Package net.preibisch.mvrecon.process.fusion.lazy

Class LazyNonRigidFusion<T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>>

java.lang.Object

net.preibisch.mvrecon.process.fusion.lazy.LazyNonRigidFusion<T>

All Implemented Interfaces:

Consumer<net.imglib2.RandomAccessibleInterval<T>>

public class LazyNonRigidFusion<T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>>
extends Object
implements Consumer<net.imglib2.RandomAccessibleInterval<T>>

Constructor Summary

Constructors

Constructor

Description

LazyNonRigidFusion(net.imglib2.converter.Converter<net.imglib2.type.numeric.real.FloatType,T> converter, mpicbg.spim.data.generic.sequence.BasicImgLoader imgloader, Map<mpicbg.spim.data.sequence.ViewId,net.imglib2.realtransform.AffineTransform3D> viewRegistrations, Map<mpicbg.spim.data.sequence.ViewId,ViewInterestPointLists> viewInterestPoints, Map<mpicbg.spim.data.sequence.ViewId,? extends mpicbg.spim.data.generic.sequence.BasicViewDescription<?>> viewDescriptions, Collection<? extends mpicbg.spim.data.sequence.ViewId> viewsToFuse, Collection<? extends mpicbg.spim.data.sequence.ViewId> viewsToUse, List<String> labels, FusionGUI.FusionType fusionType, boolean displayDistances, long[] controlPointDistance, double alpha, boolean virtualGrid, int interpolation, Map<? extends mpicbg.spim.data.sequence.ViewId,mpicbg.models.AffineModel1D> intensityAdjustments, ExecutorService service, net.imglib2.Interval boundingBox, long[] globalMin, T type)

Method Summary

Modifier and Type	Method	Description
void	accept(net.imglib2.RandomAccessibleInterval<T> output)
static final <T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>> net.imglib2.RandomAccessibleInterval<T>	init(net.imglib2.converter.Converter<net.imglib2.type.numeric.real.FloatType,T> converter, mpicbg.spim.data.generic.sequence.BasicImgLoader imgloader, Map<mpicbg.spim.data.sequence.ViewId,net.imglib2.realtransform.AffineTransform3D> viewRegistrations, Map<mpicbg.spim.data.sequence.ViewId,ViewInterestPointLists> viewInterestPoints, Map<mpicbg.spim.data.sequence.ViewId,? extends mpicbg.spim.data.generic.sequence.BasicViewDescription<?>> viewDescriptions, Collection<? extends mpicbg.spim.data.sequence.ViewId> viewsToFuse, Collection<? extends mpicbg.spim.data.sequence.ViewId> viewsToUse, List<String> labels, FusionGUI.FusionType fusionType, boolean displayDistances, long[] controlPointDistance, double alpha, boolean virtualGrid, int interpolation, Map<? extends mpicbg.spim.data.sequence.ViewId,mpicbg.models.AffineModel1D> intensityAdjustments, ExecutorService service, net.imglib2.Interval fusionInterval, T type, int[] blockSize)
static void	main(String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.function.Consumer

andThen

Constructor Details

LazyNonRigidFusion

public LazyNonRigidFusion(net.imglib2.converter.Converter<net.imglib2.type.numeric.real.FloatType,T> converter,
 mpicbg.spim.data.generic.sequence.BasicImgLoader imgloader,
 Map<mpicbg.spim.data.sequence.ViewId,net.imglib2.realtransform.AffineTransform3D> viewRegistrations,
 Map<mpicbg.spim.data.sequence.ViewId,ViewInterestPointLists> viewInterestPoints,
 Map<mpicbg.spim.data.sequence.ViewId,? extends mpicbg.spim.data.generic.sequence.BasicViewDescription<?>> viewDescriptions,
 Collection<? extends mpicbg.spim.data.sequence.ViewId> viewsToFuse,
 Collection<? extends mpicbg.spim.data.sequence.ViewId> viewsToUse,
 List<String> labels,
 FusionGUI.FusionType fusionType,
 boolean displayDistances,
 long[] controlPointDistance,
 double alpha,
 boolean virtualGrid,
 int interpolation,
 Map<? extends mpicbg.spim.data.sequence.ViewId,mpicbg.models.AffineModel1D> intensityAdjustments,
 ExecutorService service,
 net.imglib2.Interval boundingBox,
 long[] globalMin,
 T type)

Method Details

accept

public void accept(net.imglib2.RandomAccessibleInterval<T> output)

Specified by:

accept in interface Consumer<T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>>

init

public static final <T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>>
net.imglib2.RandomAccessibleInterval<T> init(net.imglib2.converter.Converter<net.imglib2.type.numeric.real.FloatType,T> converter,
 mpicbg.spim.data.generic.sequence.BasicImgLoader imgloader,
 Map<mpicbg.spim.data.sequence.ViewId,net.imglib2.realtransform.AffineTransform3D> viewRegistrations,
 Map<mpicbg.spim.data.sequence.ViewId,ViewInterestPointLists> viewInterestPoints,
 Map<mpicbg.spim.data.sequence.ViewId,? extends mpicbg.spim.data.generic.sequence.BasicViewDescription<?>> viewDescriptions,
 Collection<? extends mpicbg.spim.data.sequence.ViewId> viewsToFuse,
 Collection<? extends mpicbg.spim.data.sequence.ViewId> viewsToUse,
 List<String> labels,
 FusionGUI.FusionType fusionType,
 boolean displayDistances,
 long[] controlPointDistance,
 double alpha,
 boolean virtualGrid,
 int interpolation,
 Map<? extends mpicbg.spim.data.sequence.ViewId,mpicbg.models.AffineModel1D> intensityAdjustments,
 ExecutorService service,
 net.imglib2.Interval fusionInterval,
 T type,
 int[] blockSize)

main

public static void main(String[] args)
                 throws mpicbg.spim.data.SpimDataException

Throws:

mpicbg.spim.data.SpimDataException