPoints(boolean forceWrite)

    • saveCorrespondingInterestPoints

      public abstract boolean saveCorrespondingInterestPoints(boolean forceWrite)

    • loadCorrespondences

      protected abstract boolean loadCorrespondences()

    • loadInterestPoints

      protected abstract boolean loadInterestPoints()