Package net.preibisch.mvrecon.process.fusion.transformed

Class TransformedInputGeneralRandomAccess<T extends net.imglib2.type.numeric.RealType<T>>

java.lang.Object

net.imglib2.AbstractEuclideanSpace

net.imglib2.AbstractLocalizableInt

net.preibisch.mvrecon.process.fusion.transformed.TransformedInputGeneralRandomAccess<T>

Type Parameters:

T - pixel type

All Implemented Interfaces:

net.imglib2.EuclideanSpace, net.imglib2.Localizable, net.imglib2.Positionable, net.imglib2.RandomAccess<net.imglib2.type.numeric.real.FloatType>, net.imglib2.RealLocalizable, net.imglib2.Sampler<net.imglib2.type.numeric.real.FloatType>, net.imglib2.Typed<net.imglib2.type.numeric.real.FloatType>

public class TransformedInputGeneralRandomAccess<T extends net.imglib2.type.numeric.RealType<T>>
extends net.imglib2.AbstractLocalizableInt
implements net.imglib2.RandomAccess<net.imglib2.type.numeric.real.FloatType>

Virtually transforms any RandomAccessibleInterval<RealType> into a RandomAccess<FloatType> using an AffineTransformation

Author:

preibisch

Field Summary

Fields inherited from class net.imglib2.AbstractLocalizableInt

position

Fields inherited from class net.imglib2.AbstractEuclideanSpace

n

Constructor Summary

Constructors

Constructor

Description

TransformedInputGeneralRandomAccess(net.imglib2.RandomAccessibleInterval<T> img, net.imglib2.realtransform.AffineTransform3D transform, net.imglib2.interpolation.InterpolatorFactory<net.imglib2.type.numeric.real.FloatType,net.imglib2.RandomAccessible<net.imglib2.type.numeric.real.FloatType>> interpolatorFactory, net.imglib2.outofbounds.OutOfBoundsFactory<T,net.imglib2.RandomAccessible<T>> outOfBoundsFactory, long[] offset)

Method Summary

Modifier and Type	Method	Description
void	bck(int d)
TransformedInputGeneralRandomAccess<T>	copy()
TransformedInputGeneralRandomAccess<T>	copyRandomAccess()
void	fwd(int d)
net.imglib2.type.numeric.real.FloatType	get()
void	move(int[] distance)
void	move(int distance, int d)
void	move(long[] distance)
void	move(long distance, int d)
void	move(net.imglib2.Localizable localizable)
void	setPosition(int[] pos)
void	setPosition(int pos, int d)
void	setPosition(long[] pos)
void	setPosition(long pos, int d)
void	setPosition(net.imglib2.Localizable localizable)

Methods inherited from class net.imglib2.AbstractLocalizableInt

getDoublePosition, getFloatPosition, getIntPosition, getLongPosition, localize, localize, localize, localize

Methods inherited from class net.imglib2.AbstractEuclideanSpace

numDimensions

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.imglib2.EuclideanSpace

numDimensions

Methods inherited from interface net.imglib2.Localizable

getDoublePosition, getFloatPosition, getIntPosition, getLongPosition, localize, localize, localize, localize, positionAsLongArray, positionAsPoint

Methods inherited from interface net.imglib2.RandomAccess

setPositionAndGet, setPositionAndGet, setPositionAndGet

Methods inherited from interface net.imglib2.RealLocalizable

localize, localize, positionAsDoubleArray, positionAsRealPoint

Methods inherited from interface net.imglib2.Sampler

getType

Constructor Details

TransformedInputGeneralRandomAccess

public TransformedInputGeneralRandomAccess(net.imglib2.RandomAccessibleInterval<T> img,
 net.imglib2.realtransform.AffineTransform3D transform,
 net.imglib2.interpolation.InterpolatorFactory<net.imglib2.type.numeric.real.FloatType,net.imglib2.RandomAccessible<net.imglib2.type.numeric.real.FloatType>> interpolatorFactory,
 net.imglib2.outofbounds.OutOfBoundsFactory<T,net.imglib2.RandomAccessible<T>> outOfBoundsFactory,
 long[] offset)

Method Details

get

public net.imglib2.type.numeric.real.FloatType get()

Specified by:

get in interface net.imglib2.Sampler<T extends net.imglib2.type.numeric.RealType<T>>

copy

public TransformedInputGeneralRandomAccess<T> copy()

Specified by:

copy in interface net.imglib2.RandomAccess<T extends net.imglib2.type.numeric.RealType<T>>

Specified by:

copy in interface net.imglib2.Sampler<T extends net.imglib2.type.numeric.RealType<T>>

copyRandomAccess

public TransformedInputGeneralRandomAccess<T> copyRandomAccess()

Specified by:

copyRandomAccess in interface net.imglib2.RandomAccess<T extends net.imglib2.type.numeric.RealType<T>>

fwd

public void fwd(int d)

Specified by:

fwd in interface net.imglib2.Positionable

bck

public void bck(int d)

Specified by:

bck in interface net.imglib2.Positionable

move

public void move(int distance,
 int d)

Specified by:

move in interface net.imglib2.Positionable

move

public void move(long distance,
 int d)

Specified by:

move in interface net.imglib2.Positionable

move

public void move(net.imglib2.Localizable localizable)

Specified by:

move in interface net.imglib2.Positionable

move

public void move(int[] distance)

Specified by:

move in interface net.imglib2.Positionable

move

public void move(long[] distance)

Specified by:

move in interface net.imglib2.Positionable

setPosition

public void setPosition(net.imglib2.Localizable localizable)

Specified by:

setPosition in interface net.imglib2.Positionable

setPosition

public void setPosition(int[] pos)

Specified by:

setPosition in interface net.imglib2.Positionable

setPosition

public void setPosition(long[] pos)

Specified by:

setPosition in interface net.imglib2.Positionable

setPosition

public void setPosition(int pos,
 int d)

Specified by:

setPosition in interface net.imglib2.Positionable

setPosition

public void setPosition(long pos,
 int d)

Specified by:

setPosition in interface net.imglib2.Positionable