Package net.preibisch.mvrecon.process.fusion.transformed.nonrigid.grid

Class NumericAffineTransform3D

java.lang.Object

net.preibisch.mvrecon.process.fusion.transformed.nonrigid.grid.NumericAffineTransform3D

All Implemented Interfaces:

net.imglib2.type.NativeType<NumericAffineTransform3D>, net.imglib2.type.numeric.NumericType<NumericAffineTransform3D>, net.imglib2.type.operators.Add<NumericAffineTransform3D>, net.imglib2.type.operators.Div<NumericAffineTransform3D>, net.imglib2.type.operators.Mul<NumericAffineTransform3D>, net.imglib2.type.operators.MulFloatingPoint, net.imglib2.type.operators.Pow<NumericAffineTransform3D>, net.imglib2.type.operators.PowFloatingPoint, net.imglib2.type.operators.SetOne, net.imglib2.type.operators.SetZero, net.imglib2.type.operators.Sub<NumericAffineTransform3D>, net.imglib2.type.operators.ValueEquals<NumericAffineTransform3D>, net.imglib2.type.Type<NumericAffineTransform3D>

public class NumericAffineTransform3D
extends Object
implements net.imglib2.type.numeric.NumericType<NumericAffineTransform3D>, net.imglib2.type.NativeType<NumericAffineTransform3D>

Field Summary

Fields

Modifier and Type	Field	Description
protected net.imglib2.img.basictypeaccess.DoubleAccess	dataAccess
protected final net.imglib2.img.NativeImg<?,? extends net.imglib2.img.basictypeaccess.DoubleAccess>	img

Constructor Summary

Constructors

Constructor	Description
NumericAffineTransform3D()
NumericAffineTransform3D(net.imglib2.img.NativeImg<?,? extends net.imglib2.img.basictypeaccess.DoubleAccess> modelDoubleStorage)
NumericAffineTransform3D(net.imglib2.realtransform.AffineTransform3D model)
NumericAffineTransform3D(NumericAffineTransform3D model)

Method Summary

Modifier and Type	Method	Description
void	add(NumericAffineTransform3D c)
NumericAffineTransform3D	copy()
NumericAffineTransform3D	createVariable()
void	decIndex()
void	decIndex(int decrement)
void	div(NumericAffineTransform3D c)
NumericAffineTransform3D	duplicateTypeOnSameNativeImg()
protected final double	getAtBase(int j)
net.imglib2.util.Fraction	getEntitiesPerPixel()
net.imglib2.type.NativeTypeFactory<NumericAffineTransform3D,net.imglib2.img.basictypeaccess.DoubleAccess>	getNativeTypeFactory()
net.imglib2.realtransform.AffineTransform3D	getTransform()
void	incIndex()
void	incIndex(int increment)
net.imglib2.type.Index	index()
void	mul(double c)
void	mul(float c)
void	mul(NumericAffineTransform3D c)
void	pow(double c)
void	pow(NumericAffineTransform3D c)
void	set(NumericAffineTransform3D c)
void	setAffineModel(net.imglib2.realtransform.AffineTransform3D model)
protected final void	setAtBase(int j, double value)
void	setOne()
void	setZero()
void	sub(NumericAffineTransform3D c)
void	updateContainer(Object c)
void	updateIndex(int i)
protected void	updateTransformTmp()
boolean	valueEquals(NumericAffineTransform3D c)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.imglib2.type.NativeType

getIndex

Field Details

img

protected final net.imglib2.img.NativeImg<?,? extends net.imglib2.img.basictypeaccess.DoubleAccess> img

dataAccess

protected net.imglib2.img.basictypeaccess.DoubleAccess dataAccess

Constructor Details

NumericAffineTransform3D

public NumericAffineTransform3D(net.imglib2.img.NativeImg<?,? extends net.imglib2.img.basictypeaccess.DoubleAccess> modelDoubleStorage)

NumericAffineTransform3D

public NumericAffineTransform3D(NumericAffineTransform3D model)

NumericAffineTransform3D

public NumericAffineTransform3D(net.imglib2.realtransform.AffineTransform3D model)

NumericAffineTransform3D

public NumericAffineTransform3D()

Method Details

updateTransformTmp

protected void updateTransformTmp()

index

public net.imglib2.type.Index index()

Specified by:

index in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

getAtBase

protected final double getAtBase(int j)

setAtBase

protected final void setAtBase(int j,
 double value)

setAffineModel

public void setAffineModel(net.imglib2.realtransform.AffineTransform3D model)

getTransform

public net.imglib2.realtransform.AffineTransform3D getTransform()

createVariable

public NumericAffineTransform3D createVariable()

Specified by:

createVariable in interface net.imglib2.type.Type<NumericAffineTransform3D>

copy

public NumericAffineTransform3D copy()

Specified by:

copy in interface net.imglib2.type.Type<NumericAffineTransform3D>

set

public void set(NumericAffineTransform3D c)

Specified by:

set in interface net.imglib2.type.Type<NumericAffineTransform3D>

valueEquals

public boolean valueEquals(NumericAffineTransform3D c)

Specified by:

valueEquals in interface net.imglib2.type.operators.ValueEquals<NumericAffineTransform3D>

add

public void add(NumericAffineTransform3D c)

Specified by:

add in interface net.imglib2.type.operators.Add<NumericAffineTransform3D>

mul

public void mul(NumericAffineTransform3D c)

Specified by:

mul in interface net.imglib2.type.operators.Mul<NumericAffineTransform3D>

sub

public void sub(NumericAffineTransform3D c)

Specified by:

sub in interface net.imglib2.type.operators.Sub<NumericAffineTransform3D>

div

public void div(NumericAffineTransform3D c)

Specified by:

div in interface net.imglib2.type.operators.Div<NumericAffineTransform3D>

setOne

public void setOne()

Specified by:

setOne in interface net.imglib2.type.operators.SetOne

setZero

public void setZero()

Specified by:

setZero in interface net.imglib2.type.operators.SetZero

mul

public void mul(float c)

Specified by:

mul in interface net.imglib2.type.operators.MulFloatingPoint

mul

public void mul(double c)

Specified by:

mul in interface net.imglib2.type.operators.MulFloatingPoint

getEntitiesPerPixel

public net.imglib2.util.Fraction getEntitiesPerPixel()

Specified by:

getEntitiesPerPixel in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

duplicateTypeOnSameNativeImg

public NumericAffineTransform3D duplicateTypeOnSameNativeImg()

Specified by:

duplicateTypeOnSameNativeImg in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

getNativeTypeFactory

public net.imglib2.type.NativeTypeFactory<NumericAffineTransform3D,net.imglib2.img.basictypeaccess.DoubleAccess> getNativeTypeFactory()

Specified by:

getNativeTypeFactory in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

updateContainer

public void updateContainer(Object c)

Specified by:

updateContainer in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

updateIndex

public void updateIndex(int i)

Specified by:

updateIndex in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

incIndex

public void incIndex()

Specified by:

incIndex in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

incIndex

public void incIndex(int increment)

Specified by:

incIndex in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

decIndex

public void decIndex()

Specified by:

decIndex in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

decIndex

public void decIndex(int decrement)

Specified by:

decIndex in interface net.imglib2.type.NativeType<NumericAffineTransform3D>

pow

public void pow(NumericAffineTransform3D c)

Specified by:

pow in interface net.imglib2.type.operators.Pow<NumericAffineTransform3D>

pow

public void pow(double c)

Specified by:

pow in interface net.imglib2.type.operators.PowFloatingPoint