Package net.preibisch.mvrecon.process.interestpointdetection

Class InterestPointTools

java.lang.Object

net.preibisch.mvrecon.process.interestpointdetection.InterestPointTools

public class InterestPointTools
extends Object

The type Interest point tools.

Field Summary

Fields

Modifier and Type	Field	Description
static String[]	limitDetectionChoice
static final String	warningLabel

Constructor Summary

Constructors

Constructor	Description
InterestPointTools()

Method Summary

Modifier and Type	Method	Description
static boolean	addInterestPoints(SpimData2 data, String label, HashMap<mpicbg.spim.data.sequence.ViewId,List<InterestPoint>> points)	Add interest points.
static boolean	addInterestPoints(SpimData2 data, String label, HashMap<mpicbg.spim.data.sequence.ViewId,List<InterestPoint>> points, String parameters)	Add interest points.
static HashMap<String,Integer>	getAllCorrespondingInterestPointMap(ViewInterestPoints interestPoints, Collection<? extends mpicbg.spim.data.sequence.ViewId> views)
static String[]	getAllInterestPointLabels(HashMap<String,Integer> labels, List<? extends mpicbg.spim.data.sequence.ViewId> viewIdsToProcess)
static String[]	getAllInterestPointLabels(SpimData2 spimData, List<? extends mpicbg.spim.data.sequence.ViewId> viewIdsToProcess)	Goes through all Views and checks all available labels for interest point detection
static HashMap<String,Integer>	getAllInterestPointMap(ViewInterestPoints interestPoints, Collection<? extends mpicbg.spim.data.sequence.ViewId> views)
static String	getSelectedLabel(String[] labels, int choice)
static List<InterestPoint>	limitList(int maxDetections, int maxDetectionsTypeIndex, List<InterestPoint> list)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

warningLabel

public static final String warningLabel

See Also:

• Constant Field Values

limitDetectionChoice

public static String[] limitDetectionChoice

Constructor Details

InterestPointTools

public InterestPointTools()

Method Details

getSelectedLabel

public static String getSelectedLabel(String[] labels,
 int choice)

getAllInterestPointLabels

public static String[] getAllInterestPointLabels(SpimData2 spimData,
 List<? extends mpicbg.spim.data.sequence.ViewId> viewIdsToProcess)

Goes through all Views and checks all available labels for interest point detection

Parameters:

spimData - - the SpimData object

viewIdsToProcess - - for which viewIds

Returns:

- labels of all interest points

getAllInterestPointLabels

public static String[] getAllInterestPointLabels(HashMap<String,Integer> labels,
 List<? extends mpicbg.spim.data.sequence.ViewId> viewIdsToProcess)

getAllCorrespondingInterestPointMap

public static HashMap<String,Integer> getAllCorrespondingInterestPointMap(ViewInterestPoints interestPoints,
 Collection<? extends mpicbg.spim.data.sequence.ViewId> views)

getAllInterestPointMap

public static HashMap<String,Integer> getAllInterestPointMap(ViewInterestPoints interestPoints,
 Collection<? extends mpicbg.spim.data.sequence.ViewId> views)

addInterestPoints

public static boolean addInterestPoints(SpimData2 data,
 String label,
 HashMap<mpicbg.spim.data.sequence.ViewId,List<InterestPoint>> points)

Add interest points. Does not save the InteresPoints

Parameters:

data - the data

label - the label

points - the points

Returns:

the true if successful

addInterestPoints

public static boolean addInterestPoints(SpimData2 data,
 String label,
 HashMap<mpicbg.spim.data.sequence.ViewId,List<InterestPoint>> points,
 String parameters)

Add interest points.

Parameters:

data - the data

label - the label

points - the points

parameters - the parameters

Returns:

the true if successful, false if interest points cannot be saved

limitList

public static List<InterestPoint> limitList(int maxDetections,
 int maxDetectionsTypeIndex,
 List<InterestPoint> list)